RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 RAG1P15918 1043 aa10.99□□□□□ -0.65
RABGGTA-217ENST00000560521 DYNLL1P63167 89 aaKnown RBP10.99□□□□□ -0.65
RABGGTA-217ENST00000560521 FPGSQ05932 587 aa10.99□□□□□ -0.65
RABGGTA-217ENST00000560521 RAB3GAP1Q15042 981 aa10.99□□□□□ -0.65
RABGGTA-217ENST00000560521 ALDH1L2Q3SY69 923 aa10.99□□□□□ -0.65
RABGGTA-217ENST00000560521 TIFAQ96CG3 184 aa10.99□□□□□ -0.65
RABGGTA-217ENST00000560521 RPAP3Q9H6T3 665 aaPredicted RBP10.99□□□□□ -0.65
RABGGTA-217ENST00000560521 SNRKQ9NRH2 765 aa10.99□□□□□ -0.65
RABGGTA-217ENST00000560521 GRXCR1A8MXD5 290 aa10.98□□□□□ -0.65
RABGGTA-217ENST00000560521 CYP2E1P05181 493 aaPredicted RBP10.98□□□□□ -0.65
RABGGTA-217ENST00000560521 UQCRFS1P1P0C7P4 283 aa10.98□□□□□ -0.65
RABGGTA-217ENST00000560521 ERCC3P19447 782 aa10.98□□□□□ -0.65
RABGGTA-217ENST00000560521 HOXD11P31277 338 aaPredicted RBP10.98□□□□□ -0.65
RABGGTA-217ENST00000560521 GUCY1A2P33402 732 aa10.98□□□□□ -0.65
RABGGTA-217ENST00000560521 PBX2P40425 430 aa10.98□□□□□ -0.65
RABGGTA-217ENST00000560521 FAAP100Q0VG06 881 aa10.98□□□□□ -0.65
RABGGTA-217ENST00000560521 AKNAD1Q5T1N1 836 aa10.98□□□□□ -0.65
RABGGTA-217ENST00000560521 C16orf59Q7L2K0 433 aa10.98□□□□□ -0.65
RABGGTA-217ENST00000560521 MAML3Q96JK9 1138 aa10.98□□□□□ -0.65
RABGGTA-217ENST00000560521 UHRF1Q96T88 793 aaPredicted RBP10.98□□□□□ -0.65
RABGGTA-217ENST00000560521 GAS2L1Q99501 681 aaPredicted RBP10.98□□□□□ -0.65
RABGGTA-217ENST00000560521 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.98□□□□□ -0.655e-9■■■□□ 16.1
RABGGTA-217ENST00000560521 PBX4Q9BYU1 374 aa10.98□□□□□ -0.65
RABGGTA-217ENST00000560521 SPATC1LQ9H0A9 340 aa10.98□□□□□ -0.65
RABGGTA-217ENST00000560521 PRDM12Q9H4Q4 367 aa10.98□□□□□ -0.65
RABGGTA-217ENST00000560521 TMEM39AQ9NV64 488 aa10.98□□□□□ -0.65
RABGGTA-217ENST00000560521 THEGQ9P2T0 379 aa10.98□□□□□ -0.65
RABGGTA-217ENST00000560521 HDAC5Q9UQL6 1122 aa10.98□□□□□ -0.65
RABGGTA-217ENST00000560521 BDP1A6H8Y1 2624 aa10.97□□□□□ -0.65
RABGGTA-217ENST00000560521 A0A1W2PQ45 241 aaPredicted RBP10.97□□□□□ -0.65
RABGGTA-217ENST00000560521 A0A1W2PQY0 241 aa10.97□□□□□ -0.65
RABGGTA-217ENST00000560521 PQBP1O60828 265 aaKnown RBP10.97□□□□□ -0.65
RABGGTA-217ENST00000560521 MRPS5P82675 430 aaKnown RBP10.97□□□□□ -0.65
RABGGTA-217ENST00000560521 MTX1Q13505 466 aa10.97□□□□□ -0.65
RABGGTA-217ENST00000560521 ADGRE1Q14246 886 aa10.97□□□□□ -0.65
RABGGTA-217ENST00000560521 COG2Q14746 738 aa10.97□□□□□ -0.65
RABGGTA-217ENST00000560521 CCDC85BQ15834 202 aaPredicted RBP10.97□□□□□ -0.65
RABGGTA-217ENST00000560521 ABCB5Q2M3G0 1257 aa10.97□□□□□ -0.65
RABGGTA-217ENST00000560521 CERKLQ49MI3 558 aaPredicted RBP10.97□□□□□ -0.65
RABGGTA-217ENST00000560521 ATF7IPQ6VMQ6 1270 aa10.97□□□□□ -0.65
RABGGTA-217ENST00000560521 FAM9BQ8IZU0 186 aa10.97□□□□□ -0.65
RABGGTA-217ENST00000560521 SHCBP1Q8NEM2 672 aa10.97□□□□□ -0.65
RABGGTA-217ENST00000560521 HOXC10Q9NYD6 342 aa10.97□□□□□ -0.65
RABGGTA-217ENST00000560521 SERPINB13Q9UIV8 391 aa10.97□□□□□ -0.65
RABGGTA-217ENST00000560521 NOB1Q9ULX3 412 aaKnown RBP10.97□□□□□ -0.65
RABGGTA-217ENST00000560521 CHD9Q3L8U1 2897 aa10.97□□□□□ -0.65
RABGGTA-217ENST00000560521 PRRC2BQ5JSZ5 2229 aaKnown RBP10.96□□□□□ -0.65
RABGGTA-217ENST00000560521 A0A1W2PRG0 241 aa10.96□□□□□ -0.65
RABGGTA-217ENST00000560521 PGK1P00558 417 aa10.96□□□□□ -0.65
RABGGTA-217ENST00000560521 TIMP1P01033 207 aa10.96□□□□□ -0.65
RABGGTA-217ENST00000560521 SHMT1P34896 483 aa10.96□□□□□ -0.65
RABGGTA-217ENST00000560521 TMEM240Q5SV17 173 aa10.96□□□□□ -0.65
RABGGTA-217ENST00000560521 ANKRD33Q7Z3H0 272 aa10.96□□□□□ -0.65
RABGGTA-217ENST00000560521 SLC44A5Q8NCS7 719 aa10.96□□□□□ -0.65
RABGGTA-217ENST00000560521 TOX2Q96NM4 488 aa10.96□□□□□ -0.65
RABGGTA-217ENST00000560521 EHD4Q9H223 541 aa10.96□□□□□ -0.65
RABGGTA-217ENST00000560521 XPNPEP3Q9NQH7 507 aa10.96□□□□□ -0.65
RABGGTA-217ENST00000560521 SMC4Q9NTJ3 1288 aa10.96□□□□□ -0.65
RABGGTA-217ENST00000560521 SLC5A4Q9NY91 659 aa10.96□□□□□ -0.65
RABGGTA-217ENST00000560521 XIRP2A4UGR9 3374 aa10.96□□□□□ -0.66
RABGGTA-217ENST00000560521 SCN5AQ14524 2016 aa10.96□□□□□ -0.66
RABGGTA-217ENST00000560521 CHD7Q9P2D1 2997 aa10.95□□□□□ -0.66
RABGGTA-217ENST00000560521 RARBP10826 455 aa10.95□□□□□ -0.66
RABGGTA-217ENST00000560521 TAL1P17542 331 aaPredicted RBP10.95□□□□□ -0.66
RABGGTA-217ENST00000560521 SLFN5Q08AF3 891 aa10.95□□□□□ -0.66
RABGGTA-217ENST00000560521 KIAA1755Q5JYT7 1200 aa10.95□□□□□ -0.66
RABGGTA-217ENST00000560521 RASIP1Q5U651 963 aa10.95□□□□□ -0.66
RABGGTA-217ENST00000560521 RNF180Q86T96 592 aa10.95□□□□□ -0.66
RABGGTA-217ENST00000560521 NCAPG2Q86XI2 1143 aa10.95□□□□□ -0.66
RABGGTA-217ENST00000560521 ABRAQ8N0Z2 381 aa10.95□□□□□ -0.66
RABGGTA-217ENST00000560521 NECAB3Q96P71 396 aaPredicted RBP10.95□□□□□ -0.66
RABGGTA-217ENST00000560521 MROH8Q9H579 483 aa10.95□□□□□ -0.66
RABGGTA-217ENST00000560521 CABP5Q9NP86 173 aa10.95□□□□□ -0.66
RABGGTA-217ENST00000560521 PIH1D3Q9NQM4 214 aaKnown RBP10.95□□□□□ -0.66
RABGGTA-217ENST00000560521 MYH4Q9Y623 1939 aa10.94□□□□□ -0.66
RABGGTA-217ENST00000560521 DCDC2CA8MYV0 355 aa10.94□□□□□ -0.66
RABGGTA-217ENST00000560521 E9PSI1 815 aa10.94□□□□□ -0.66
RABGGTA-217ENST00000560521 ADAMTS4O75173 837 aa10.94□□□□□ -0.66
RABGGTA-217ENST00000560521 ZNF865P0CJ78 1059 aaPredicted RBP10.94□□□□□ -0.66
RABGGTA-217ENST00000560521 BMP1P13497 986 aa10.94□□□□□ -0.66
RABGGTA-217ENST00000560521 CYP7A1P22680 504 aa10.94□□□□□ -0.66
RABGGTA-217ENST00000560521 DSG3P32926 999 aa10.94□□□□□ -0.66
RABGGTA-217ENST00000560521 ZAP70P43403 619 aa10.94□□□□□ -0.66
RABGGTA-217ENST00000560521 USP5P45974 858 aa10.94□□□□□ -0.66
RABGGTA-217ENST00000560521 PLCD1P51178 756 aa10.94□□□□□ -0.66
RABGGTA-217ENST00000560521 G3BP1Q13283 466 aaKnown RBP eCLIP10.94□□□□□ -0.66
RABGGTA-217ENST00000560521 PLS1Q14651 629 aa10.94□□□□□ -0.66
RABGGTA-217ENST00000560521 SEPT2Q15019 361 aa10.94□□□□□ -0.66
RABGGTA-217ENST00000560521 TTC39AQ5SRH9 613 aa10.94□□□□□ -0.66
RABGGTA-217ENST00000560521 MFSD5Q6N075 450 aa10.94□□□□□ -0.66
RABGGTA-217ENST00000560521 CCDC129Q6ZRS4 1044 aa10.94□□□□□ -0.66
RABGGTA-217ENST00000560521 MIGA1Q8NAN2 632 aa10.94□□□□□ -0.66
RABGGTA-217ENST00000560521 DBNDD2Q9BQY9 259 aa10.94□□□□□ -0.66
RABGGTA-217ENST00000560521 TINF2Q9BSI4 451 aa10.94□□□□□ -0.66
RABGGTA-217ENST00000560521 NRBP1Q9UHY1 535 aa10.94□□□□□ -0.66
RABGGTA-217ENST00000560521 TBX21Q9UL17 535 aa10.94□□□□□ -0.66
RABGGTA-217ENST00000560521 LRRC37A2A6NM11 1700 aa10.93□□□□□ -0.66
RABGGTA-217ENST00000560521 PNMA6EA0A0J9YXQ4 647 aa10.93□□□□□ -0.66
RABGGTA-217ENST00000560521 ACRP10323 421 aa10.93□□□□□ -0.66
RABGGTA-217ENST00000560521 FCER1AP12319 257 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms