RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 STK11IPQ8N1F8 1099 aa16.51■□□□□ 0.23
PKNOX1-209ENST00000560448 ACER1Q8TDN7 264 aa16.51■□□□□ 0.23
PKNOX1-209ENST00000560448 SMCR8Q8TEV9 937 aaPredicted RBP16.51■□□□□ 0.23
PKNOX1-209ENST00000560448 CEP95Q96GE4 821 aa16.51■□□□□ 0.23
PKNOX1-209ENST00000560448 LSG1Q9H089 658 aaKnown RBP16.51■□□□□ 0.23
PKNOX1-209ENST00000560448 A0A1W2PRG0 241 aa16.5■□□□□ 0.23
PKNOX1-209ENST00000560448 FKTNO75072 461 aa16.5■□□□□ 0.23
PKNOX1-209ENST00000560448 VCAM1P19320 739 aa16.5■□□□□ 0.23
PKNOX1-209ENST00000560448 LBX1P52954 281 aa16.5■□□□□ 0.23
PKNOX1-209ENST00000560448 PTH1RQ03431 593 aa16.5■□□□□ 0.23
PKNOX1-209ENST00000560448 SIAH1Q8IUQ4 282 aa16.5■□□□□ 0.23
PKNOX1-209ENST00000560448 TBC1D10CQ8IV04 446 aa16.5■□□□□ 0.23
PKNOX1-209ENST00000560448 GMCL1P1Q8NEA9 526 aa16.5■□□□□ 0.23
PKNOX1-209ENST00000560448 NBPF3Q9H094 633 aa16.5■□□□□ 0.23
PKNOX1-209ENST00000560448 MYPNQ86TC9 1320 aa16.5■□□□□ 0.23
PKNOX1-209ENST00000560448 CYP21A2P08686 494 aa16.49■□□□□ 0.23
PKNOX1-209ENST00000560448 SP3Q02447 781 aa16.49■□□□□ 0.23
PKNOX1-209ENST00000560448 TREML2Q5T2D2 321 aa16.49■□□□□ 0.23
PKNOX1-209ENST00000560448 C17orf99Q6UX52 265 aa16.49■□□□□ 0.23
PKNOX1-209ENST00000560448 LBX2Q6XYB7 198 aa16.49■□□□□ 0.23
PKNOX1-209ENST00000560448 DGKHQ86XP1 1220 aa16.49■□□□□ 0.23
PKNOX1-209ENST00000560448 ERO1AQ96HE7 468 aa16.49■□□□□ 0.23
PKNOX1-209ENST00000560448 RBM8AQ9Y5S9 174 aaKnown RBP16.49■□□□□ 0.23
PKNOX1-209ENST00000560448 ADGRA2Q96PE1 1338 aa16.49■□□□□ 0.23
PKNOX1-209ENST00000560448 GNRH1P01148 92 aa16.48■□□□□ 0.23
PKNOX1-209ENST00000560448 ATP2B2Q01814 1243 aa16.48■□□□□ 0.23
PKNOX1-209ENST00000560448 FAM47AQ5JRC9 791 aa16.48■□□□□ 0.23
PKNOX1-209ENST00000560448 RRP12Q5JTH9 1297 aaKnown RBP16.48■□□□□ 0.23
PKNOX1-209ENST00000560448 CATSPERGQ6ZRH7 1159 aa16.48■□□□□ 0.23
PKNOX1-209ENST00000560448 NCOA7Q8NI08 942 aa16.48■□□□□ 0.23
PKNOX1-209ENST00000560448 MTA3Q9BTC8 594 aa16.48■□□□□ 0.23
PKNOX1-209ENST00000560448 ASCC2Q9H1I8 757 aaPredicted RBP16.48■□□□□ 0.23
PKNOX1-209ENST00000560448 HOXC10Q9NYD6 342 aa16.48■□□□□ 0.23
PKNOX1-209ENST00000560448 CLIP2Q9UDT6 1046 aa16.48■□□□□ 0.23
PKNOX1-209ENST00000560448 STX8Q9UNK0 236 aa16.48■□□□□ 0.23
PKNOX1-209ENST00000560448 KIF22Q14807 665 aa16.47■□□□□ 0.23
PKNOX1-209ENST00000560448 NECTIN1Q15223 517 aa16.47■□□□□ 0.23
PKNOX1-209ENST00000560448 ZYXQ15942 572 aaKnown RBP16.47■□□□□ 0.23
PKNOX1-209ENST00000560448 FAM110CQ1W6H9 321 aa16.47■□□□□ 0.23
PKNOX1-209ENST00000560448 RALYLQ86SE5 291 aaKnown RBP16.47■□□□□ 0.23
PKNOX1-209ENST00000560448 ZNF296Q8WUU4 475 aaPredicted RBP16.47■□□□□ 0.23
PKNOX1-209ENST00000560448 NEDD4P46934 1319 aa16.47■□□□□ 0.23
PKNOX1-209ENST00000560448 MYH4Q9Y623 1939 aa16.47■□□□□ 0.23
PKNOX1-209ENST00000560448 F5H6K3 240 aa16.46■□□□□ 0.23
PKNOX1-209ENST00000560448 ZKSCAN1P17029 563 aaPredicted RBP16.46■□□□□ 0.23
PKNOX1-209ENST00000560448 KLRC3Q07444 240 aa16.46■□□□□ 0.23
PKNOX1-209ENST00000560448 KRT32Q14532 448 aa16.46■□□□□ 0.23
PKNOX1-209ENST00000560448 COG2Q14746 738 aa16.46■□□□□ 0.23
PKNOX1-209ENST00000560448 SART3Q15020 963 aaKnown RBP16.46■□□□□ 0.23
PKNOX1-209ENST00000560448 PKN2Q16513 984 aaKnown RBP16.46■□□□□ 0.23
PKNOX1-209ENST00000560448 TSGA10IPQ3SY00 556 aa16.46■□□□□ 0.23
PKNOX1-209ENST00000560448 RCSD1Q6JBY9 416 aa16.46■□□□□ 0.23
PKNOX1-209ENST00000560448 MB21D1Q8N884 522 aa16.46■□□□□ 0.23
PKNOX1-209ENST00000560448 GMCL1Q96IK5 515 aa16.46■□□□□ 0.23
PKNOX1-209ENST00000560448 RPAP3Q9H6T3 665 aaPredicted RBP16.46■□□□□ 0.23
PKNOX1-209ENST00000560448 IL17RBQ9NRM6 502 aa16.46■□□□□ 0.23
PKNOX1-209ENST00000560448 TSKSQ9UJT2 592 aa16.46■□□□□ 0.23
PKNOX1-209ENST00000560448 KDM4AO75164 1064 aa16.45■□□□□ 0.22
PKNOX1-209ENST00000560448 CYP2C8P10632 490 aa16.45■□□□□ 0.22
PKNOX1-209ENST00000560448 BCRP11274 1271 aa16.45■□□□□ 0.22
PKNOX1-209ENST00000560448 TOP1P11387 765 aaKnown RBP16.45■□□□□ 0.22
PKNOX1-209ENST00000560448 HERVK_113P62684 666 aa16.45■□□□□ 0.22
PKNOX1-209ENST00000560448 CLEC10AQ8IUN9 316 aa16.45■□□□□ 0.22
PKNOX1-209ENST00000560448 UBAC1Q9BSL1 405 aa16.45■□□□□ 0.22
PKNOX1-209ENST00000560448 TACC3Q9Y6A5 838 aa16.45■□□□□ 0.22
PKNOX1-209ENST00000560448 B4E1Z4 1266 aa16.45■□□□□ 0.22
PKNOX1-209ENST00000560448 E7EWF7 191 aa16.45■□□□□ 0.22
PKNOX1-209ENST00000560448 FDX1P10109 184 aa16.45■□□□□ 0.22
PKNOX1-209ENST00000560448 CREB3L3Q68CJ9 461 aa16.45■□□□□ 0.22
PKNOX1-209ENST00000560448 ANKS1AQ92625 1134 aa16.45■□□□□ 0.22
PKNOX1-209ENST00000560448 TANGO6Q9C0B7 1094 aa16.45■□□□□ 0.22
PKNOX1-209ENST00000560448 INCENPQ9NQS7 918 aa16.45■□□□□ 0.22
PKNOX1-209ENST00000560448 ZSWIM5Q9P217 1185 aa16.45■□□□□ 0.22
PKNOX1-209ENST00000560448 MORF4L1Q9UBU8 362 aa16.45■□□□□ 0.22
PKNOX1-209ENST00000560448 ERICH2A1L162 156 aa16.44■□□□□ 0.22
PKNOX1-209ENST00000560448 SLC27A2O14975 620 aa16.44■□□□□ 0.22
PKNOX1-209ENST00000560448 PLA2G6O60733 806 aa16.44■□□□□ 0.22
PKNOX1-209ENST00000560448 NDUFB10O96000 172 aa16.44■□□□□ 0.22
PKNOX1-209ENST00000560448 PRMT2P55345 433 aa16.44■□□□□ 0.22
PKNOX1-209ENST00000560448 LACTBP83111 547 aaPredicted RBP16.44■□□□□ 0.22
PKNOX1-209ENST00000560448 DGKZQ13574 1117 aa16.44■□□□□ 0.22
PKNOX1-209ENST00000560448 COL13A1Q5TAT6 717 aaPredicted RBP16.44■□□□□ 0.22
PKNOX1-209ENST00000560448 ZSCAN10Q96SZ4 725 aaPredicted RBP16.44■□□□□ 0.22
PKNOX1-209ENST00000560448 R3HDMLQ9H3Y0 253 aa16.44■□□□□ 0.22
PKNOX1-209ENST00000560448 RABGAP1Q9Y3P9 1069 aa16.44■□□□□ 0.22
PKNOX1-209ENST00000560448 HMGB1P09429 215 aaKnown RBP16.43■□□□□ 0.22
PKNOX1-209ENST00000560448 SLC1A4P43007 532 aa16.43■□□□□ 0.22
PKNOX1-209ENST00000560448 CCNA1P78396 465 aa16.43■□□□□ 0.22
PKNOX1-209ENST00000560448 CTU1Q7Z7A3 348 aaKnown RBP16.43■□□□□ 0.22
PKNOX1-209ENST00000560448 SPICE1Q8N0Z3 855 aa16.43■□□□□ 0.22
PKNOX1-209ENST00000560448 GPRC5AQ8NFJ5 357 aa16.43■□□□□ 0.22
PKNOX1-209ENST00000560448 DCAF4Q8WV16 495 aa16.43■□□□□ 0.22
PKNOX1-209ENST00000560448 P2RX7Q99572 595 aaKnown RBP16.43■□□□□ 0.22
PKNOX1-209ENST00000560448 CPA4Q9UI42 421 aa16.43■□□□□ 0.22
PKNOX1-209ENST00000560448 FEM1BQ9UK73 627 aa16.43■□□□□ 0.22
PKNOX1-209ENST00000560448 TNKSO95271 1327 aa16.42■□□□□ 0.22
PKNOX1-209ENST00000560448 WDR19Q8NEZ3 1342 aa16.42■□□□□ 0.22
PKNOX1-209ENST00000560448 SPDYE16A6NNV3 312 aaPredicted RBP16.42■□□□□ 0.22
PKNOX1-209ENST00000560448 NMT2O60551 498 aa16.42■□□□□ 0.22
PKNOX1-209ENST00000560448 FLOT1O75955 427 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms