RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 RCOR1Q9UKL0 485 aa12.57□□□□□ -0.4
SNRPA1-211ENST00000560433 PCDHA7Q9UN72 937 aa12.57□□□□□ -0.4
SNRPA1-211ENST00000560433 ZNF445P59923 1031 aa12.57□□□□□ -0.4
SNRPA1-211ENST00000560433 HOMER1Q86YM7 354 aa12.57□□□□□ -0.4
SNRPA1-211ENST00000560433 LINC00301Q8NCQ3 95 aa12.57□□□□□ -0.4
SNRPA1-211ENST00000560433 JDP2Q8WYK2 163 aa12.57□□□□□ -0.4
SNRPA1-211ENST00000560433 RBSNQ9H1K0 784 aa12.57□□□□□ -0.4
SNRPA1-211ENST00000560433 GOLPH3LQ9H4A5 285 aa12.57□□□□□ -0.4
SNRPA1-211ENST00000560433 MTMR4Q9NYA4 1195 aa12.57□□□□□ -0.4
SNRPA1-211ENST00000560433 MYH8P13535 1937 aa12.56□□□□□ -0.4
SNRPA1-211ENST00000560433 SPDYE2BA6NHP3 402 aa12.56□□□□□ -0.4
SNRPA1-211ENST00000560433 SPDYE6P0CI01 402 aa12.56□□□□□ -0.4
SNRPA1-211ENST00000560433 U2AF2P26368 475 aaKnown RBP eCLIP12.56□□□□□ -0.42e-7■■■□□ 14.8
SNRPA1-211ENST00000560433 HDLBPQ00341 1268 aaKnown RBP12.56□□□□□ -0.4
SNRPA1-211ENST00000560433 DLGAP5Q15398 846 aa12.56□□□□□ -0.4
SNRPA1-211ENST00000560433 NBPF9Q3BBW0 867 aa12.56□□□□□ -0.4
SNRPA1-211ENST00000560433 BRAPQ7Z569 592 aa12.56□□□□□ -0.4
SNRPA1-211ENST00000560433 CKAP2LQ8IYA6 745 aa12.56□□□□□ -0.4
SNRPA1-211ENST00000560433 GMLQ99445 158 aa12.56□□□□□ -0.4
SNRPA1-211ENST00000560433 MRIQ9BWK5 157 aa12.56□□□□□ -0.4
SNRPA1-211ENST00000560433 IDI2Q9BXS1 227 aa12.56□□□□□ -0.4
SNRPA1-211ENST00000560433 CABP5Q9NP86 173 aa12.56□□□□□ -0.4
SNRPA1-211ENST00000560433 KIF5BP33176 963 aa12.56□□□□□ -0.4
SNRPA1-211ENST00000560433 PPP2R5BQ15173 497 aa12.56□□□□□ -0.4
SNRPA1-211ENST00000560433 CCDC183Q5T5S1 534 aa12.56□□□□□ -0.4
SNRPA1-211ENST00000560433 ANO1Q5XXA6 986 aa12.56□□□□□ -0.4
SNRPA1-211ENST00000560433 LRSAM1Q6UWE0 723 aa12.56□□□□□ -0.4
SNRPA1-211ENST00000560433 NOSTRINQ8IVI9 506 aa12.56□□□□□ -0.4
SNRPA1-211ENST00000560433 CCAR1Q8IX12 1150 aaKnown RBP12.56□□□□□ -0.4
SNRPA1-211ENST00000560433 ERCC4Q92889 916 aaPredicted RBP12.56□□□□□ -0.4
SNRPA1-211ENST00000560433 RTEL1Q9NZ71 1219 aa12.56□□□□□ -0.4
SNRPA1-211ENST00000560433 ISY1Q9ULR0 285 aaKnown RBP12.56□□□□□ -0.4
SNRPA1-211ENST00000560433 MRVI1Q9Y6F6 885 aa12.56□□□□□ -0.4
SNRPA1-211ENST00000560433 A0A1B0GVL5 298 aa12.55□□□□□ -0.4
SNRPA1-211ENST00000560433 KLRF2D3W0D1 207 aa12.55□□□□□ -0.4
SNRPA1-211ENST00000560433 TOB1P50616 345 aaPredicted RBP12.55□□□□□ -0.4
SNRPA1-211ENST00000560433 JAG1P78504 1218 aa12.55□□□□□ -0.4
SNRPA1-211ENST00000560433 GRM4Q14833 912 aa12.55□□□□□ -0.4
SNRPA1-211ENST00000560433 SAFBQ15424 915 aaKnown RBP eCLIP12.55□□□□□ -0.4
SNRPA1-211ENST00000560433 TYW1BQ6NUM6 668 aa12.55□□□□□ -0.4
SNRPA1-211ENST00000560433 ANKS1AQ92625 1134 aa12.55□□□□□ -0.4
SNRPA1-211ENST00000560433 SYAP1Q96A49 352 aaPredicted RBP12.55□□□□□ -0.4
SNRPA1-211ENST00000560433 CSRNP1Q96S65 589 aa12.55□□□□□ -0.4
SNRPA1-211ENST00000560433 TRIM34Q9BYJ4 488 aa12.55□□□□□ -0.4
SNRPA1-211ENST00000560433 PI4KBQ9UBF8 816 aa12.55□□□□□ -0.4
SNRPA1-211ENST00000560433 GJA3Q9Y6H8 435 aa12.55□□□□□ -0.4
SNRPA1-211ENST00000560433 WNT7AO00755 349 aa12.54□□□□□ -0.4
SNRPA1-211ENST00000560433 SPTLC2O15270 562 aa12.54□□□□□ -0.4
SNRPA1-211ENST00000560433 RRP1BQ14684 758 aaKnown RBP12.54□□□□□ -0.4
SNRPA1-211ENST00000560433 CERKLQ49MI3 558 aaPredicted RBP12.54□□□□□ -0.4
SNRPA1-211ENST00000560433 GRIPAP1Q4V328 841 aa12.54□□□□□ -0.4
SNRPA1-211ENST00000560433 SPECC1Q5M775 1068 aa12.54□□□□□ -0.4
SNRPA1-211ENST00000560433 MIGA2Q7L4E1 593 aa12.54□□□□□ -0.4
SNRPA1-211ENST00000560433 RASGRP4Q8TDF6 673 aa12.54□□□□□ -0.4
SNRPA1-211ENST00000560433 CLIC6Q96NY7 704 aa12.54□□□□□ -0.4
SNRPA1-211ENST00000560433 PHF20Q9BVI0 1012 aa12.54□□□□□ -0.4
SNRPA1-211ENST00000560433 TMEM39BQ9GZU3 492 aa12.54□□□□□ -0.4
SNRPA1-211ENST00000560433 GPCPD1Q9NPB8 672 aa12.54□□□□□ -0.4
SNRPA1-211ENST00000560433 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.54□□□□□ -0.4
SNRPA1-211ENST00000560433 PCDHB6Q9Y5E3 794 aa12.54□□□□□ -0.4
SNRPA1-211ENST00000560433 SIPA1L1O43166 1804 aa12.54□□□□□ -0.4
SNRPA1-211ENST00000560433 BRCA1P38398 1863 aaKnown RBP12.54□□□□□ -0.4
SNRPA1-211ENST00000560433 TOP1P11387 765 aaKnown RBP12.54□□□□□ -0.4
SNRPA1-211ENST00000560433 SCG2P13521 617 aa12.54□□□□□ -0.4
SNRPA1-211ENST00000560433 SOGA3Q5TF21 947 aa12.54□□□□□ -0.4
SNRPA1-211ENST00000560433 CIAPIN1Q6FI81 312 aa12.54□□□□□ -0.4
SNRPA1-211ENST00000560433 ZNF70Q9UC06 446 aaPredicted RBP12.54□□□□□ -0.4
SNRPA1-211ENST00000560433 HDAC9Q9UKV0 1011 aa12.54□□□□□ -0.4
SNRPA1-211ENST00000560433 A0A087WWV3 80 aa12.53□□□□□ -0.4
SNRPA1-211ENST00000560433 PALM3A6NDB9 673 aaPredicted RBP12.53□□□□□ -0.4
SNRPA1-211ENST00000560433 PARP1P09874 1014 aaKnown RBP12.53□□□□□ -0.4
SNRPA1-211ENST00000560433 NLRP5P59047 1200 aa12.53□□□□□ -0.4
SNRPA1-211ENST00000560433 SEPT2Q15019 361 aa12.53□□□□□ -0.4
SNRPA1-211ENST00000560433 NPY5RQ15761 445 aa12.53□□□□□ -0.4
SNRPA1-211ENST00000560433 HEATR3Q7Z4Q2 680 aa12.53□□□□□ -0.4
SNRPA1-211ENST00000560433 DHX36Q9H2U1 1008 aaKnown RBP12.53□□□□□ -0.4
SNRPA1-211ENST00000560433 POLR3EQ9NVU0 708 aa12.53□□□□□ -0.4
SNRPA1-211ENST00000560433 SWAP70Q9UH65 585 aa12.53□□□□□ -0.4
SNRPA1-211ENST00000560433 CD2APQ9Y5K6 639 aa12.53□□□□□ -0.4
SNRPA1-211ENST00000560433 WNT10BO00744 389 aa12.53□□□□□ -0.4
SNRPA1-211ENST00000560433 TTLL1O95922 423 aa12.53□□□□□ -0.4
SNRPA1-211ENST00000560433 PDHBP11177 359 aa12.53□□□□□ -0.4
SNRPA1-211ENST00000560433 XBP1P17861 261 aa12.53□□□□□ -0.4
SNRPA1-211ENST00000560433 SLC16A2P36021 539 aa12.53□□□□□ -0.4
SNRPA1-211ENST00000560433 MRE11P49959 708 aa12.53□□□□□ -0.4
SNRPA1-211ENST00000560433 PFKFB3Q16875 520 aaPredicted RBP12.53□□□□□ -0.4
SNRPA1-211ENST00000560433 CCDC178Q5BJE1 867 aa12.53□□□□□ -0.4
SNRPA1-211ENST00000560433 L1TD1Q5T7N2 865 aaKnown RBP12.53□□□□□ -0.4
SNRPA1-211ENST00000560433 TTBK2Q6IQ55 1244 aa12.53□□□□□ -0.4
SNRPA1-211ENST00000560433 KCTD1Q719H9 257 aa12.53□□□□□ -0.4
SNRPA1-211ENST00000560433 SAMD7Q7Z3H4 446 aa12.53□□□□□ -0.4
SNRPA1-211ENST00000560433 FSIP1Q8NA03 581 aa12.53□□□□□ -0.4
SNRPA1-211ENST00000560433 MAP3K14Q99558 947 aa12.53□□□□□ -0.4
SNRPA1-211ENST00000560433 FER1L6Q2WGJ9 1857 aa12.53□□□□□ -0.4
SNRPA1-211ENST00000560433 ASTN2O75129 1339 aaPredicted RBP12.53□□□□□ -0.4
SNRPA1-211ENST00000560433 IGKV6D-41A0A0C4DH26 115 aa12.52□□□□□ -0.4
SNRPA1-211ENST00000560433 KRT2P35908 639 aa12.52□□□□□ -0.4
SNRPA1-211ENST00000560433 NASPP49321 788 aaPredicted RBP12.52□□□□□ -0.4
SNRPA1-211ENST00000560433 GRIN1Q05586 938 aa12.52□□□□□ -0.4
SNRPA1-211ENST00000560433 WWC2Q6AWC2 1192 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms