RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 LPAR1Q92633 364 aa16.34■□□□□ 0.21
SMAD3-214ENST00000560402 DDRGK1Q96HY6 314 aa16.34■□□□□ 0.21
SMAD3-214ENST00000560402 HAUS7Q99871 368 aa16.34■□□□□ 0.21
SMAD3-214ENST00000560402 MSCO60682 206 aa16.33■□□□□ 0.2
SMAD3-214ENST00000560402 PTPREP23469 700 aa16.33■□□□□ 0.2
SMAD3-214ENST00000560402 MNX1P50219 401 aaPredicted RBP16.33■□□□□ 0.2
SMAD3-214ENST00000560402 GRB14Q14449 540 aa16.33■□□□□ 0.2
SMAD3-214ENST00000560402 ZSCAN25Q6NSZ9 544 aa16.33■□□□□ 0.2
SMAD3-214ENST00000560402 MB21D1Q8N884 522 aa16.33■□□□□ 0.2
SMAD3-214ENST00000560402 CCDC17Q96LX7 622 aa16.33■□□□□ 0.2
SMAD3-214ENST00000560402 BOLA2Q9H3K6 86 aa16.33■□□□□ 0.2
SMAD3-214ENST00000560402 ARMT1Q9H993 441 aa16.33■□□□□ 0.2
SMAD3-214ENST00000560402 ARHGEF10LQ9HCE6 1279 aa16.33■□□□□ 0.2
SMAD3-214ENST00000560402 GREB1LQ9C091 1923 aaPredicted RBP16.33■□□□□ 0.2
SMAD3-214ENST00000560402 MBD4O95243 580 aa16.32■□□□□ 0.2
SMAD3-214ENST00000560402 UBE3CQ15386 1083 aa16.32■□□□□ 0.2
SMAD3-214ENST00000560402 CCL14Q16627 93 aa16.32■□□□□ 0.2
SMAD3-214ENST00000560402 WDR78Q5VTH9 848 aa16.32■□□□□ 0.2
SMAD3-214ENST00000560402 C7orf61Q8IZ16 206 aa16.32■□□□□ 0.2
SMAD3-214ENST00000560402 EDC3Q96F86 508 aaKnown RBP16.32■□□□□ 0.2
SMAD3-214ENST00000560402 LRRCC1Q9C099 1032 aa16.32■□□□□ 0.2
SMAD3-214ENST00000560402 HOXC10Q9NYD6 342 aa16.32■□□□□ 0.2
SMAD3-214ENST00000560402 BTBD7Q9P203 1132 aa16.32■□□□□ 0.2
SMAD3-214ENST00000560402 SZT2Q5T011 3432 aa16.32■□□□□ 0.2
SMAD3-214ENST00000560402 PFASO15067 1338 aa16.31■□□□□ 0.2
SMAD3-214ENST00000560402 CCND3P30281 292 aaPredicted RBP16.31■□□□□ 0.2
SMAD3-214ENST00000560402 BMP8BP34820 402 aa16.31■□□□□ 0.2
SMAD3-214ENST00000560402 ICA1Q05084 483 aa16.31■□□□□ 0.2
SMAD3-214ENST00000560402 COG2Q14746 738 aa16.31■□□□□ 0.2
SMAD3-214ENST00000560402 SHCBP1Q8NEM2 672 aa16.31■□□□□ 0.2
SMAD3-214ENST00000560402 GDF15Q99988 308 aa16.31■□□□□ 0.2
SMAD3-214ENST00000560402 TANGO6Q9C0B7 1094 aa16.31■□□□□ 0.2
SMAD3-214ENST00000560402 COL11A1P12107 1806 aaPredicted RBP16.31■□□□□ 0.2
SMAD3-214ENST00000560402 A0A1W2PRG0 241 aa16.3■□□□□ 0.2
SMAD3-214ENST00000560402 STRNO43815 780 aa16.3■□□□□ 0.2
SMAD3-214ENST00000560402 CYP2D6P10635 497 aa16.3■□□□□ 0.2
SMAD3-214ENST00000560402 COL6A1P12109 1028 aa16.3■□□□□ 0.2
SMAD3-214ENST00000560402 LHX8Q68G74 356 aa16.3■□□□□ 0.2
SMAD3-214ENST00000560402 SLC44A5Q8NCS7 719 aa16.3■□□□□ 0.2
SMAD3-214ENST00000560402 TMX2Q9Y320 296 aa16.3■□□□□ 0.2
SMAD3-214ENST00000560402 WDR46O15213 610 aaKnown RBP16.29■□□□□ 0.2
SMAD3-214ENST00000560402 ATP2B2Q01814 1243 aa16.29■□□□□ 0.2
SMAD3-214ENST00000560402 EVX2Q03828 476 aa16.29■□□□□ 0.2
SMAD3-214ENST00000560402 C12orf60Q5U649 245 aa16.29■□□□□ 0.2
SMAD3-214ENST00000560402 OLFML2BQ68BL8 750 aa16.29■□□□□ 0.2
SMAD3-214ENST00000560402 C16orf86Q6ZW13 317 aa16.29■□□□□ 0.2
SMAD3-214ENST00000560402 MOV10L1Q9BXT6 1211 aaKnown RBP16.29■□□□□ 0.2
SMAD3-214ENST00000560402 SPATC1LQ9H0A9 340 aa16.29■□□□□ 0.2
SMAD3-214ENST00000560402 VCPKMTQ9H867 229 aa16.29■□□□□ 0.2
SMAD3-214ENST00000560402 SLC5A4Q9NY91 659 aa16.29■□□□□ 0.2
SMAD3-214ENST00000560402 ARPP21Q9UBL0 812 aaPredicted RBP16.29■□□□□ 0.2
SMAD3-214ENST00000560402 PRKAB2O43741 272 aa16.28■□□□□ 0.2
SMAD3-214ENST00000560402 AKR1B1P15121 316 aa16.28■□□□□ 0.2
SMAD3-214ENST00000560402 DSG3P32926 999 aa16.28■□□□□ 0.2
SMAD3-214ENST00000560402 ABRAQ8N0Z2 381 aa16.28■□□□□ 0.2
SMAD3-214ENST00000560402 DYNLL2Q96FJ2 89 aa16.28■□□□□ 0.2
SMAD3-214ENST00000560402 GPATCH3Q96I76 525 aa16.28■□□□□ 0.2
SMAD3-214ENST00000560402 MROH8Q9H579 483 aa16.28■□□□□ 0.2
SMAD3-214ENST00000560402 FLRT1Q9NZU1 646 aa16.28■□□□□ 0.2
SMAD3-214ENST00000560402 STAP2Q9UGK3 403 aa16.28■□□□□ 0.2
SMAD3-214ENST00000560402 DDX20Q9UHI6 824 aaKnown RBP16.28■□□□□ 0.2
SMAD3-214ENST00000560402 ZMYND8Q9ULU4 1186 aaPredicted RBP16.28■□□□□ 0.2
SMAD3-214ENST00000560402 PLXNA1Q9UIW2 1896 aa16.27■□□□□ 0.2
SMAD3-214ENST00000560402 FLOT1O75955 427 aa16.27■□□□□ 0.2
SMAD3-214ENST00000560402 ADORA2AP29274 412 aa16.27■□□□□ 0.2
SMAD3-214ENST00000560402 CDK8P49336 464 aa16.27■□□□□ 0.2
SMAD3-214ENST00000560402 C20orf194Q5TEA3 1177 aa16.27■□□□□ 0.2
SMAD3-214ENST00000560402 NPLOC4Q8TAT6 608 aa16.27■□□□□ 0.2
SMAD3-214ENST00000560402 BCL11AQ9H165 835 aa16.27■□□□□ 0.2
SMAD3-214ENST00000560402 SLC4A4Q9Y6R1 1079 aa16.27■□□□□ 0.2
SMAD3-214ENST00000560402 ZNFX1Q9P2E3 1918 aaKnown RBP16.27■□□□□ 0.19
SMAD3-214ENST00000560402 ROBO3Q96MS0 1386 aa16.26■□□□□ 0.19
SMAD3-214ENST00000560402 MYH4Q9Y623 1939 aa16.26■□□□□ 0.19
SMAD3-214ENST00000560402 USP17L12C9JPN9 530 aa16.26■□□□□ 0.19
SMAD3-214ENST00000560402 USP17L21D6R901 530 aa16.26■□□□□ 0.19
SMAD3-214ENST00000560402 IGHA2P01877 340 aa16.26■□□□□ 0.19
SMAD3-214ENST00000560402 CYBAP13498 195 aa16.26■□□□□ 0.19
SMAD3-214ENST00000560402 ERCC3P19447 782 aa16.26■□□□□ 0.19
SMAD3-214ENST00000560402 GPR153Q6NV75 609 aa16.26■□□□□ 0.19
SMAD3-214ENST00000560402 GIMAP6Q6P9H5 292 aa16.26■□□□□ 0.19
SMAD3-214ENST00000560402 CENPQQ7L2Z9 268 aaPredicted RBP16.26■□□□□ 0.19
SMAD3-214ENST00000560402 DPP9Q86TI2 863 aa16.26■□□□□ 0.19
SMAD3-214ENST00000560402 KANSL2Q9H9L4 492 aa16.26■□□□□ 0.19
SMAD3-214ENST00000560402 ECHDC1Q9NTX5 307 aa16.26■□□□□ 0.19
SMAD3-214ENST00000560402 LAMA3Q16787 3333 aa16.26■□□□□ 0.19
SMAD3-214ENST00000560402 DNM1LO00429 736 aa16.25■□□□□ 0.19
SMAD3-214ENST00000560402 SLC25A27O95847 323 aa16.25■□□□□ 0.19
SMAD3-214ENST00000560402 MAGEA10P43363 369 aaPredicted RBP16.25■□□□□ 0.19
SMAD3-214ENST00000560402 CLEC10AQ8IUN9 316 aa16.25■□□□□ 0.19
SMAD3-214ENST00000560402 KBTBD3Q8NAB2 608 aa16.25■□□□□ 0.19
SMAD3-214ENST00000560402 ATG4CQ96DT6 458 aa16.25■□□□□ 0.19
SMAD3-214ENST00000560402 GOPCQ9HD26 462 aa16.25■□□□□ 0.19
SMAD3-214ENST00000560402 LTBP2Q14767 1821 aa16.24■□□□□ 0.19
SMAD3-214ENST00000560402 ZFYP08048 801 aaPredicted RBP16.24■□□□□ 0.19
SMAD3-214ENST00000560402 CNGA1P29973 690 aa16.24■□□□□ 0.19
SMAD3-214ENST00000560402 CYP2C19P33261 490 aa16.24■□□□□ 0.19
SMAD3-214ENST00000560402 COPB2P35606 906 aa16.24■□□□□ 0.19
SMAD3-214ENST00000560402 LRRC26Q2I0M4 334 aa16.24■□□□□ 0.19
SMAD3-214ENST00000560402 SLFNL1Q499Z3 407 aa16.24■□□□□ 0.19
SMAD3-214ENST00000560402 SBK1Q52WX2 424 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms