RNA–Protein interactions for RNA: ENST00000560353.1

APH1B-208, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1B, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-208ENST00000560353 MSRAQ9UJ68 235 aa12.77□□□□□ -0.37
APH1B-208ENST00000560353 MYH2Q9UKX2 1941 aa12.77□□□□□ -0.37
APH1B-208ENST00000560353 PDS5AQ29RF7 1337 aaKnown RBP12.77□□□□□ -0.37
APH1B-208ENST00000560353 FANCIQ9NVI1 1328 aa12.77□□□□□ -0.37
APH1B-208ENST00000560353 GRXCR1A8MXD5 290 aa12.76□□□□□ -0.37
APH1B-208ENST00000560353 DCDC2CA8MYV0 355 aa12.76□□□□□ -0.37
APH1B-208ENST00000560353 STRNO43815 780 aa12.76□□□□□ -0.37
APH1B-208ENST00000560353 GSTO1P78417 241 aa12.76□□□□□ -0.37
APH1B-208ENST00000560353 JAG1P78504 1218 aa12.76□□□□□ -0.37
APH1B-208ENST00000560353 EXOSC9Q06265 439 aaKnown RBP12.76□□□□□ -0.37
APH1B-208ENST00000560353 ATG9AQ7Z3C6 839 aa12.76□□□□□ -0.37
APH1B-208ENST00000560353 DHX36Q9H2U1 1008 aaKnown RBP12.76□□□□□ -0.37
APH1B-208ENST00000560353 TRPC6Q9Y210 931 aa12.76□□□□□ -0.37
APH1B-208ENST00000560353 TRANK1O15050 2925 aa12.76□□□□□ -0.37
APH1B-208ENST00000560353 RIOK3O14730 519 aaKnown RBP12.75□□□□□ -0.37
APH1B-208ENST00000560353 TIMP1P01033 207 aa12.75□□□□□ -0.37
APH1B-208ENST00000560353 TFF2Q03403 129 aa12.75□□□□□ -0.37
APH1B-208ENST00000560353 FAAP100Q0VG06 881 aa12.75□□□□□ -0.37
APH1B-208ENST00000560353 PPIGQ13427 754 aaKnown RBP eCLIP12.75□□□□□ -0.37
APH1B-208ENST00000560353 RASIP1Q5U651 963 aa12.75□□□□□ -0.37
APH1B-208ENST00000560353 CCDC102BQ68D86 513 aa12.75□□□□□ -0.37
APH1B-208ENST00000560353 MFSD5Q6N075 450 aa12.75□□□□□ -0.37
APH1B-208ENST00000560353 LBX2Q6XYB7 198 aa12.75□□□□□ -0.37
APH1B-208ENST00000560353 ERICH6Q7L0X2 663 aa12.75□□□□□ -0.37
APH1B-208ENST00000560353 ANKRD33Q7Z3H0 272 aa12.75□□□□□ -0.37
APH1B-208ENST00000560353 RNF180Q86T96 592 aa12.75□□□□□ -0.37
APH1B-208ENST00000560353 FOXP4Q8IVH2 680 aaPredicted RBP12.75□□□□□ -0.37
APH1B-208ENST00000560353 HERVK_113Q902F9 699 aa12.75□□□□□ -0.37
APH1B-208ENST00000560353 SLC28A3Q9HAS3 691 aa12.75□□□□□ -0.37
APH1B-208ENST00000560353 SLC5A4Q9NY91 659 aa12.75□□□□□ -0.37
APH1B-208ENST00000560353 ERC2O15083 957 aa12.74□□□□□ -0.37
APH1B-208ENST00000560353 CIAO1O76071 339 aa12.74□□□□□ -0.37
APH1B-208ENST00000560353 ADORA2AP29274 412 aa12.74□□□□□ -0.37
APH1B-208ENST00000560353 RFX5P48382 616 aaPredicted RBP12.74□□□□□ -0.37
APH1B-208ENST00000560353 KCNQ1P51787 676 aa12.74□□□□□ -0.37
APH1B-208ENST00000560353 RASGRF1Q13972 1273 aa12.74□□□□□ -0.37
APH1B-208ENST00000560353 FAM47AQ5JRC9 791 aa12.74□□□□□ -0.37
APH1B-208ENST00000560353 TMEM240Q5SV17 173 aa12.74□□□□□ -0.37
APH1B-208ENST00000560353 CATSPERGQ6ZRH7 1159 aa12.74□□□□□ -0.37
APH1B-208ENST00000560353 C16orf59Q7L2K0 433 aa12.74□□□□□ -0.37
APH1B-208ENST00000560353 TEX11Q8IYF3 940 aa12.74□□□□□ -0.37
APH1B-208ENST00000560353 C12orf42Q96LP6 360 aa12.74□□□□□ -0.37
APH1B-208ENST00000560353 TRIM34Q9BYJ4 488 aa12.74□□□□□ -0.37
APH1B-208ENST00000560353 XPNPEP3Q9NQH7 507 aa12.74□□□□□ -0.37
APH1B-208ENST00000560353 BTBD7Q9P203 1132 aa12.74□□□□□ -0.37
APH1B-208ENST00000560353 ZBTB21Q9ULJ3 1066 aa12.74□□□□□ -0.37
APH1B-208ENST00000560353 ATAD5Q96QE3 1844 aa12.74□□□□□ -0.37
APH1B-208ENST00000560353 A0A1W2PQ45 241 aaPredicted RBP12.73□□□□□ -0.37
APH1B-208ENST00000560353 A0A1W2PQY0 241 aa12.73□□□□□ -0.37
APH1B-208ENST00000560353 RARBP10826 455 aa12.73□□□□□ -0.37
APH1B-208ENST00000560353 MRE11P49959 708 aa12.73□□□□□ -0.37
APH1B-208ENST00000560353 PRAMEF19Q5SWL8 479 aa12.73□□□□□ -0.37
APH1B-208ENST00000560353 METTL16Q86W50 562 aaKnown RBP12.73□□□□□ -0.37
APH1B-208ENST00000560353 CRACR2BQ8N4Y2 399 aaPredicted RBP12.73□□□□□ -0.37
APH1B-208ENST00000560353 ZNF384Q8TF68 577 aa12.73□□□□□ -0.37
APH1B-208ENST00000560353 FEZ1Q99689 392 aa12.73□□□□□ -0.37
APH1B-208ENST00000560353 GDF11O95390 407 aa12.72□□□□□ -0.37
APH1B-208ENST00000560353 SKIV2LQ15477 1246 aaKnown RBP12.72□□□□□ -0.37
APH1B-208ENST00000560353 PSRC1Q6PGN9 363 aaPredicted RBP12.72□□□□□ -0.37
APH1B-208ENST00000560353 C11orf16Q9NQ32 467 aa12.72□□□□□ -0.37
APH1B-208ENST00000560353 NRBP1Q9UHY1 535 aa12.72□□□□□ -0.37
APH1B-208ENST00000560353 TBX21Q9UL17 535 aa12.72□□□□□ -0.37
APH1B-208ENST00000560353 TCF20Q9UGU0 1960 aaKnown RBP12.71□□□□□ -0.37
APH1B-208ENST00000560353 SMIM22K7EJ46 135 aa12.71□□□□□ -0.37
APH1B-208ENST00000560353 ADORA1P30542 326 aa12.71□□□□□ -0.37
APH1B-208ENST00000560353 IL15P40933 162 aaPredicted RBP12.71□□□□□ -0.37
APH1B-208ENST00000560353 USP14P54578 494 aa12.71□□□□□ -0.37
APH1B-208ENST00000560353 SHROOM1Q2M3G4 852 aaPredicted RBP12.71□□□□□ -0.37
APH1B-208ENST00000560353 MICALL1Q8N3F8 863 aa12.71□□□□□ -0.37
APH1B-208ENST00000560353 TMEM199Q8N511 208 aa12.71□□□□□ -0.37
APH1B-208ENST00000560353 NUP133Q8WUM0 1156 aa12.71□□□□□ -0.37
APH1B-208ENST00000560353 NSUN4Q96CB9 384 aaKnown RBP12.71□□□□□ -0.37
APH1B-208ENST00000560353 NOL10Q9BSC4 688 aaKnown RBP12.71□□□□□ -0.37
APH1B-208ENST00000560353 TSEN34Q9BSV6 310 aaKnown RBP12.71□□□□□ -0.37
APH1B-208ENST00000560353 USP44Q9H0E7 712 aa12.71□□□□□ -0.37
APH1B-208ENST00000560353 SIL1Q9H173 461 aa12.71□□□□□ -0.37
APH1B-208ENST00000560353 MTIF3Q9H2K0 278 aaKnown RBP12.71□□□□□ -0.37
APH1B-208ENST00000560353 NKX2-4Q9H2Z4 354 aa12.71□□□□□ -0.37
APH1B-208ENST00000560353 COG5Q9UP83 839 aa12.71□□□□□ -0.37
APH1B-208ENST00000560353 MYO9BQ13459 2157 aa12.7□□□□□ -0.38
APH1B-208ENST00000560353 FAM86C2PA6NEL3 165 aa12.7□□□□□ -0.38
APH1B-208ENST00000560353 TLL1O43897 1013 aa12.7□□□□□ -0.38
APH1B-208ENST00000560353 COBLO75128 1261 aa12.7□□□□□ -0.38
APH1B-208ENST00000560353 PGK1P00558 417 aa12.7□□□□□ -0.38
APH1B-208ENST00000560353 CSF2RAP15509 400 aa12.7□□□□□ -0.38
APH1B-208ENST00000560353 ZYXQ15942 572 aaKnown RBP12.7□□□□□ -0.38
APH1B-208ENST00000560353 ATF7IPQ6VMQ6 1270 aa12.7□□□□□ -0.38
APH1B-208ENST00000560353 ZNF365Q70YC5 407 aa12.7□□□□□ -0.38
APH1B-208ENST00000560353 WDR63Q8IWG1 891 aa12.7□□□□□ -0.38
APH1B-208ENST00000560353 ABRAQ8N0Z2 381 aa12.7□□□□□ -0.38
APH1B-208ENST00000560353 SHCBP1Q8NEM2 672 aa12.7□□□□□ -0.38
APH1B-208ENST00000560353 SH3RF3Q8TEJ3 882 aaPredicted RBP12.7□□□□□ -0.38
APH1B-208ENST00000560353 MOV10L1Q9BXT6 1211 aaKnown RBP12.7□□□□□ -0.38
APH1B-208ENST00000560353 KIAA1683Q9H0B3 1180 aa12.7□□□□□ -0.38
APH1B-208ENST00000560353 DNAJC18Q9H819 358 aa12.7□□□□□ -0.38
APH1B-208ENST00000560353 MROH7Q68CQ1 1323 aa12.69□□□□□ -0.38
APH1B-208ENST00000560353 ZNF521Q96K83 1311 aa12.69□□□□□ -0.38
APH1B-208ENST00000560353 SPDYE16A6NNV3 312 aaPredicted RBP12.69□□□□□ -0.38
APH1B-208ENST00000560353 PI4K2BG5E9Z4 385 aa12.69□□□□□ -0.38
APH1B-208ENST00000560353 BAG3O95817 575 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms