RNA–Protein interactions for RNA: ENST00000559742.5

PDE8A-211, Transcript of phosphodiesterase 8A, humanhuman

TSL 1 (best)

Gene PDE8A, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-211ENST00000559742 HSP90AA4PQ58FG1 418 aa21.38■■□□□ 1.01
PDE8A-211ENST00000559742 GEMIN8Q9NWZ8 242 aaKnown RBP21.38■■□□□ 1.01
PDE8A-211ENST00000559742 IFNKQ9P0W0 207 aa21.38■■□□□ 1.01
PDE8A-211ENST00000559742 RC3H1Q5TC82 1133 aaKnown RBP21.38■■□□□ 1.01
PDE8A-211ENST00000559742 FAM196AQ6ZSG2 479 aa21.38■■□□□ 1.01
PDE8A-211ENST00000559742 TMC6Q7Z403 805 aa21.38■■□□□ 1.01
PDE8A-211ENST00000559742 DZIP1Q86YF9 867 aaKnown RBP21.38■■□□□ 1.01
PDE8A-211ENST00000559742 CCDC34Q96HJ3 373 aa21.38■■□□□ 1.01
PDE8A-211ENST00000559742 CARD6Q9BX69 1037 aa21.38■■□□□ 1.01
PDE8A-211ENST00000559742 XPO4Q9C0E2 1151 aaKnown RBP21.38■■□□□ 1.01
PDE8A-211ENST00000559742 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.38■■□□□ 1.01
PDE8A-211ENST00000559742 RRP15Q9Y3B9 282 aaKnown RBP21.38■■□□□ 1.01
PDE8A-211ENST00000559742 CUTAO60888 179 aa21.37■■□□□ 1.01
PDE8A-211ENST00000559742 ATP1A3P13637 1013 aa21.37■■□□□ 1.01
PDE8A-211ENST00000559742 NOM1Q5C9Z4 860 aaKnown RBP21.37■■□□□ 1.01
PDE8A-211ENST00000559742 USP49Q70CQ1 688 aa21.37■■□□□ 1.01
PDE8A-211ENST00000559742 FOXP4Q8IVH2 680 aaPredicted RBP21.37■■□□□ 1.01
PDE8A-211ENST00000559742 GRAMD1CQ8IYS0 662 aa21.37■■□□□ 1.01
PDE8A-211ENST00000559742 CERKQ8TCT0 537 aa21.37■■□□□ 1.01
PDE8A-211ENST00000559742 ANKRD2Q9GZV1 360 aa21.37■■□□□ 1.01
PDE8A-211ENST00000559742 MCM9Q9NXL9 1143 aa21.37■■□□□ 1.01
PDE8A-211ENST00000559742 PSD3Q9NYI0 1048 aa21.37■■□□□ 1.01
PDE8A-211ENST00000559742 MTMR7Q9Y216 660 aa21.37■■□□□ 1.01
PDE8A-211ENST00000559742 USP17L8P0C7I0 530 aa21.37■■□□□ 1.01
PDE8A-211ENST00000559742 PKN1Q16512 942 aa21.37■■□□□ 1.01
PDE8A-211ENST00000559742 EXOC4Q96A65 974 aa21.37■■□□□ 1.01
PDE8A-211ENST00000559742 CRNKL1Q9BZJ0 848 aaKnown RBP21.37■■□□□ 1.01
PDE8A-211ENST00000559742 FOXP1Q9H334 677 aaPredicted RBP21.37■■□□□ 1.01
PDE8A-211ENST00000559742 NID2Q14112 1375 aa21.36■■□□□ 1.01
PDE8A-211ENST00000559742 POLR2DO15514 142 aaKnown RBP21.36■■□□□ 1.01
PDE8A-211ENST00000559742 GTF2A1P52655 376 aaPredicted RBP21.36■■□□□ 1.01
PDE8A-211ENST00000559742 TROAPQ12815 778 aa21.36■■□□□ 1.01
PDE8A-211ENST00000559742 DIXDC1Q155Q3 683 aa21.36■■□□□ 1.01
PDE8A-211ENST00000559742 ICE2Q659A1 982 aa21.36■■□□□ 1.01
PDE8A-211ENST00000559742 FANCGO15287 622 aa21.36■■□□□ 1.01
PDE8A-211ENST00000559742 GRIK5Q16478 980 aa21.36■■□□□ 1.01
PDE8A-211ENST00000559742 RILPL1Q5EBL4 403 aa21.36■■□□□ 1.01
PDE8A-211ENST00000559742 TRAPPC3LQ5T215 181 aa21.36■■□□□ 1.01
PDE8A-211ENST00000559742 TRIM65Q6PJ69 517 aa21.36■■□□□ 1.01
PDE8A-211ENST00000559742 FNBP4Q8N3X1 1017 aaPredicted RBP21.36■■□□□ 1.01
PDE8A-211ENST00000559742 EPC1Q9H2F5 836 aa21.36■■□□□ 1.01
PDE8A-211ENST00000559742 PCDHA5Q9Y5H7 936 aa21.36■■□□□ 1.01
PDE8A-211ENST00000559742 TNRC6CQ9HCJ0 1690 aaKnown RBP21.35■■□□□ 1.01
PDE8A-211ENST00000559742 URI1O94763 535 aaPredicted RBP21.35■■□□□ 1.01
PDE8A-211ENST00000559742 CHRM1P11229 460 aaPredicted RBP21.35■■□□□ 1.01
PDE8A-211ENST00000559742 NCAPHQ15003 741 aa21.35■■□□□ 1.01
PDE8A-211ENST00000559742 IQUBQ8NA54 791 aa21.35■■□□□ 1.01
PDE8A-211ENST00000559742 RNF26Q9BY78 433 aaPredicted RBP21.35■■□□□ 1.01
PDE8A-211ENST00000559742 TSPY2A6NKD2 308 aa21.35■■□□□ 1.01
PDE8A-211ENST00000559742 WNT7AO00755 349 aa21.35■■□□□ 1.01
PDE8A-211ENST00000559742 NRDCO43847 1150 aa21.35■■□□□ 1.01
PDE8A-211ENST00000559742 FBXO2Q9UK22 296 aaPredicted RBP21.35■■□□□ 1.01
PDE8A-211ENST00000559742 ADAM21Q9UKJ8 722 aa21.35■■□□□ 1.01
PDE8A-211ENST00000559742 VEGFAP15692 232 aaPredicted RBP21.34■■□□□ 1.01
PDE8A-211ENST00000559742 HSPA1LP34931 641 aa21.34■■□□□ 1.01
PDE8A-211ENST00000559742 PARP3Q9Y6F1 533 aa21.34■■□□□ 1.01
PDE8A-211ENST00000559742 SEMA3EO15041 775 aa21.34■■□□□ 1.01
PDE8A-211ENST00000559742 CCP110O43303 1012 aa21.34■■□□□ 1.01
PDE8A-211ENST00000559742 LMAN1P49257 510 aa21.34■■□□□ 1.01
PDE8A-211ENST00000559742 ZNF827Q17R98 1081 aa21.34■■□□□ 1.01
PDE8A-211ENST00000559742 DYNLL2Q96FJ2 89 aa21.34■■□□□ 1.01
PDE8A-211ENST00000559742 FUT2Q10981 343 aa21.33■■□□□ 1.01
PDE8A-211ENST00000559742 CNBD1Q8NA66 436 aa21.33■■□□□ 1.01
PDE8A-211ENST00000559742 MTA3Q9BTC8 594 aa21.33■■□□□ 1.01
PDE8A-211ENST00000559742 LRRC4BQ9NT99 713 aa21.33■■□□□ 1.01
PDE8A-211ENST00000559742 SERTAD1Q9UHV2 236 aa21.33■■□□□ 1.01
PDE8A-211ENST00000559742 TUBE1Q9UJT0 475 aa21.33■■□□□ 1.01
PDE8A-211ENST00000559742 ZNF831Q5JPB2 1677 aa21.33■■□□□ 1
PDE8A-211ENST00000559742 PRR29P0C7W0 189 aa21.33■■□□□ 1
PDE8A-211ENST00000559742 ACTN2P35609 894 aa21.33■■□□□ 1
PDE8A-211ENST00000559742 DHX8Q14562 1220 aaKnown RBP21.33■■□□□ 1
PDE8A-211ENST00000559742 CSRNP2Q9H175 543 aa21.33■■□□□ 1
PDE8A-211ENST00000559742 SRBD1Q8N5C6 995 aaKnown RBP21.32■■□□□ 1
PDE8A-211ENST00000559742 GPR161Q8N6U8 529 aaKnown RBP21.32■■□□□ 1
PDE8A-211ENST00000559742 FUT8Q9BYC5 575 aa21.32■■□□□ 1
PDE8A-211ENST00000559742 CCDC88AQ3V6T2 1871 aa21.32■■□□□ 1
PDE8A-211ENST00000559742 BMP6P22004 513 aa21.32■■□□□ 1
PDE8A-211ENST00000559742 PTPREP23469 700 aa21.32■■□□□ 1
PDE8A-211ENST00000559742 MEX3CQ5U5Q3 659 aaKnown RBP21.32■■□□□ 1
PDE8A-211ENST00000559742 BPIFA3Q9BQP9 254 aa21.32■■□□□ 1
PDE8A-211ENST00000559742 ARFGAP3Q9NP61 516 aa21.32■■□□□ 1
PDE8A-211ENST00000559742 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.32■■□□□ 1
PDE8A-211ENST00000559742 XBP1P17861 261 aa21.31■■□□□ 1
PDE8A-211ENST00000559742 KRT2P35908 639 aa21.31■■□□□ 1
PDE8A-211ENST00000559742 USP5P45974 858 aa21.31■■□□□ 1
PDE8A-211ENST00000559742 GOLGA6L1Q8N7Z2 621 aa21.31■■□□□ 1
PDE8A-211ENST00000559742 CTCFLQ8NI51 663 aaPredicted RBP21.31■■□□□ 1
PDE8A-211ENST00000559742 SH3RF3Q8TEJ3 882 aaPredicted RBP21.31■■□□□ 1
PDE8A-211ENST00000559742 HSD3B7Q9H2F3 369 aa21.31■■□□□ 1
PDE8A-211ENST00000559742 COL24A1Q17RW2 1714 aa21.31■■□□□ 1
PDE8A-211ENST00000559742 ADAMTS3O15072 1205 aa21.31■■□□□ 1
PDE8A-211ENST00000559742 PDE4BQ07343 736 aa21.31■■□□□ 1
PDE8A-211ENST00000559742 EPSTI1Q96J88 318 aa21.31■■□□□ 1
PDE8A-211ENST00000559742 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.3■■□□□ 1
PDE8A-211ENST00000559742 LDHBP07195 334 aaKnown RBP21.3■■□□□ 1
PDE8A-211ENST00000559742 RCAN1P53805 252 aa21.3■■□□□ 1
PDE8A-211ENST00000559742 ZNF174Q15697 407 aa21.3■■□□□ 1
PDE8A-211ENST00000559742 PHF20Q9BVI0 1012 aa21.3■■□□□ 1
PDE8A-211ENST00000559742 ATP8A2Q9NTI2 1148 aa21.3■■□□□ 1
PDE8A-211ENST00000559742 PRPF3O43395 683 aaKnown RBP21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 180.5 ms