RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 GRK4P32298 578 aa13.08□□□□□ -0.32
SPG11-216ENST00000559347 FLT3LGP49771 235 aa13.08□□□□□ -0.32
SPG11-216ENST00000559347 LBX2Q6XYB7 198 aa13.08□□□□□ -0.32
SPG11-216ENST00000559347 CATSPERGQ6ZRH7 1159 aa13.08□□□□□ -0.32
SPG11-216ENST00000559347 TICAM2Q86XR7 235 aa13.08□□□□□ -0.32
SPG11-216ENST00000559347 SIAH1Q8IUQ4 282 aa13.08□□□□□ -0.32
SPG11-216ENST00000559347 NAPBQ9H115 298 aa13.08□□□□□ -0.32
SPG11-216ENST00000559347 SH2D4AQ9H788 454 aa13.08□□□□□ -0.32
SPG11-216ENST00000559347 TMX2Q9Y320 296 aa13.08□□□□□ -0.32
SPG11-216ENST00000559347 PDE4DIPQ5VU43 2346 aa13.07□□□□□ -0.32
SPG11-216ENST00000559347 SPDYE16A6NNV3 312 aaPredicted RBP13.07□□□□□ -0.32
SPG11-216ENST00000559347 TRIM6-TRIM34B2RNG4 842 aa13.07□□□□□ -0.32
SPG11-216ENST00000559347 CNMDO75829 334 aa13.07□□□□□ -0.32
SPG11-216ENST00000559347 ERVK-9P63128 1117 aa13.07□□□□□ -0.32
SPG11-216ENST00000559347 ERVK-24P63145 666 aa13.07□□□□□ -0.32
SPG11-216ENST00000559347 IRF5Q13568 498 aa13.07□□□□□ -0.32
SPG11-216ENST00000559347 KIAA1755Q5JYT7 1200 aa13.07□□□□□ -0.32
SPG11-216ENST00000559347 STK11IPQ8N1F8 1099 aa13.07□□□□□ -0.32
SPG11-216ENST00000559347 SLAIN1Q8ND83 568 aa13.07□□□□□ -0.32
SPG11-216ENST00000559347 LPAR1Q92633 364 aa13.07□□□□□ -0.32
SPG11-216ENST00000559347 COA7Q96BR5 231 aa13.07□□□□□ -0.32
SPG11-216ENST00000559347 FAM227BQ96M60 508 aa13.07□□□□□ -0.32
SPG11-216ENST00000559347 PAGR1Q9BTK6 254 aa13.07□□□□□ -0.32
SPG11-216ENST00000559347 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.07□□□□□ -0.32
SPG11-216ENST00000559347 NACAP1Q9BZK3 213 aa13.07□□□□□ -0.32
SPG11-216ENST00000559347 VCPKMTQ9H867 229 aa13.07□□□□□ -0.32
SPG11-216ENST00000559347 HELLSQ9NRZ9 838 aa13.07□□□□□ -0.32
SPG11-216ENST00000559347 RBPJLQ9UBG7 517 aa13.07□□□□□ -0.32
SPG11-216ENST00000559347 PLXNA1Q9UIW2 1896 aa13.06□□□□□ -0.32
SPG11-216ENST00000559347 EEF2P13639 858 aaKnown RBP13.06□□□□□ -0.32
SPG11-216ENST00000559347 VPS53Q5VIR6 699 aa13.06□□□□□ -0.32
SPG11-216ENST00000559347 GPRC5AQ8NFJ5 357 aa13.06□□□□□ -0.32
SPG11-216ENST00000559347 TANGO6Q9C0B7 1094 aa13.06□□□□□ -0.32
SPG11-216ENST00000559347 KANSL2Q9H9L4 492 aa13.06□□□□□ -0.32
SPG11-216ENST00000559347 RABGAP1Q9Y3P9 1069 aa13.06□□□□□ -0.32
SPG11-216ENST00000559347 ZMYM6O95789 1325 aa13.06□□□□□ -0.32
SPG11-216ENST00000559347 IGKV6D-41A0A0C4DH26 115 aa13.05□□□□□ -0.32
SPG11-216ENST00000559347 WDR46O15213 610 aaKnown RBP13.05□□□□□ -0.32
SPG11-216ENST00000559347 ADCY3O60266 1144 aa13.05□□□□□ -0.32
SPG11-216ENST00000559347 PRDM1O75626 825 aa13.05□□□□□ -0.32
SPG11-216ENST00000559347 MYCP01106 439 aaPredicted RBP13.05□□□□□ -0.32
SPG11-216ENST00000559347 ELNP15502 786 aa13.05□□□□□ -0.32
SPG11-216ENST00000559347 PPARAQ07869 468 aa13.05□□□□□ -0.32
SPG11-216ENST00000559347 NMIQ13287 307 aaPredicted RBP13.05□□□□□ -0.32
SPG11-216ENST00000559347 MTFR1Q15390 333 aa13.05□□□□□ -0.32
SPG11-216ENST00000559347 ZNF589Q86UQ0 364 aaPredicted RBP13.05□□□□□ -0.32
SPG11-216ENST00000559347 SPICE1Q8N0Z3 855 aa13.05□□□□□ -0.32
SPG11-216ENST00000559347 PXYLP1Q8TE99 480 aa13.05□□□□□ -0.32
SPG11-216ENST00000559347 RILPL2Q969X0 211 aa13.05□□□□□ -0.32
SPG11-216ENST00000559347 PORCNQ9H237 461 aa13.05□□□□□ -0.32
SPG11-216ENST00000559347 MKNK2Q9HBH9 465 aa13.05□□□□□ -0.32
SPG11-216ENST00000559347 ZNF287Q9HBT7 754 aa13.05□□□□□ -0.32
SPG11-216ENST00000559347 ZNFX1Q9P2E3 1918 aaKnown RBP13.04□□□□□ -0.32
SPG11-216ENST00000559347 ABCB7O75027 752 aa13.04□□□□□ -0.32
SPG11-216ENST00000559347 PDE4AP27815 886 aa13.04□□□□□ -0.32
SPG11-216ENST00000559347 MAPK4P31152 587 aa13.04□□□□□ -0.32
SPG11-216ENST00000559347 ATP2B2Q01814 1243 aa13.04□□□□□ -0.32
SPG11-216ENST00000559347 PDE4BQ07343 736 aa13.04□□□□□ -0.32
SPG11-216ENST00000559347 Q3C1V9 767 aa13.04□□□□□ -0.32
SPG11-216ENST00000559347 MCMDC2Q4G0Z9 681 aa13.04□□□□□ -0.32
SPG11-216ENST00000559347 SOCS4Q8WXH5 440 aa13.04□□□□□ -0.32
SPG11-216ENST00000559347 TMEM106CQ9BVX2 250 aa13.04□□□□□ -0.32
SPG11-216ENST00000559347 GOPCQ9HD26 462 aa13.04□□□□□ -0.32
SPG11-216ENST00000559347 BTBD7Q9P203 1132 aa13.04□□□□□ -0.32
SPG11-216ENST00000559347 GJD2Q9UKL4 321 aa13.04□□□□□ -0.32
SPG11-216ENST00000559347 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.04□□□□□ -0.32
SPG11-216ENST00000559347 CCDC171Q6TFL3 1326 aa13.04□□□□□ -0.32
SPG11-216ENST00000559347 INHAP05111 366 aa13.03□□□□□ -0.32
SPG11-216ENST00000559347 EN2P19622 333 aaPredicted RBP13.03□□□□□ -0.32
SPG11-216ENST00000559347 UBXN2AP68543 259 aa13.03□□□□□ -0.32
SPG11-216ENST00000559347 COG2Q14746 738 aa13.03□□□□□ -0.32
SPG11-216ENST00000559347 GPR142Q7Z601 462 aa13.03□□□□□ -0.32
SPG11-216ENST00000559347 SHISA4Q96DD7 197 aa13.03□□□□□ -0.32
SPG11-216ENST00000559347 NYAP2Q9P242 653 aa13.03□□□□□ -0.32
SPG11-216ENST00000559347 FLOT1O75955 427 aa13.02□□□□□ -0.33
SPG11-216ENST00000559347 HMGCRP04035 888 aa13.02□□□□□ -0.33
SPG11-216ENST00000559347 SLC3A2P08195 630 aaKnown RBP13.02□□□□□ -0.33
SPG11-216ENST00000559347 CCL5P13501 91 aa13.02□□□□□ -0.33
SPG11-216ENST00000559347 GSPT1P15170 499 aaKnown RBP13.02□□□□□ -0.33
SPG11-216ENST00000559347 SDSP20132 328 aa13.02□□□□□ -0.33
SPG11-216ENST00000559347 CCNA1P78396 465 aa13.02□□□□□ -0.33
SPG11-216ENST00000559347 CTDSPL2Q05D32 466 aa13.02□□□□□ -0.33
SPG11-216ENST00000559347 ALX1Q15699 326 aa13.02□□□□□ -0.33
SPG11-216ENST00000559347 ZNF444Q8N0Y2 327 aaPredicted RBP13.02□□□□□ -0.33
SPG11-216ENST00000559347 CEP95Q96GE4 821 aa13.02□□□□□ -0.33
SPG11-216ENST00000559347 BIN2Q9UBW5 565 aaPredicted RBP13.02□□□□□ -0.33
SPG11-216ENST00000559347 ANAPC4Q9UJX5 808 aa13.02□□□□□ -0.33
SPG11-216ENST00000559347 ALPK3Q96L96 1907 aa13.01□□□□□ -0.33
SPG11-216ENST00000559347 TSPY3P0CV98 308 aa13.01□□□□□ -0.33
SPG11-216ENST00000559347 TSPY8P0CW00 308 aa13.01□□□□□ -0.33
SPG11-216ENST00000559347 HSPD1P10809 573 aaKnown RBP13.01□□□□□ -0.33
SPG11-216ENST00000559347 MORN1Q5T089 497 aa13.01□□□□□ -0.33
SPG11-216ENST00000559347 FAM83BQ5T0W9 1011 aa13.01□□□□□ -0.33
SPG11-216ENST00000559347 PLEKHH3Q7Z736 793 aa13.01□□□□□ -0.33
SPG11-216ENST00000559347 CCAR1Q8IX12 1150 aaKnown RBP13.01□□□□□ -0.33
SPG11-216ENST00000559347 MB21D1Q8N884 522 aa13.01□□□□□ -0.33
SPG11-216ENST00000559347 NEDD1Q8NHV4 660 aa13.01□□□□□ -0.33
SPG11-216ENST00000559347 TRIB2Q92519 343 aa13.01□□□□□ -0.33
SPG11-216ENST00000559347 USP6NLQ92738 828 aa13.01□□□□□ -0.33
SPG11-216ENST00000559347 ATG4CQ96DT6 458 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms