RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 IL1RAPL2Q9NP60 686 aa7.05□□□□□ -1.28
USP3-212ENST00000559276 LTBP2Q14767 1821 aa7.05□□□□□ -1.28
USP3-212ENST00000559276 BAZ2AQ9UIF9 1905 aaKnown RBP7.05□□□□□ -1.28
USP3-212ENST00000559276 COL11A1P12107 1806 aaPredicted RBP7.04□□□□□ -1.28
USP3-212ENST00000559276 MYH8P13535 1937 aa7.04□□□□□ -1.28
USP3-212ENST00000559276 FSD2A1L4K1 749 aa7.04□□□□□ -1.28
USP3-212ENST00000559276 USP17L15C9J2P7 530 aa7.04□□□□□ -1.28
USP3-212ENST00000559276 USP17L13C9JLJ4 530 aa7.04□□□□□ -1.28
USP3-212ENST00000559276 USP17L11C9JVI0 530 aa7.04□□□□□ -1.28
USP3-212ENST00000559276 USP17L18D6R9N7 530 aa7.04□□□□□ -1.28
USP3-212ENST00000559276 USP17L22D6RA61 530 aa7.04□□□□□ -1.28
USP3-212ENST00000559276 USP17L17D6RBQ6 530 aa7.04□□□□□ -1.28
USP3-212ENST00000559276 USP17L19D6RCP7 530 aa7.04□□□□□ -1.28
USP3-212ENST00000559276 USP17L20D6RJB6 530 aa7.04□□□□□ -1.28
USP3-212ENST00000559276 HOXC6P09630 235 aa7.04□□□□□ -1.28
USP3-212ENST00000559276 ZKSCAN1P17029 563 aaPredicted RBP7.04□□□□□ -1.28
USP3-212ENST00000559276 PTPREP23469 700 aa7.04□□□□□ -1.28
USP3-212ENST00000559276 RGS2P41220 211 aa7.04□□□□□ -1.28
USP3-212ENST00000559276 MAGEA10P43363 369 aaPredicted RBP7.04□□□□□ -1.28
USP3-212ENST00000559276 USP17L24Q0WX57 530 aa7.04□□□□□ -1.28
USP3-212ENST00000559276 MAP2K5Q13163 448 aa7.04□□□□□ -1.28
USP3-212ENST00000559276 GRB14Q14449 540 aa7.04□□□□□ -1.28
USP3-212ENST00000559276 RAB3GAP1Q15042 981 aa7.04□□□□□ -1.28
USP3-212ENST00000559276 CERKLQ49MI3 558 aaPredicted RBP7.04□□□□□ -1.28
USP3-212ENST00000559276 GLIPR1L2Q4G1C9 344 aa7.04□□□□□ -1.28
USP3-212ENST00000559276 TMED8Q6PL24 325 aaPredicted RBP7.04□□□□□ -1.28
USP3-212ENST00000559276 CLEC10AQ8IUN9 316 aa7.04□□□□□ -1.28
USP3-212ENST00000559276 FTSJ3Q8IY81 847 aaKnown RBP7.04□□□□□ -1.28
USP3-212ENST00000559276 LCORLQ8N3X6 602 aa7.04□□□□□ -1.28
USP3-212ENST00000559276 SLC44A5Q8NCS7 719 aa7.04□□□□□ -1.28
USP3-212ENST00000559276 GTF3C2Q8WUA4 911 aaPredicted RBP7.04□□□□□ -1.28
USP3-212ENST00000559276 SDR42E1Q8WUS8 393 aa7.04□□□□□ -1.28
USP3-212ENST00000559276 TRIM34Q9BYJ4 488 aa7.04□□□□□ -1.28
USP3-212ENST00000559276 RPAP3Q9H6T3 665 aaPredicted RBP7.04□□□□□ -1.28
USP3-212ENST00000559276 DCP1AQ9NPI6 582 aaPredicted RBP7.04□□□□□ -1.28
USP3-212ENST00000559276 CHMP5Q9NZZ3 219 aa7.04□□□□□ -1.28
USP3-212ENST00000559276 CIZ1Q9ULV3 898 aaPredicted RBP7.04□□□□□ -1.28
USP3-212ENST00000559276 EYSQ5T1H1 3165 aa7.04□□□□□ -1.28
USP3-212ENST00000559276 UNC80Q8N2C7 3258 aa7.04□□□□□ -1.28
USP3-212ENST00000559276 A0A0C4DFX4 3053 aa7.04□□□□□ -1.28
USP3-212ENST00000559276 ZNF532Q9HCE3 1301 aa7.03□□□□□ -1.28
USP3-212ENST00000559276 MYH7P12883 1935 aa7.03□□□□□ -1.28
USP3-212ENST00000559276 GREB1LQ9C091 1923 aaPredicted RBP7.03□□□□□ -1.28
USP3-212ENST00000559276 MAGEB6P1A0A0J9YX57 407 aa7.03□□□□□ -1.28
USP3-212ENST00000559276 SLC15A5A6NIM6 579 aa7.03□□□□□ -1.28
USP3-212ENST00000559276 PRKAB2O43741 272 aa7.03□□□□□ -1.28
USP3-212ENST00000559276 MRE11P49959 708 aa7.03□□□□□ -1.28
USP3-212ENST00000559276 USP14P54578 494 aa7.03□□□□□ -1.28
USP3-212ENST00000559276 MAP3K12Q12852 859 aa7.03□□□□□ -1.28
USP3-212ENST00000559276 HDAC1Q13547 482 aaPredicted RBP7.03□□□□□ -1.28
USP3-212ENST00000559276 LRIT3Q3SXY7 679 aa7.03□□□□□ -1.28
USP3-212ENST00000559276 SLC9C2Q5TAH2 1124 aa7.03□□□□□ -1.28
USP3-212ENST00000559276 Q7L0L9 218 aa7.03□□□□□ -1.28
USP3-212ENST00000559276 TTC6Q86TZ1 520 aa7.03□□□□□ -1.28
USP3-212ENST00000559276 CERS3Q8IU89 383 aa7.03□□□□□ -1.28
USP3-212ENST00000559276 TRMT44Q8IYL2 757 aaKnown RBP7.03□□□□□ -1.28
USP3-212ENST00000559276 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.03□□□□□ -1.28
USP3-212ENST00000559276 DYNLL2Q96FJ2 89 aa7.03□□□□□ -1.28
USP3-212ENST00000559276 CHMP4BQ9H444 224 aaKnown RBP7.03□□□□□ -1.28
USP3-212ENST00000559276 ZBTB40Q9NUA8 1239 aa7.03□□□□□ -1.28
USP3-212ENST00000559276 ZNFX1Q9P2E3 1918 aaKnown RBP7.03□□□□□ -1.28
USP3-212ENST00000559276 CYP2D7A0A087X1C5 515 aa7.02□□□□□ -1.29
USP3-212ENST00000559276 GOLGA6L3A6NEY3 463 aa7.02□□□□□ -1.29
USP3-212ENST00000559276 GOLIM4O00461 696 aa7.02□□□□□ -1.29
USP3-212ENST00000559276 COBLO75128 1261 aa7.02□□□□□ -1.29
USP3-212ENST00000559276 IGHDP01880 384 aa7.02□□□□□ -1.29
USP3-212ENST00000559276 CYBAP13498 195 aa7.02□□□□□ -1.29
USP3-212ENST00000559276 AKR1B1P15121 316 aa7.02□□□□□ -1.29
USP3-212ENST00000559276 CYP2C19P33261 490 aa7.02□□□□□ -1.29
USP3-212ENST00000559276 SLC4A3P48751 1232 aa7.02□□□□□ -1.29
USP3-212ENST00000559276 GPR153Q6NV75 609 aa7.02□□□□□ -1.29
USP3-212ENST00000559276 ERC1Q8IUD2 1116 aa7.02□□□□□ -1.29
USP3-212ENST00000559276 TDHQ8IZJ6 230 aa7.02□□□□□ -1.29
USP3-212ENST00000559276 FEZ1Q99689 392 aa7.02□□□□□ -1.29
USP3-212ENST00000559276 MOV10L1Q9BXT6 1211 aaKnown RBP7.02□□□□□ -1.29
USP3-212ENST00000559276 ARMT1Q9H993 441 aa7.02□□□□□ -1.29
USP3-212ENST00000559276 MCM9Q9NXL9 1143 aa7.02□□□□□ -1.29
USP3-212ENST00000559276 DDX20Q9UHI6 824 aaKnown RBP7.02□□□□□ -1.29
USP3-212ENST00000559276 CDH23Q9H251 3354 aa7.01□□□□□ -1.29
USP3-212ENST00000559276 PLXNA1Q9UIW2 1896 aa7.01□□□□□ -1.29
USP3-212ENST00000559276 APBB1O00213 710 aa7.01□□□□□ -1.29
USP3-212ENST00000559276 POLR3DP05423 398 aaPredicted RBP7.01□□□□□ -1.29
USP3-212ENST00000559276 ERCC3P19447 782 aa7.01□□□□□ -1.29
USP3-212ENST00000559276 ADORA2AP29274 412 aa7.01□□□□□ -1.29
USP3-212ENST00000559276 DSG3P32926 999 aa7.01□□□□□ -1.29
USP3-212ENST00000559276 MCM4P33991 863 aa7.01□□□□□ -1.29
USP3-212ENST00000559276 CLCN1P35523 988 aa7.01□□□□□ -1.29
USP3-212ENST00000559276 ADD2P35612 726 aa7.01□□□□□ -1.29
USP3-212ENST00000559276 CCNA1P78396 465 aa7.01□□□□□ -1.29
USP3-212ENST00000559276 MDM2Q00987 491 aaPredicted RBP7.01□□□□□ -1.29
USP3-212ENST00000559276 COG2Q14746 738 aa7.01□□□□□ -1.29
USP3-212ENST00000559276 TTF1Q15361 905 aaPredicted RBP7.01□□□□□ -1.29
USP3-212ENST00000559276 SKOR2Q2VWA4 1001 aaPredicted RBP7.01□□□□□ -1.29
USP3-212ENST00000559276 C12orf60Q5U649 245 aa7.01□□□□□ -1.29
USP3-212ENST00000559276 RPAP2Q8IXW5 612 aaPredicted RBP7.01□□□□□ -1.29
USP3-212ENST00000559276 LPAR1Q92633 364 aa7.01□□□□□ -1.29
USP3-212ENST00000559276 SNX21Q969T3 373 aa7.01□□□□□ -1.29
USP3-212ENST00000559276 KIF1BPQ96EK5 621 aa7.01□□□□□ -1.29
USP3-212ENST00000559276 DNAJC2Q99543 621 aaKnown RBP7.01□□□□□ -1.29
USP3-212ENST00000559276 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms