RNA–Protein interactions for RNA: ENST00000559240.5

PBX1-215, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 2,866 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-215ENST00000559240 CALM2P0DP24 149 aa18.92■□□□□ 0.62
PBX1-215ENST00000559240 CALM3P0DP25 149 aa18.92■□□□□ 0.62
PBX1-215ENST00000559240 GABPB1Q06547 395 aaPredicted RBP18.92■□□□□ 0.62
PBX1-215ENST00000559240 C17orf53Q8N3J3 647 aaPredicted RBP18.92■□□□□ 0.62
PBX1-215ENST00000559240 GBP4Q96PP9 640 aa18.92■□□□□ 0.62
PBX1-215ENST00000559240 CSRNP1Q96S65 589 aa18.92■□□□□ 0.62
PBX1-215ENST00000559240 RSPH14Q9UHP6 348 aa18.92■□□□□ 0.62
PBX1-215ENST00000559240 PAPPA2Q9BXP8 1791 aa18.92■□□□□ 0.62
PBX1-215ENST00000559240 KLF18A0A0U1RQI7 1052 aa18.91■□□□□ 0.62
PBX1-215ENST00000559240 PRIMPOLQ96LW4 560 aa18.91■□□□□ 0.62
PBX1-215ENST00000559240 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.91■□□□□ 0.62
PBX1-215ENST00000559240 HIRAP54198 1017 aaPredicted RBP18.91■□□□□ 0.62
PBX1-215ENST00000559240 SMARCC2Q8TAQ2 1214 aa18.91■□□□□ 0.62
PBX1-215ENST00000559240 GPHNQ9NQX3 736 aaPredicted RBP18.91■□□□□ 0.62
PBX1-215ENST00000559240 DDX49Q9Y6V7 483 aaKnown RBP18.91■□□□□ 0.62
PBX1-215ENST00000559240 DHX16O60231 1041 aaKnown RBP18.91■□□□□ 0.62
PBX1-215ENST00000559240 GTF2F1P35269 517 aaKnown RBP eCLIP18.91■□□□□ 0.62
PBX1-215ENST00000559240 VEZTQ9HBM0 779 aa18.91■□□□□ 0.62
PBX1-215ENST00000559240 OGFRQ9NZT2 677 aa18.91■□□□□ 0.62
PBX1-215ENST00000559240 CALCOCO1Q9P1Z2 691 aa18.91■□□□□ 0.62
PBX1-215ENST00000559240 IQCA1LA6NCM1 817 aa18.9■□□□□ 0.62
PBX1-215ENST00000559240 CCDC69A6NI79 296 aa18.9■□□□□ 0.62
PBX1-215ENST00000559240 HMGN5P82970 282 aaKnown RBP18.9■□□□□ 0.62
PBX1-215ENST00000559240 SCRN1Q12765 414 aa18.9■□□□□ 0.62
PBX1-215ENST00000559240 CRACR2BQ8N4Y2 399 aaPredicted RBP18.9■□□□□ 0.62
PBX1-215ENST00000559240 FOXD4L1Q9NU39 408 aa18.9■□□□□ 0.62
PBX1-215ENST00000559240 GTF2A1P52655 376 aaPredicted RBP18.9■□□□□ 0.62
PBX1-215ENST00000559240 RASA3Q14644 834 aa18.9■□□□□ 0.62
PBX1-215ENST00000559240 FAM47AQ5JRC9 791 aa18.9■□□□□ 0.62
PBX1-215ENST00000559240 IFIT1BQ5T764 474 aaKnown RBP18.9■□□□□ 0.62
PBX1-215ENST00000559240 SLC12A7Q9Y666 1083 aa18.9■□□□□ 0.62
PBX1-215ENST00000559240 ATAD5Q96QE3 1844 aa18.89■□□□□ 0.62
PBX1-215ENST00000559240 ZSCAN29Q8IWY8 852 aaPredicted RBP18.89■□□□□ 0.61
PBX1-215ENST00000559240 CCDC39Q9UFE4 941 aa18.89■□□□□ 0.61
PBX1-215ENST00000559240 ZBTB43O43298 467 aa18.89■□□□□ 0.61
PBX1-215ENST00000559240 ZNF654Q8IZM8 581 aa18.89■□□□□ 0.61
PBX1-215ENST00000559240 SYNE3Q6ZMZ3 975 aa18.88■□□□□ 0.61
PBX1-215ENST00000559240 TMEM179Q6ZVK1 233 aa18.88■□□□□ 0.61
PBX1-215ENST00000559240 TMEM39BQ9GZU3 492 aa18.88■□□□□ 0.61
PBX1-215ENST00000559240 SENP2Q9HC62 589 aa18.88■□□□□ 0.61
PBX1-215ENST00000559240 MTMR4Q9NYA4 1195 aa18.88■□□□□ 0.61
PBX1-215ENST00000559240 GOLGA8BA8MQT2 603 aa18.88■□□□□ 0.61
PBX1-215ENST00000559240 TROAPQ12815 778 aa18.88■□□□□ 0.61
PBX1-215ENST00000559240 TERF2Q15554 542 aa18.88■□□□□ 0.61
PBX1-215ENST00000559240 CCDC83Q8IWF9 413 aa18.88■□□□□ 0.61
PBX1-215ENST00000559240 GPATCH11Q8N954 259 aa18.88■□□□□ 0.61
PBX1-215ENST00000559240 MKL1Q969V6 931 aa18.88■□□□□ 0.61
PBX1-215ENST00000559240 DOCK1Q14185 1865 aa18.88■□□□□ 0.61
PBX1-215ENST00000559240 AKR1B1P15121 316 aa18.87■□□□□ 0.61
PBX1-215ENST00000559240 CERKLQ49MI3 558 aaPredicted RBP18.87■□□□□ 0.61
PBX1-215ENST00000559240 NOL8Q76FK4 1167 aaKnown RBP18.87■□□□□ 0.61
PBX1-215ENST00000559240 EGFL6Q8IUX8 553 aa18.87■□□□□ 0.61
PBX1-215ENST00000559240 STK11IPQ8N1F8 1099 aa18.87■□□□□ 0.61
PBX1-215ENST00000559240 DEFB129Q9H1M3 183 aa18.87■□□□□ 0.61
PBX1-215ENST00000559240 EFCC1Q9HA90 598 aa18.87■□□□□ 0.61
PBX1-215ENST00000559240 RBM28Q9NW13 759 aaKnown RBP18.87■□□□□ 0.61
PBX1-215ENST00000559240 NYAP2Q9P242 653 aa18.87■□□□□ 0.61
PBX1-215ENST00000559240 CCDC196A0A1B0GTZ2 297 aa18.87■□□□□ 0.61
PBX1-215ENST00000559240 TOP1P11387 765 aaKnown RBP18.87■□□□□ 0.61
PBX1-215ENST00000559240 SLC4A8Q2Y0W8 1093 aa18.87■□□□□ 0.61
PBX1-215ENST00000559240 RBM26Q5T8P6 1007 aaKnown RBP18.87■□□□□ 0.61
PBX1-215ENST00000559240 ANGEL2Q5VTE6 544 aaKnown RBP18.87■□□□□ 0.61
PBX1-215ENST00000559240 NFXL1Q6ZNB6 911 aa18.87■□□□□ 0.61
PBX1-215ENST00000559240 CATIPQ7Z7H3 387 aa18.87■□□□□ 0.61
PBX1-215ENST00000559240 ZKSCAN3Q9BRR0 538 aa18.87■□□□□ 0.61
PBX1-215ENST00000559240 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.87■□□□□ 0.61
PBX1-215ENST00000559240 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.87■□□□□ 0.61
PBX1-215ENST00000559240 MYH4Q9Y623 1939 aa18.87■□□□□ 0.61
PBX1-215ENST00000559240 STK36Q9NRP7 1315 aa18.87■□□□□ 0.61
PBX1-215ENST00000559240 METAP2P50579 478 aaKnown RBP eCLIP18.87■□□□□ 0.61
PBX1-215ENST00000559240 FAM217BQ9NTX9 383 aaPredicted RBP18.87■□□□□ 0.61
PBX1-215ENST00000559240 ZNF112Q9UJU3 913 aa18.87■□□□□ 0.61
PBX1-215ENST00000559240 ASTN2O75129 1339 aaPredicted RBP18.86■□□□□ 0.61
PBX1-215ENST00000559240 NSUN7Q8NE18 718 aaKnown RBP18.86■□□□□ 0.61
PBX1-215ENST00000559240 FEZ1Q99689 392 aa18.86■□□□□ 0.61
PBX1-215ENST00000559240 LARP6Q9BRS8 491 aaKnown RBP18.86■□□□□ 0.61
PBX1-215ENST00000559240 TSPYL1Q9H0U9 437 aa18.86■□□□□ 0.61
PBX1-215ENST00000559240 GGA3Q9NZ52 723 aa18.86■□□□□ 0.61
PBX1-215ENST00000559240 POTECB2RU33 542 aa18.86■□□□□ 0.61
PBX1-215ENST00000559240 CDKL5O76039 1030 aa18.86■□□□□ 0.61
PBX1-215ENST00000559240 EPHX2P34913 555 aa18.86■□□□□ 0.61
PBX1-215ENST00000559240 PNMA8AQ86V59 439 aaPredicted RBP18.86■□□□□ 0.61
PBX1-215ENST00000559240 NECAB1Q8N987 351 aa18.86■□□□□ 0.61
PBX1-215ENST00000559240 KANSL2Q9H9L4 492 aa18.86■□□□□ 0.61
PBX1-215ENST00000559240 CTDNEP1O95476 244 aa18.85■□□□□ 0.61
PBX1-215ENST00000559240 DCAF15Q66K64 600 aa18.85■□□□□ 0.61
PBX1-215ENST00000559240 CAVIN1Q6NZI2 390 aaKnown RBP18.85■□□□□ 0.61
PBX1-215ENST00000559240 CEP95Q96GE4 821 aa18.85■□□□□ 0.61
PBX1-215ENST00000559240 SSC5DA1L4H1 1573 aa18.85■□□□□ 0.61
PBX1-215ENST00000559240 PHF20L1A8MW92 1017 aa18.85■□□□□ 0.61
PBX1-215ENST00000559240 NMT2O60551 498 aa18.85■□□□□ 0.61
PBX1-215ENST00000559240 TTLL1O95922 423 aa18.85■□□□□ 0.61
PBX1-215ENST00000559240 NTRK3Q16288 839 aa18.85■□□□□ 0.61
PBX1-215ENST00000559240 FANCBQ8NB91 859 aa18.85■□□□□ 0.61
PBX1-215ENST00000559240 TMEM47Q9BQJ4 181 aa18.85■□□□□ 0.61
PBX1-215ENST00000559240 TAF1DQ9H5J8 278 aaPredicted RBP18.85■□□□□ 0.61
PBX1-215ENST00000559240 KAT14Q9H8E8 782 aa18.85■□□□□ 0.61
PBX1-215ENST00000559240 SMC3Q9UQE7 1217 aa18.85■□□□□ 0.61
PBX1-215ENST00000559240 TNNT1P13805 278 aa18.84■□□□□ 0.61
PBX1-215ENST00000559240 ABCB5Q2M3G0 1257 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms