RNA–Protein interactions for RNA: ENST00000558995.5

CPNE6-210, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 2,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-210ENST00000558995 ENAHQ8N8S7 591 aaPredicted RBP15.27■□□□□ 0.04
CPNE6-210ENST00000558995 PLCD4Q9BRC7 762 aa15.27■□□□□ 0.04
CPNE6-210ENST00000558995 BRIP1Q9BX63 1249 aa15.27■□□□□ 0.04
CPNE6-210ENST00000558995 CSRNP2Q9H175 543 aa15.27■□□□□ 0.04
CPNE6-210ENST00000558995 NFE2L3Q9Y4A8 694 aa15.27■□□□□ 0.04
CPNE6-210ENST00000558995 CHD4Q14839 1912 aa15.27■□□□□ 0.04
CPNE6-210ENST00000558995 PRPF3O43395 683 aaKnown RBP15.27■□□□□ 0.03
CPNE6-210ENST00000558995 PCP11498 1178 aaKnown RBP15.27■□□□□ 0.03
CPNE6-210ENST00000558995 ATP2B1P20020 1258 aa15.27■□□□□ 0.03
CPNE6-210ENST00000558995 DYNLL1P63167 89 aaKnown RBP15.27■□□□□ 0.03
CPNE6-210ENST00000558995 FMR1Q06787 632 aaKnown RBP eCLIP15.27■□□□□ 0.03
CPNE6-210ENST00000558995 FUT2Q10981 343 aa15.27■□□□□ 0.03
CPNE6-210ENST00000558995 PKN1Q16512 942 aa15.27■□□□□ 0.03
CPNE6-210ENST00000558995 CATIPQ7Z7H3 387 aa15.27■□□□□ 0.03
CPNE6-210ENST00000558995 SPATA20Q8TB22 786 aa15.27■□□□□ 0.03
CPNE6-210ENST00000558995 CCDC34Q96HJ3 373 aa15.27■□□□□ 0.03
CPNE6-210ENST00000558995 DDX41Q9UJV9 622 aaKnown RBP15.27■□□□□ 0.03
CPNE6-210ENST00000558995 TULP2O00295 520 aa15.26■□□□□ 0.03
CPNE6-210ENST00000558995 TBX2Q13207 712 aaPredicted RBP15.26■□□□□ 0.03
CPNE6-210ENST00000558995 PHF20Q9BVI0 1012 aa15.26■□□□□ 0.03
CPNE6-210ENST00000558995 RBM28Q9NW13 759 aaKnown RBP15.26■□□□□ 0.03
CPNE6-210ENST00000558995 AATFQ9NY61 560 aaKnown RBP eCLIP15.26■□□□□ 0.03
CPNE6-210ENST00000558995 FGRP09769 529 aa15.26■□□□□ 0.03
CPNE6-210ENST00000558995 GYS1P13807 737 aa15.26■□□□□ 0.03
CPNE6-210ENST00000558995 HIBADHP31937 336 aaKnown RBP15.26■□□□□ 0.03
CPNE6-210ENST00000558995 KRT2P35908 639 aa15.26■□□□□ 0.03
CPNE6-210ENST00000558995 IFIT1BQ5T764 474 aaKnown RBP15.26■□□□□ 0.03
CPNE6-210ENST00000558995 PRR5LQ6MZQ0 368 aa15.26■□□□□ 0.03
CPNE6-210ENST00000558995 KRT27Q7Z3Y8 459 aa15.26■□□□□ 0.03
CPNE6-210ENST00000558995 PDILTQ8N807 584 aa15.26■□□□□ 0.03
CPNE6-210ENST00000558995 SHISA4Q96DD7 197 aa15.26■□□□□ 0.03
CPNE6-210ENST00000558995 VPS54Q9P1Q0 977 aa15.26■□□□□ 0.03
CPNE6-210ENST00000558995 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.26■□□□□ 0.03
CPNE6-210ENST00000558995 V9GYY5 206 aaPredicted RBP15.26■□□□□ 0.03
CPNE6-210ENST00000558995 PHLPP2Q6ZVD8 1323 aa15.26■□□□□ 0.03
CPNE6-210ENST00000558995 ARHGAP6O43182 974 aa15.25■□□□□ 0.03
CPNE6-210ENST00000558995 CALM1P0DP23 149 aa15.25■□□□□ 0.03
CPNE6-210ENST00000558995 CALM2P0DP24 149 aa15.25■□□□□ 0.03
CPNE6-210ENST00000558995 CALM3P0DP25 149 aa15.25■□□□□ 0.03
CPNE6-210ENST00000558995 ERCC5P28715 1186 aaPredicted RBP15.25■□□□□ 0.03
CPNE6-210ENST00000558995 ELF2Q15723 593 aa15.25■□□□□ 0.03
CPNE6-210ENST00000558995 CT47A1Q5JQC4 288 aaPredicted RBP15.25■□□□□ 0.03
CPNE6-210ENST00000558995 USP49Q70CQ1 688 aa15.25■□□□□ 0.03
CPNE6-210ENST00000558995 IQCA1Q86XH1 822 aa15.25■□□□□ 0.03
CPNE6-210ENST00000558995 ANKRD2Q9GZV1 360 aa15.25■□□□□ 0.03
CPNE6-210ENST00000558995 ZSCAN12O43309 604 aa15.25■□□□□ 0.03
CPNE6-210ENST00000558995 BMP15O95972 392 aa15.25■□□□□ 0.03
CPNE6-210ENST00000558995 PRDX5P30044 214 aa15.25■□□□□ 0.03
CPNE6-210ENST00000558995 KMT5BQ4FZB7 885 aa15.25■□□□□ 0.03
CPNE6-210ENST00000558995 GRAMD1CQ8IYS0 662 aa15.25■□□□□ 0.03
CPNE6-210ENST00000558995 GPR101Q96P66 508 aaPredicted RBP15.25■□□□□ 0.03
CPNE6-210ENST00000558995 V9GY48 417 aaPredicted RBP15.25■□□□□ 0.03
CPNE6-210ENST00000558995 PLCD1P51178 756 aa15.24■□□□□ 0.03
CPNE6-210ENST00000558995 ZNF827Q17R98 1081 aa15.24■□□□□ 0.03
CPNE6-210ENST00000558995 SPECC1LQ69YQ0 1117 aa15.24■□□□□ 0.03
CPNE6-210ENST00000558995 TMEM139Q8IV31 216 aa15.24■□□□□ 0.03
CPNE6-210ENST00000558995 REXO1L1PQ8IX06 675 aa15.24■□□□□ 0.03
CPNE6-210ENST00000558995 BANK1Q8NDB2 785 aa15.24■□□□□ 0.03
CPNE6-210ENST00000558995 ANKIB1Q9P2G1 1089 aa15.24■□□□□ 0.03
CPNE6-210ENST00000558995 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.24■□□□□ 0.03
CPNE6-210ENST00000558995 TROAPQ12815 778 aa15.24■□□□□ 0.03
CPNE6-210ENST00000558995 TRIM65Q6PJ69 517 aa15.24■□□□□ 0.03
CPNE6-210ENST00000558995 DNAI1Q9UI46 699 aa15.24■□□□□ 0.03
CPNE6-210ENST00000558995 CYP2D7A0A087X1C5 515 aa15.24■□□□□ 0.03
CPNE6-210ENST00000558995 GOLGA8FQ08AF8 430 aa15.24■□□□□ 0.03
CPNE6-210ENST00000558995 GOLGA8DPQ0D2H9 430 aa15.24■□□□□ 0.03
CPNE6-210ENST00000558995 PROM2Q8N271 834 aa15.24■□□□□ 0.03
CPNE6-210ENST00000558995 FERMT2Q96AC1 680 aa15.24■□□□□ 0.03
CPNE6-210ENST00000558995 NSUN4Q96CB9 384 aaKnown RBP15.24■□□□□ 0.03
CPNE6-210ENST00000558995 BRMS1Q9HCU9 246 aa15.24■□□□□ 0.03
CPNE6-210ENST00000558995 FAM205CA6NFA0 338 aa15.23■□□□□ 0.03
CPNE6-210ENST00000558995 STX10O60499 249 aa15.23■□□□□ 0.03
CPNE6-210ENST00000558995 DDAH1O94760 285 aa15.23■□□□□ 0.03
CPNE6-210ENST00000558995 PLEKHA8P1O95397 391 aa15.23■□□□□ 0.03
CPNE6-210ENST00000558995 SLFN14P0C7P3 912 aa15.23■□□□□ 0.03
CPNE6-210ENST00000558995 ADRA2BP18089 450 aa15.23■□□□□ 0.03
CPNE6-210ENST00000558995 MECOMQ03112 1051 aa15.23■□□□□ 0.03
CPNE6-210ENST00000558995 GRAPQ13588 217 aa15.23■□□□□ 0.03
CPNE6-210ENST00000558995 CACNA1SQ13698 1873 aa15.23■□□□□ 0.03
CPNE6-210ENST00000558995 PTPN21Q16825 1174 aa15.23■□□□□ 0.03
CPNE6-210ENST00000558995 HSP90AA4PQ58FG1 418 aa15.23■□□□□ 0.03
CPNE6-210ENST00000558995 TRMT44Q8IYL2 757 aaKnown RBP15.23■□□□□ 0.03
CPNE6-210ENST00000558995 GRAPLQ8TC17 118 aaPredicted RBP15.23■□□□□ 0.03
CPNE6-210ENST00000558995 DHX58Q96C10 678 aa15.23■□□□□ 0.03
CPNE6-210ENST00000558995 MED15Q96RN5 788 aa15.23■□□□□ 0.03
CPNE6-210ENST00000558995 BAG1Q99933 345 aaPredicted RBP15.23■□□□□ 0.03
CPNE6-210ENST00000558995 SEMA3EO15041 775 aa15.23■□□□□ 0.03
CPNE6-210ENST00000558995 EVX2Q03828 476 aa15.23■□□□□ 0.03
CPNE6-210ENST00000558995 EARS2Q5JPH6 523 aaKnown RBP15.23■□□□□ 0.03
CPNE6-210ENST00000558995 CTR9Q6PD62 1173 aa15.23■□□□□ 0.03
CPNE6-210ENST00000558995 FBXO38Q6PIJ6 1188 aa15.23■□□□□ 0.03
CPNE6-210ENST00000558995 CCDC66A2RUB6 948 aa15.22■□□□□ 0.03
CPNE6-210ENST00000558995 PRDM1O75626 825 aa15.22■□□□□ 0.03
CPNE6-210ENST00000558995 TMTC3Q6ZXV5 915 aa15.22■□□□□ 0.03
CPNE6-210ENST00000558995 SH3RF1Q7Z6J0 888 aa15.22■□□□□ 0.03
CPNE6-210ENST00000558995 EPSTI1Q96J88 318 aa15.22■□□□□ 0.03
CPNE6-210ENST00000558995 SAMSN1Q9NSI8 373 aaKnown RBP15.22■□□□□ 0.03
CPNE6-210ENST00000558995 PPP2R2CQ9Y2T4 447 aa15.22■□□□□ 0.03
CPNE6-210ENST00000558995 IRS2Q9Y4H2 1338 aa15.22■□□□□ 0.03
CPNE6-210ENST00000558995 hCG_1642624A0A1W2PR95 340 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms