RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 VPS37CA5D8V6 355 aaPredicted RBP8.95□□□□□ -0.98
LRRC28-211ENST00000558890 IGF2BP3O00425 579 aaKnown RBP eCLIP8.95□□□□□ -0.98
LRRC28-211ENST00000558890 FOXN1O15353 648 aa8.95□□□□□ -0.98
LRRC28-211ENST00000558890 LARGE1O95461 756 aa8.95□□□□□ -0.98
LRRC28-211ENST00000558890 GUCY1A2P33402 732 aa8.95□□□□□ -0.98
LRRC28-211ENST00000558890 CAP2P40123 477 aa8.95□□□□□ -0.98
LRRC28-211ENST00000558890 NOVP48745 357 aa8.95□□□□□ -0.98
LRRC28-211ENST00000558890 RCAN1P53805 252 aa8.95□□□□□ -0.98
LRRC28-211ENST00000558890 MAP2K1Q02750 393 aaPredicted RBP8.95□□□□□ -0.98
LRRC28-211ENST00000558890 PPATQ06203 517 aa8.95□□□□□ -0.98
LRRC28-211ENST00000558890 TRDNQ13061 729 aa8.95□□□□□ -0.98
LRRC28-211ENST00000558890 PPIL2Q13356 520 aa8.95□□□□□ -0.98
LRRC28-211ENST00000558890 ME3Q16798 604 aa8.95□□□□□ -0.98
LRRC28-211ENST00000558890 LRSAM1Q6UWE0 723 aa8.95□□□□□ -0.98
LRRC28-211ENST00000558890 MFSD6Q6ZSS7 791 aa8.95□□□□□ -0.98
LRRC28-211ENST00000558890 SIAH1Q8IUQ4 282 aa8.95□□□□□ -0.98
LRRC28-211ENST00000558890 ZSCAN29Q8IWY8 852 aaPredicted RBP8.95□□□□□ -0.98
LRRC28-211ENST00000558890 SCYL3Q8IZE3 742 aa8.95□□□□□ -0.98
LRRC28-211ENST00000558890 NCOA7Q8NI08 942 aa8.95□□□□□ -0.98
LRRC28-211ENST00000558890 BRI3BPQ8WY22 251 aa8.95□□□□□ -0.98
LRRC28-211ENST00000558890 ESR2Q92731 530 aa8.95□□□□□ -0.98
LRRC28-211ENST00000558890 CHMP4CQ96CF2 233 aa8.95□□□□□ -0.98
LRRC28-211ENST00000558890 OPTNQ96CV9 577 aa8.95□□□□□ -0.98
LRRC28-211ENST00000558890 NEK1Q96PY6 1258 aa8.95□□□□□ -0.98
LRRC28-211ENST00000558890 LARP6Q9BRS8 491 aaKnown RBP8.95□□□□□ -0.98
LRRC28-211ENST00000558890 CFHR5Q9BXR6 569 aa8.95□□□□□ -0.98
LRRC28-211ENST00000558890 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.95□□□□□ -0.98
LRRC28-211ENST00000558890 RNF186Q9NXI6 227 aa8.95□□□□□ -0.98
LRRC28-211ENST00000558890 RBM27Q9P2N5 1060 aaKnown RBP8.95□□□□□ -0.98
LRRC28-211ENST00000558890 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.95□□□□□ -0.98
LRRC28-211ENST00000558890 TPCN1Q9ULQ1 816 aa8.95□□□□□ -0.98
LRRC28-211ENST00000558890 PHIPQ8WWQ0 1821 aa8.94□□□□□ -0.98
LRRC28-211ENST00000558890 CXCL11O14625 94 aa8.94□□□□□ -0.98
LRRC28-211ENST00000558890 LETM1O95202 739 aaPredicted RBP8.94□□□□□ -0.98
LRRC28-211ENST00000558890 ASNSP08243 561 aa8.94□□□□□ -0.98
LRRC28-211ENST00000558890 HSPA1AP0DMV8 641 aaKnown RBP8.94□□□□□ -0.98
LRRC28-211ENST00000558890 HSPA1BP0DMV9 641 aaKnown RBP8.94□□□□□ -0.98
LRRC28-211ENST00000558890 INHBEP58166 350 aa8.94□□□□□ -0.98
LRRC28-211ENST00000558890 UBE2HP62256 183 aa8.94□□□□□ -0.98
LRRC28-211ENST00000558890 FGD1P98174 961 aa8.94□□□□□ -0.98
LRRC28-211ENST00000558890 FOXD4L6Q3SYB3 417 aaPredicted RBP8.94□□□□□ -0.98
LRRC28-211ENST00000558890 GPAT2Q6NUI2 795 aa8.94□□□□□ -0.98
LRRC28-211ENST00000558890 FOXD4L3Q6VB84 417 aaPredicted RBP8.94□□□□□ -0.98
LRRC28-211ENST00000558890 TMEM179Q6ZVK1 233 aa8.94□□□□□ -0.98
LRRC28-211ENST00000558890 TMTC2Q8N394 836 aa8.94□□□□□ -0.98
LRRC28-211ENST00000558890 DYNLL2Q96FJ2 89 aa8.94□□□□□ -0.98
LRRC28-211ENST00000558890 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.94□□□□□ -0.98
LRRC28-211ENST00000558890 TRIM34Q9BYJ4 488 aa8.94□□□□□ -0.98
LRRC28-211ENST00000558890 NBPF3Q9H094 633 aa8.94□□□□□ -0.98
LRRC28-211ENST00000558890 TSPY26PQ9H489 355 aa8.94□□□□□ -0.98
LRRC28-211ENST00000558890 TMEM63CQ9P1W3 806 aa8.94□□□□□ -0.98
LRRC28-211ENST00000558890 MTMR6Q9Y217 621 aa8.94□□□□□ -0.98
LRRC28-211ENST00000558890 KIF3AQ9Y496 699 aa8.94□□□□□ -0.98
LRRC28-211ENST00000558890 SYCE3A1L190 88 aa8.93□□□□□ -0.98
LRRC28-211ENST00000558890 E7EWF7 191 aa8.93□□□□□ -0.98
LRRC28-211ENST00000558890 FIBPO43427 364 aa8.93□□□□□ -0.98
LRRC28-211ENST00000558890 HSPA8P11142 646 aaKnown RBP8.93□□□□□ -0.98
LRRC28-211ENST00000558890 CDK8P49336 464 aa8.93□□□□□ -0.98
LRRC28-211ENST00000558890 MKRN3Q13064 507 aaKnown RBP8.93□□□□□ -0.98
LRRC28-211ENST00000558890 GRM1Q13255 1194 aa8.93□□□□□ -0.98
LRRC28-211ENST00000558890 SART3Q15020 963 aaKnown RBP8.93□□□□□ -0.98
LRRC28-211ENST00000558890 CCDC183Q5T5S1 534 aa8.93□□□□□ -0.98
LRRC28-211ENST00000558890 LARP1BQ659C4 914 aaKnown RBP8.93□□□□□ -0.98
LRRC28-211ENST00000558890 PAXIP1Q6ZW49 1069 aaPredicted RBP8.93□□□□□ -0.98
LRRC28-211ENST00000558890 RALYLQ86SE5 291 aaKnown RBP8.93□□□□□ -0.98
LRRC28-211ENST00000558890 CCDC84Q86UT8 332 aaPredicted RBP8.93□□□□□ -0.98
LRRC28-211ENST00000558890 IQCA1Q86XH1 822 aa8.93□□□□□ -0.98
LRRC28-211ENST00000558890 DGKHQ86XP1 1220 aa8.93□□□□□ -0.98
LRRC28-211ENST00000558890 IFNL1Q8IU54 200 aa8.93□□□□□ -0.98
LRRC28-211ENST00000558890 TBC1D10CQ8IV04 446 aa8.93□□□□□ -0.98
LRRC28-211ENST00000558890 CRACR2BQ8N4Y2 399 aaPredicted RBP8.93□□□□□ -0.98
LRRC28-211ENST00000558890 NECAB1Q8N987 351 aa8.93□□□□□ -0.98
LRRC28-211ENST00000558890 SLC44A5Q8NCS7 719 aa8.93□□□□□ -0.98
LRRC28-211ENST00000558890 NEDD1Q8NHV4 660 aa8.93□□□□□ -0.98
LRRC28-211ENST00000558890 NKX2-3Q8TAU0 364 aa8.93□□□□□ -0.98
LRRC28-211ENST00000558890 ANKS1AQ92625 1134 aa8.93□□□□□ -0.98
LRRC28-211ENST00000558890 TMEM87BQ96K49 555 aa8.93□□□□□ -0.98
LRRC28-211ENST00000558890 PPP1R9BQ96SB3 815 aa8.93□□□□□ -0.98
LRRC28-211ENST00000558890 WDR18Q9BV38 432 aa8.93□□□□□ -0.98
LRRC28-211ENST00000558890 AGXT2Q9BYV1 514 aa8.93□□□□□ -0.98
LRRC28-211ENST00000558890 CNPY2Q9Y2B0 182 aa8.93□□□□□ -0.98
LRRC28-211ENST00000558890 CSADQ9Y600 493 aa8.93□□□□□ -0.98
LRRC28-211ENST00000558890 ZHX2Q9Y6X8 837 aa8.93□□□□□ -0.98
LRRC28-211ENST00000558890 PTPRFP10586 1907 aa8.92□□□□□ -0.98
LRRC28-211ENST00000558890 MYH4Q9Y623 1939 aa8.92□□□□□ -0.98
LRRC28-211ENST00000558890 LOC285556D6RIA3 1793 aa8.92□□□□□ -0.98
LRRC28-211ENST00000558890 NID2Q14112 1375 aa8.92□□□□□ -0.98
LRRC28-211ENST00000558890 A0A0G2JLL6 359 aaPredicted RBP8.92□□□□□ -0.98
LRRC28-211ENST00000558890 MANSC4A6NHS7 340 aaPredicted RBP8.92□□□□□ -0.98
LRRC28-211ENST00000558890 MINDY4BA8MYZ0 360 aa8.92□□□□□ -0.98
LRRC28-211ENST00000558890 BTBD19C9JJ37 291 aa8.92□□□□□ -0.98
LRRC28-211ENST00000558890 RASA1P20936 1047 aa8.92□□□□□ -0.98
LRRC28-211ENST00000558890 MCM5P33992 734 aa8.92□□□□□ -0.98
LRRC28-211ENST00000558890 LIFRP42702 1097 aa8.92□□□□□ -0.98
LRRC28-211ENST00000558890 VASPP50552 380 aaPredicted RBP8.92□□□□□ -0.98
LRRC28-211ENST00000558890 EVCP57679 992 aa8.92□□□□□ -0.98
LRRC28-211ENST00000558890 KRT85P78386 507 aa8.92□□□□□ -0.98
LRRC28-211ENST00000558890 ST3GAL1Q11201 340 aa8.92□□□□□ -0.98
LRRC28-211ENST00000558890 SLC4A8Q2Y0W8 1093 aa8.92□□□□□ -0.98
LRRC28-211ENST00000558890 SH3D19Q5HYK7 790 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms