RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 OSBP2Q969R2 916 aa16.35■□□□□ 0.21
VPS18-203ENST00000558855 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.35■□□□□ 0.21
VPS18-203ENST00000558855 EPB41L4AQ9HCS5 686 aaPredicted RBP16.35■□□□□ 0.21
VPS18-203ENST00000558855 SLC4A4Q9Y6R1 1079 aa16.35■□□□□ 0.21
VPS18-203ENST00000558855 XRCC5P13010 732 aaKnown RBP16.34■□□□□ 0.21
VPS18-203ENST00000558855 TMEM179Q6ZVK1 233 aa16.34■□□□□ 0.21
VPS18-203ENST00000558855 C16orf86Q6ZW13 317 aa16.34■□□□□ 0.21
VPS18-203ENST00000558855 SPICE1Q8N0Z3 855 aa16.34■□□□□ 0.21
VPS18-203ENST00000558855 APBA2Q99767 749 aa16.34■□□□□ 0.21
VPS18-203ENST00000558855 HMX1Q9NP08 348 aaPredicted RBP16.34■□□□□ 0.21
VPS18-203ENST00000558855 ATP8A2Q9NTI2 1148 aa16.34■□□□□ 0.21
VPS18-203ENST00000558855 ECHDC1Q9NTX5 307 aa16.34■□□□□ 0.21
VPS18-203ENST00000558855 PFASO15067 1338 aa16.34■□□□□ 0.21
VPS18-203ENST00000558855 GSG1L2A8MUP6 293 aa16.33■□□□□ 0.2
VPS18-203ENST00000558855 M0R2C6 588 aa16.33■□□□□ 0.2
VPS18-203ENST00000558855 ZKSCAN1P17029 563 aaPredicted RBP16.33■□□□□ 0.2
VPS18-203ENST00000558855 PTPREP23469 700 aa16.33■□□□□ 0.2
VPS18-203ENST00000558855 MAP2K5Q13163 448 aa16.33■□□□□ 0.2
VPS18-203ENST00000558855 LHX8Q68G74 356 aa16.33■□□□□ 0.2
VPS18-203ENST00000558855 STK11IPQ8N1F8 1099 aa16.33■□□□□ 0.2
VPS18-203ENST00000558855 TRPV1Q8NER1 839 aa16.33■□□□□ 0.2
VPS18-203ENST00000558855 GTF3C2Q8WUA4 911 aaPredicted RBP16.33■□□□□ 0.2
VPS18-203ENST00000558855 ATG4CQ96DT6 458 aa16.33■□□□□ 0.2
VPS18-203ENST00000558855 STRBPQ96SI9 672 aaKnown RBP16.33■□□□□ 0.2
VPS18-203ENST00000558855 HTATIP2Q9BUP3 242 aa16.33■□□□□ 0.2
VPS18-203ENST00000558855 MOV10L1Q9BXT6 1211 aaKnown RBP16.33■□□□□ 0.2
VPS18-203ENST00000558855 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.33■□□□□ 0.2
VPS18-203ENST00000558855 CHMP4BQ9H444 224 aaKnown RBP16.33■□□□□ 0.2
VPS18-203ENST00000558855 SWAP70Q9UH65 585 aa16.33■□□□□ 0.2
VPS18-203ENST00000558855 OGDHLQ9ULD0 1010 aa16.33■□□□□ 0.2
VPS18-203ENST00000558855 IGHA2P01877 340 aa16.32■□□□□ 0.2
VPS18-203ENST00000558855 RGS2P41220 211 aa16.32■□□□□ 0.2
VPS18-203ENST00000558855 ICA1Q05084 483 aa16.32■□□□□ 0.2
VPS18-203ENST00000558855 GRB14Q14449 540 aa16.32■□□□□ 0.2
VPS18-203ENST00000558855 WDR78Q5VTH9 848 aa16.32■□□□□ 0.2
VPS18-203ENST00000558855 KBTBD3Q8NAB2 608 aa16.32■□□□□ 0.2
VPS18-203ENST00000558855 PI4K2BQ8TCG2 481 aa16.32■□□□□ 0.2
VPS18-203ENST00000558855 TANGO6Q9C0B7 1094 aa16.32■□□□□ 0.2
VPS18-203ENST00000558855 FBXO28Q9NVF7 368 aa16.32■□□□□ 0.2
VPS18-203ENST00000558855 TMX2Q9Y320 296 aa16.32■□□□□ 0.2
VPS18-203ENST00000558855 SALL3Q9BXA9 1300 aa16.31■□□□□ 0.2
VPS18-203ENST00000558855 SEC62Q99442 399 aaKnown RBP16.31■□□□□ 0.2
VPS18-203ENST00000558855 ROBO3Q96MS0 1386 aa16.3■□□□□ 0.2
VPS18-203ENST00000558855 SLC15A5A6NIM6 579 aa16.3■□□□□ 0.2
VPS18-203ENST00000558855 EEF2P13639 858 aaKnown RBP16.3■□□□□ 0.2
VPS18-203ENST00000558855 RASA1P20936 1047 aa16.3■□□□□ 0.2
VPS18-203ENST00000558855 DSG3P32926 999 aa16.3■□□□□ 0.2
VPS18-203ENST00000558855 CYP2C19P33261 490 aa16.3■□□□□ 0.2
VPS18-203ENST00000558855 NECAB2Q7Z6G3 386 aa16.3■□□□□ 0.2
VPS18-203ENST00000558855 C7orf61Q8IZ16 206 aa16.3■□□□□ 0.2
VPS18-203ENST00000558855 VCPKMTQ9H867 229 aa16.3■□□□□ 0.2
VPS18-203ENST00000558855 LTBP2Q14767 1821 aa16.3■□□□□ 0.2
VPS18-203ENST00000558855 SMCHD1A6NHR9 2005 aa16.29■□□□□ 0.2
VPS18-203ENST00000558855 EVI5O60447 810 aa16.29■□□□□ 0.2
VPS18-203ENST00000558855 COBLO75128 1261 aa16.29■□□□□ 0.2
VPS18-203ENST00000558855 RRP1P56182 461 aaKnown RBP16.29■□□□□ 0.2
VPS18-203ENST00000558855 COG2Q14746 738 aa16.29■□□□□ 0.2
VPS18-203ENST00000558855 SAMD1Q6SPF0 538 aaPredicted RBP16.29■□□□□ 0.2
VPS18-203ENST00000558855 ANKLE1Q8NAG6 615 aa16.29■□□□□ 0.2
VPS18-203ENST00000558855 APPBP2Q92624 585 aa16.29■□□□□ 0.2
VPS18-203ENST00000558855 CRBNQ96SW2 442 aa16.29■□□□□ 0.2
VPS18-203ENST00000558855 SPATC1LQ9H0A9 340 aa16.29■□□□□ 0.2
VPS18-203ENST00000558855 ZMYND8Q9ULU4 1186 aaPredicted RBP16.29■□□□□ 0.2
VPS18-203ENST00000558855 LAMA3Q16787 3333 aa16.29■□□□□ 0.2
VPS18-203ENST00000558855 SOX1O00570 391 aaPredicted RBP16.28■□□□□ 0.2
VPS18-203ENST00000558855 FOXP2O15409 715 aa16.28■□□□□ 0.2
VPS18-203ENST00000558855 RNF113AO15541 343 aaKnown RBP16.28■□□□□ 0.2
VPS18-203ENST00000558855 GPAA1O43292 621 aa16.28■□□□□ 0.2
VPS18-203ENST00000558855 HOXC6P09630 235 aa16.28■□□□□ 0.2
VPS18-203ENST00000558855 COL6A1P12109 1028 aa16.28■□□□□ 0.2
VPS18-203ENST00000558855 SYN1P17600 705 aa16.28■□□□□ 0.2
VPS18-203ENST00000558855 ERCC3P19447 782 aa16.28■□□□□ 0.2
VPS18-203ENST00000558855 TMEM132BQ14DG7 1078 aa16.28■□□□□ 0.2
VPS18-203ENST00000558855 CCAR1Q8IX12 1150 aaKnown RBP16.28■□□□□ 0.2
VPS18-203ENST00000558855 NUP88Q99567 741 aaPredicted RBP16.28■□□□□ 0.2
VPS18-203ENST00000558855 C11orf49Q9H6J7 331 aa16.28■□□□□ 0.2
VPS18-203ENST00000558855 ARHGEF10LQ9HCE6 1279 aa16.28■□□□□ 0.2
VPS18-203ENST00000558855 STAP2Q9UGK3 403 aa16.28■□□□□ 0.2
VPS18-203ENST00000558855 MCM3APO60318 1980 aa16.27■□□□□ 0.2
VPS18-203ENST00000558855 FLOT1O75955 427 aa16.27■□□□□ 0.2
VPS18-203ENST00000558855 ADORA2AP29274 412 aa16.27■□□□□ 0.2
VPS18-203ENST00000558855 CCNA1P78396 465 aa16.27■□□□□ 0.2
VPS18-203ENST00000558855 ATP2B2Q01814 1243 aa16.27■□□□□ 0.2
VPS18-203ENST00000558855 SBK1Q52WX2 424 aa16.27■□□□□ 0.2
VPS18-203ENST00000558855 ZSCAN25Q6NSZ9 544 aa16.27■□□□□ 0.2
VPS18-203ENST00000558855 REPS2Q8NFH8 660 aa16.27■□□□□ 0.2
VPS18-203ENST00000558855 CCDC17Q96LX7 622 aa16.27■□□□□ 0.2
VPS18-203ENST00000558855 NBPF3Q9H094 633 aa16.27■□□□□ 0.2
VPS18-203ENST00000558855 CWC22Q9HCG8 908 aaKnown RBP16.27■□□□□ 0.2
VPS18-203ENST00000558855 ARPP21Q9UBL0 812 aaPredicted RBP16.27■□□□□ 0.2
VPS18-203ENST00000558855 TACC3Q9Y6A5 838 aa16.27■□□□□ 0.2
VPS18-203ENST00000558855 IGKV6D-41A0A0C4DH26 115 aa16.26■□□□□ 0.19
VPS18-203ENST00000558855 MINDY4BA8MYZ0 360 aa16.26■□□□□ 0.19
VPS18-203ENST00000558855 WDR46O15213 610 aaKnown RBP16.26■□□□□ 0.19
VPS18-203ENST00000558855 PRDM1O75626 825 aa16.26■□□□□ 0.19
VPS18-203ENST00000558855 CYBAP13498 195 aa16.26■□□□□ 0.19
VPS18-203ENST00000558855 PLS1Q14651 629 aa16.26■□□□□ 0.19
VPS18-203ENST00000558855 LRRC26Q2I0M4 334 aa16.26■□□□□ 0.19
VPS18-203ENST00000558855 FAM83BQ5T0W9 1011 aa16.26■□□□□ 0.19
VPS18-203ENST00000558855 CCDC129Q6ZRS4 1044 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms