RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 SLC44A5Q8NCS7 719 aa13.91□□□□□ -0.18
CASC4-205ENST00000558735 FEZ1Q99689 392 aa13.91□□□□□ -0.18
CASC4-205ENST00000558735 DCTPP1Q9H773 170 aa13.91□□□□□ -0.18
CASC4-205ENST00000558735 ATP8A2Q9NTI2 1148 aa13.91□□□□□ -0.18
CASC4-205ENST00000558735 RABGAP1Q9Y3P9 1069 aa13.91□□□□□ -0.18
CASC4-205ENST00000558735 PLXNB2O15031 1838 aa13.91□□□□□ -0.18
CASC4-205ENST00000558735 VCAM1P19320 739 aa13.9□□□□□ -0.18
CASC4-205ENST00000558735 UBE3CQ15386 1083 aa13.9□□□□□ -0.18
CASC4-205ENST00000558735 MORN1Q5T089 497 aa13.9□□□□□ -0.18
CASC4-205ENST00000558735 C12orf60Q5U649 245 aa13.9□□□□□ -0.18
CASC4-205ENST00000558735 GPR142Q7Z601 462 aa13.9□□□□□ -0.18
CASC4-205ENST00000558735 GTF3C2Q8WUA4 911 aaPredicted RBP13.9□□□□□ -0.18
CASC4-205ENST00000558735 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.9□□□□□ -0.187e-14■■□□□ 14.2
CASC4-205ENST00000558735 PRUNE2Q8WUY3 3088 aa13.9□□□□□ -0.18
CASC4-205ENST00000558735 SPTBN5Q9NRC6 3674 aaKnown RBP13.9□□□□□ -0.18
CASC4-205ENST00000558735 CYP2D7A0A087X1C5 515 aa13.89□□□□□ -0.19
CASC4-205ENST00000558735 USP17L12C9JPN9 530 aa13.89□□□□□ -0.19
CASC4-205ENST00000558735 USP17L21D6R901 530 aa13.89□□□□□ -0.19
CASC4-205ENST00000558735 MPHOSPH10O00566 681 aaKnown RBP13.89□□□□□ -0.19
CASC4-205ENST00000558735 KIAA1755Q5JYT7 1200 aa13.89□□□□□ -0.19
CASC4-205ENST00000558735 LBX2Q6XYB7 198 aa13.89□□□□□ -0.19
CASC4-205ENST00000558735 PLEKHH3Q7Z736 793 aa13.89□□□□□ -0.19
CASC4-205ENST00000558735 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.89□□□□□ -0.19
CASC4-205ENST00000558735 CCAR1Q8IX12 1150 aaKnown RBP13.89□□□□□ -0.19
CASC4-205ENST00000558735 PUS7LQ9H0K6 701 aaKnown RBP13.89□□□□□ -0.19
CASC4-205ENST00000558735 RPAP3Q9H6T3 665 aaPredicted RBP13.89□□□□□ -0.19
CASC4-205ENST00000558735 BTBD7Q9P203 1132 aa13.89□□□□□ -0.19
CASC4-205ENST00000558735 SWAP70Q9UH65 585 aa13.89□□□□□ -0.19
CASC4-205ENST00000558735 CDK8P49336 464 aa13.88□□□□□ -0.19
CASC4-205ENST00000558735 CACNB2Q08289 660 aaPredicted RBP13.88□□□□□ -0.19
CASC4-205ENST00000558735 CCL14Q16627 93 aa13.88□□□□□ -0.19
CASC4-205ENST00000558735 LRRC26Q2I0M4 334 aa13.88□□□□□ -0.19
CASC4-205ENST00000558735 GUCD1Q96NT3 240 aa13.88□□□□□ -0.19
CASC4-205ENST00000558735 ECHDC1Q9NTX5 307 aa13.88□□□□□ -0.19
CASC4-205ENST00000558735 SPDYE16A6NNV3 312 aaPredicted RBP13.87□□□□□ -0.19
CASC4-205ENST00000558735 AKR1B1P15121 316 aa13.87□□□□□ -0.19
CASC4-205ENST00000558735 ZKSCAN1P17029 563 aaPredicted RBP13.87□□□□□ -0.19
CASC4-205ENST00000558735 COG2Q14746 738 aa13.87□□□□□ -0.19
CASC4-205ENST00000558735 ZSCAN25Q6NSZ9 544 aa13.87□□□□□ -0.19
CASC4-205ENST00000558735 CTR9Q6PD62 1173 aa13.87□□□□□ -0.19
CASC4-205ENST00000558735 TMEM179Q6ZVK1 233 aa13.87□□□□□ -0.19
CASC4-205ENST00000558735 HOXC10Q9NYD6 342 aa13.87□□□□□ -0.19
CASC4-205ENST00000558735 PCDHB15Q9Y5E8 787 aa13.87□□□□□ -0.19
CASC4-205ENST00000558735 SLC4A4Q9Y6R1 1079 aa13.87□□□□□ -0.19
CASC4-205ENST00000558735 PTPREP23469 700 aa13.86□□□□□ -0.19
CASC4-205ENST00000558735 RGS2P41220 211 aa13.86□□□□□ -0.19
CASC4-205ENST00000558735 CCNA1P78396 465 aa13.86□□□□□ -0.19
CASC4-205ENST00000558735 MAP2K5Q13163 448 aa13.86□□□□□ -0.19
CASC4-205ENST00000558735 CLEC10AQ8IUN9 316 aa13.86□□□□□ -0.19
CASC4-205ENST00000558735 CCDC17Q96LX7 622 aa13.86□□□□□ -0.19
CASC4-205ENST00000558735 STRBPQ96SI9 672 aaKnown RBP13.86□□□□□ -0.19
CASC4-205ENST00000558735 TMX2Q9Y320 296 aa13.86□□□□□ -0.19
CASC4-205ENST00000558735 SLC15A5A6NIM6 579 aa13.85□□□□□ -0.19
CASC4-205ENST00000558735 TSHZ3Q63HK5 1081 aa13.85□□□□□ -0.19
CASC4-205ENST00000558735 C16orf86Q6ZW13 317 aa13.85□□□□□ -0.19
CASC4-205ENST00000558735 KBTBD3Q8NAB2 608 aa13.85□□□□□ -0.19
CASC4-205ENST00000558735 OSBP2Q969R2 916 aa13.85□□□□□ -0.19
CASC4-205ENST00000558735 APBA2Q99767 749 aa13.85□□□□□ -0.19
CASC4-205ENST00000558735 FLRT1Q9NZU1 646 aa13.85□□□□□ -0.19
CASC4-205ENST00000558735 GSG1L2A8MUP6 293 aa13.84□□□□□ -0.19
CASC4-205ENST00000558735 GLRX3O76003 335 aaKnown RBP13.84□□□□□ -0.19
CASC4-205ENST00000558735 CCND3P30281 292 aaPredicted RBP13.84□□□□□ -0.19
CASC4-205ENST00000558735 DSG3P32926 999 aa13.84□□□□□ -0.19
CASC4-205ENST00000558735 MDM2Q00987 491 aaPredicted RBP13.84□□□□□ -0.19
CASC4-205ENST00000558735 WDR78Q5VTH9 848 aa13.84□□□□□ -0.19
CASC4-205ENST00000558735 NPLOC4Q8TAT6 608 aa13.84□□□□□ -0.19
CASC4-205ENST00000558735 MOV10L1Q9BXT6 1211 aaKnown RBP13.84□□□□□ -0.19
CASC4-205ENST00000558735 CWC22Q9HCG8 908 aaKnown RBP13.84□□□□□ -0.19
CASC4-205ENST00000558735 RNF113AO15541 343 aaKnown RBP13.83□□□□□ -0.2
CASC4-205ENST00000558735 IGHA2P01877 340 aa13.83□□□□□ -0.2
CASC4-205ENST00000558735 HOXC6P09630 235 aa13.83□□□□□ -0.2
CASC4-205ENST00000558735 EEF2P13639 858 aaKnown RBP13.83□□□□□ -0.2
CASC4-205ENST00000558735 ICA1Q05084 483 aa13.83□□□□□ -0.2
CASC4-205ENST00000558735 GRB14Q14449 540 aa13.83□□□□□ -0.2
CASC4-205ENST00000558735 SBK1Q52WX2 424 aa13.83□□□□□ -0.2
CASC4-205ENST00000558735 AMOTL1Q8IY63 956 aa13.83□□□□□ -0.2
CASC4-205ENST00000558735 SPICE1Q8N0Z3 855 aa13.83□□□□□ -0.2
CASC4-205ENST00000558735 LPAR1Q92633 364 aa13.83□□□□□ -0.2
CASC4-205ENST00000558735 DDRGK1Q96HY6 314 aa13.83□□□□□ -0.2
CASC4-205ENST00000558735 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.83□□□□□ -0.2
CASC4-205ENST00000558735 TANGO6Q9C0B7 1094 aa13.83□□□□□ -0.2
CASC4-205ENST00000558735 VCPKMTQ9H867 229 aa13.83□□□□□ -0.2
CASC4-205ENST00000558735 ARHGEF10LQ9HCE6 1279 aa13.83□□□□□ -0.2
CASC4-205ENST00000558735 STRNO43815 780 aa13.82□□□□□ -0.2
CASC4-205ENST00000558735 MSCO60682 206 aa13.82□□□□□ -0.2
CASC4-205ENST00000558735 GIMAP6Q6P9H5 292 aa13.82□□□□□ -0.2
CASC4-205ENST00000558735 OTUD7AQ8TE49 926 aaPredicted RBP13.82□□□□□ -0.2
CASC4-205ENST00000558735 APPBP2Q92624 585 aa13.82□□□□□ -0.2
CASC4-205ENST00000558735 LBHD1Q9BQE6 289 aaPredicted RBP13.82□□□□□ -0.2
CASC4-205ENST00000558735 SPATC1LQ9H0A9 340 aa13.82□□□□□ -0.2
CASC4-205ENST00000558735 KANSL2Q9H9L4 492 aa13.82□□□□□ -0.2
CASC4-205ENST00000558735 IVNS1ABPQ9Y6Y0 642 aa13.82□□□□□ -0.2
CASC4-205ENST00000558735 NAV1Q8NEY1 1877 aa13.81□□□□□ -0.2
CASC4-205ENST00000558735 DNM1LO00429 736 aa13.81□□□□□ -0.2
CASC4-205ENST00000558735 ERCC3P19447 782 aa13.81□□□□□ -0.2
CASC4-205ENST00000558735 ATP2B2Q01814 1243 aa13.81□□□□□ -0.2
CASC4-205ENST00000558735 MFSD14CQ5VZR4 134 aa13.81□□□□□ -0.2
CASC4-205ENST00000558735 STK11IPQ8N1F8 1099 aa13.81□□□□□ -0.2
CASC4-205ENST00000558735 ATG4CQ96DT6 458 aa13.81□□□□□ -0.2
CASC4-205ENST00000558735 GPATCH3Q96I76 525 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms