RNA–Protein interactions for RNA: ENST00000558321.5

CDC42BPB-202, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 528 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-202ENST00000558321 LPAR1Q92633 364 aa14.79□□□□□ -0.04
CDC42BPB-202ENST00000558321 ZNF287Q9HBT7 754 aa14.79□□□□□ -0.04
CDC42BPB-202ENST00000558321 SGPL1O95470 568 aa14.78□□□□□ -0.04
CDC42BPB-202ENST00000558321 HMGCRP04035 888 aa14.78□□□□□ -0.04
CDC42BPB-202ENST00000558321 EEF2P13639 858 aaKnown RBP14.78□□□□□ -0.04
CDC42BPB-202ENST00000558321 PDE1AP54750 535 aa14.78□□□□□ -0.04
CDC42BPB-202ENST00000558321 B4GALNT3Q6L9W6 998 aa14.78□□□□□ -0.04
CDC42BPB-202ENST00000558321 POTEEQ6S8J3 1075 aa14.78□□□□□ -0.04
CDC42BPB-202ENST00000558321 IFNL3Q8IZI9 196 aa14.78□□□□□ -0.04
CDC42BPB-202ENST00000558321 ZNF444Q8N0Y2 327 aaPredicted RBP14.78□□□□□ -0.04
CDC42BPB-202ENST00000558321 EXOC6Q8TAG9 804 aa14.78□□□□□ -0.04
CDC42BPB-202ENST00000558321 DEFB118Q96PH6 123 aa14.78□□□□□ -0.04
CDC42BPB-202ENST00000558321 SEC62Q99442 399 aaKnown RBP14.78□□□□□ -0.04
CDC42BPB-202ENST00000558321 LNPKQ9C0E8 428 aa14.78□□□□□ -0.04
CDC42BPB-202ENST00000558321 BTBD7Q9P203 1132 aa14.78□□□□□ -0.04
CDC42BPB-202ENST00000558321 STAP2Q9UGK3 403 aa14.78□□□□□ -0.04
CDC42BPB-202ENST00000558321 SPDYE16A6NNV3 312 aaPredicted RBP14.77□□□□□ -0.05
CDC42BPB-202ENST00000558321 CNMDO75829 334 aa14.77□□□□□ -0.05
CDC42BPB-202ENST00000558321 FLOT1O75955 427 aa14.77□□□□□ -0.05
CDC42BPB-202ENST00000558321 XRCC5P13010 732 aaKnown RBP14.77□□□□□ -0.05
CDC42BPB-202ENST00000558321 RGS2P41220 211 aa14.77□□□□□ -0.05
CDC42BPB-202ENST00000558321 KIAA1755Q5JYT7 1200 aa14.77□□□□□ -0.05
CDC42BPB-202ENST00000558321 ZMYM1Q5SVZ6 1142 aa14.77□□□□□ -0.05
CDC42BPB-202ENST00000558321 LBX2Q6XYB7 198 aa14.77□□□□□ -0.05
CDC42BPB-202ENST00000558321 TRMT44Q8IYL2 757 aaKnown RBP14.77□□□□□ -0.05
CDC42BPB-202ENST00000558321 EVI5LQ96CN4 794 aa14.77□□□□□ -0.05
CDC42BPB-202ENST00000558321 SHISA4Q96DD7 197 aa14.77□□□□□ -0.05
CDC42BPB-202ENST00000558321 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.77□□□□□ -0.05
CDC42BPB-202ENST00000558321 NAPBQ9H115 298 aa14.77□□□□□ -0.05
CDC42BPB-202ENST00000558321 VCPKMTQ9H867 229 aa14.77□□□□□ -0.05
CDC42BPB-202ENST00000558321 GOPCQ9HD26 462 aa14.77□□□□□ -0.05
CDC42BPB-202ENST00000558321 HMX1Q9NP08 348 aaPredicted RBP14.77□□□□□ -0.05
CDC42BPB-202ENST00000558321 SUPT16HQ9Y5B9 1047 aaKnown RBP14.77□□□□□ -0.05
CDC42BPB-202ENST00000558321 IVNS1ABPQ9Y6Y0 642 aa14.77□□□□□ -0.05
CDC42BPB-202ENST00000558321 MYH7P12883 1935 aa14.76□□□□□ -0.05
CDC42BPB-202ENST00000558321 BAZ2AQ9UIF9 1905 aaKnown RBP14.76□□□□□ -0.05
CDC42BPB-202ENST00000558321 PDE4DIPQ5VU43 2346 aa14.76□□□□□ -0.05
CDC42BPB-202ENST00000558321 RBBP6Q7Z6E9 1792 aaKnown RBP14.76□□□□□ -0.05
CDC42BPB-202ENST00000558321 SALL3Q9BXA9 1300 aa14.76□□□□□ -0.05
CDC42BPB-202ENST00000558321 SLC3A2P08195 630 aaKnown RBP14.76□□□□□ -0.05
CDC42BPB-202ENST00000558321 ZKSCAN1P17029 563 aaPredicted RBP14.76□□□□□ -0.05
CDC42BPB-202ENST00000558321 RASA1P20936 1047 aa14.76□□□□□ -0.05
CDC42BPB-202ENST00000558321 PLS1Q14651 629 aa14.76□□□□□ -0.05
CDC42BPB-202ENST00000558321 DPF3Q92784 378 aa14.76□□□□□ -0.05
CDC42BPB-202ENST00000558321 EPB41L4AQ9HCS5 686 aaPredicted RBP14.76□□□□□ -0.05
CDC42BPB-202ENST00000558321 RPTORQ8N122 1335 aa14.75□□□□□ -0.05
CDC42BPB-202ENST00000558321 SLC15A5A6NIM6 579 aa14.75□□□□□ -0.05
CDC42BPB-202ENST00000558321 TRIM6-TRIM34B2RNG4 842 aa14.75□□□□□ -0.05
CDC42BPB-202ENST00000558321 WDR46O15213 610 aaKnown RBP14.75□□□□□ -0.05
CDC42BPB-202ENST00000558321 PRDM1O75626 825 aa14.75□□□□□ -0.05
CDC42BPB-202ENST00000558321 FARP2O94887 1054 aaPredicted RBP14.75□□□□□ -0.05
CDC42BPB-202ENST00000558321 CAPN2P17655 700 aa14.75□□□□□ -0.05
CDC42BPB-202ENST00000558321 DSG3P32926 999 aa14.75□□□□□ -0.05
CDC42BPB-202ENST00000558321 TRIM32Q13049 653 aa14.75□□□□□ -0.05
CDC42BPB-202ENST00000558321 MAP2K5Q13163 448 aa14.75□□□□□ -0.05
CDC42BPB-202ENST00000558321 MORN1Q5T089 497 aa14.75□□□□□ -0.05
CDC42BPB-202ENST00000558321 MB21D1Q8N884 522 aa14.75□□□□□ -0.05
CDC42BPB-202ENST00000558321 TRIB2Q92519 343 aa14.75□□□□□ -0.05
CDC42BPB-202ENST00000558321 PAK6Q9NQU5 681 aaPredicted RBP14.75□□□□□ -0.05
CDC42BPB-202ENST00000558321 CENPFP49454 3210 aa14.75□□□□□ -0.05
CDC42BPB-202ENST00000558321 IGHDP01880 384 aa14.74□□□□□ -0.05
CDC42BPB-202ENST00000558321 PTPREP23469 700 aa14.74□□□□□ -0.05
CDC42BPB-202ENST00000558321 PDE4BQ07343 736 aa14.74□□□□□ -0.05
CDC42BPB-202ENST00000558321 CCDC129Q6ZRS4 1044 aa14.74□□□□□ -0.05
CDC42BPB-202ENST00000558321 SMC5Q8IY18 1101 aa14.74□□□□□ -0.05
CDC42BPB-202ENST00000558321 USP6NLQ92738 828 aa14.74□□□□□ -0.05
CDC42BPB-202ENST00000558321 RILPL2Q969X0 211 aa14.74□□□□□ -0.05
CDC42BPB-202ENST00000558321 ATG4CQ96DT6 458 aa14.74□□□□□ -0.05
CDC42BPB-202ENST00000558321 APBA2Q99767 749 aa14.74□□□□□ -0.05
CDC42BPB-202ENST00000558321 HTATIP2Q9BUP3 242 aa14.74□□□□□ -0.05
CDC42BPB-202ENST00000558321 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.74□□□□□ -0.05
CDC42BPB-202ENST00000558321 MOV10L1Q9BXT6 1211 aaKnown RBP14.74□□□□□ -0.05
CDC42BPB-202ENST00000558321 SPATC1LQ9H0A9 340 aa14.74□□□□□ -0.05
CDC42BPB-202ENST00000558321 CLIP2Q9UDT6 1046 aa14.74□□□□□ -0.05
CDC42BPB-202ENST00000558321 PRKAR2AP13861 404 aaKnown RBP14.73□□□□□ -0.05
CDC42BPB-202ENST00000558321 CCL14Q16627 93 aa14.73□□□□□ -0.05
CDC42BPB-202ENST00000558321 FAM83BQ5T0W9 1011 aa14.73□□□□□ -0.05
CDC42BPB-202ENST00000558321 MFSD14CQ5VZR4 134 aa14.73□□□□□ -0.05
CDC42BPB-202ENST00000558321 DPP9Q86TI2 863 aa14.73□□□□□ -0.05
CDC42BPB-202ENST00000558321 CHD1LQ86WJ1 897 aa14.73□□□□□ -0.05
CDC42BPB-202ENST00000558321 NYAP2Q9P242 653 aa14.73□□□□□ -0.05
CDC42BPB-202ENST00000558321 ROBO3Q96MS0 1386 aa14.73□□□□□ -0.05
CDC42BPB-202ENST00000558321 DOCK3Q8IZD9 2030 aa14.72□□□□□ -0.05
CDC42BPB-202ENST00000558321 STRNO43815 780 aa14.72□□□□□ -0.05
CDC42BPB-202ENST00000558321 TSPY3P0CV98 308 aa14.72□□□□□ -0.05
CDC42BPB-202ENST00000558321 TSPY8P0CW00 308 aa14.72□□□□□ -0.05
CDC42BPB-202ENST00000558321 ERCC3P19447 782 aa14.72□□□□□ -0.05
CDC42BPB-202ENST00000558321 TFAP4Q01664 338 aa14.72□□□□□ -0.05
CDC42BPB-202ENST00000558321 PPARAQ07869 468 aa14.72□□□□□ -0.05
CDC42BPB-202ENST00000558321 CACNB2Q08289 660 aaPredicted RBP14.72□□□□□ -0.05
CDC42BPB-202ENST00000558321 NCAPG2Q86XI2 1143 aa14.72□□□□□ -0.05
CDC42BPB-202ENST00000558321 CRISPLD2Q9H0B8 497 aa14.72□□□□□ -0.05
CDC42BPB-202ENST00000558321 HELLSQ9NRZ9 838 aa14.72□□□□□ -0.05
CDC42BPB-202ENST00000558321 FBXO28Q9NVF7 368 aa14.72□□□□□ -0.05
CDC42BPB-202ENST00000558321 F5H6K3 240 aa14.71□□□□□ -0.05
CDC42BPB-202ENST00000558321 NUCB1Q02818 461 aa14.71□□□□□ -0.05
CDC42BPB-202ENST00000558321 KLRC3Q07444 240 aa14.71□□□□□ -0.05
CDC42BPB-202ENST00000558321 GRB14Q14449 540 aa14.71□□□□□ -0.05
CDC42BPB-202ENST00000558321 MCMDC2Q4G0Z9 681 aa14.71□□□□□ -0.05
CDC42BPB-202ENST00000558321 FAM47AQ5JRC9 791 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms