RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 PLCH2O75038 1416 aa12.96□□□□□ -0.33
CSPG4P12-201ENST00000558282 SART1O43290 800 aaKnown RBP12.96□□□□□ -0.33
CSPG4P12-201ENST00000558282 TYW1BQ6NUM6 668 aa12.96□□□□□ -0.33
CSPG4P12-201ENST00000558282 VPS37BQ9H9H4 285 aa12.96□□□□□ -0.33
CSPG4P12-201ENST00000558282 ADGRL1O94910 1474 aa12.96□□□□□ -0.33
CSPG4P12-201ENST00000558282 GOLGA8QA0A0J9YX86 632 aa12.96□□□□□ -0.34
CSPG4P12-201ENST00000558282 GOLGA8OA6NCC3 632 aa12.96□□□□□ -0.34
CSPG4P12-201ENST00000558282 GOLGA8NF8WBI6 632 aa12.96□□□□□ -0.34
CSPG4P12-201ENST00000558282 KCNK3O14649 394 aa12.96□□□□□ -0.34
CSPG4P12-201ENST00000558282 GNA14O95837 355 aa12.96□□□□□ -0.34
CSPG4P12-201ENST00000558282 LMNB2Q03252 620 aa12.96□□□□□ -0.34
CSPG4P12-201ENST00000558282 MUM1L1Q5H9M0 696 aa12.96□□□□□ -0.34
CSPG4P12-201ENST00000558282 SPATA1Q5VX52 437 aa12.96□□□□□ -0.34
CSPG4P12-201ENST00000558282 NUDT16Q96DE0 195 aaKnown RBP12.96□□□□□ -0.34
CSPG4P12-201ENST00000558282 KIF24Q5T7B8 1368 aa12.96□□□□□ -0.34
CSPG4P12-201ENST00000558282 TBC1D8O95759 1140 aa12.95□□□□□ -0.34
CSPG4P12-201ENST00000558282 ZSCAN20P17040 1043 aaPredicted RBP12.95□□□□□ -0.34
CSPG4P12-201ENST00000558282 DCAF17Q5H9S7 520 aaPredicted RBP12.95□□□□□ -0.34
CSPG4P12-201ENST00000558282 RBM26Q5T8P6 1007 aaKnown RBP12.95□□□□□ -0.34
CSPG4P12-201ENST00000558282 TXNDC2Q86VQ3 553 aa12.95□□□□□ -0.34
CSPG4P12-201ENST00000558282 ANKRD35Q8N283 1001 aa12.95□□□□□ -0.34
CSPG4P12-201ENST00000558282 LRRC43Q8N309 656 aa12.95□□□□□ -0.34
CSPG4P12-201ENST00000558282 DAAM1Q9Y4D1 1078 aa12.95□□□□□ -0.34
CSPG4P12-201ENST00000558282 H7C1D1 291 aa12.95□□□□□ -0.34
CSPG4P12-201ENST00000558282 CALUO43852 315 aaPredicted RBP12.95□□□□□ -0.34
CSPG4P12-201ENST00000558282 CPA1P15085 419 aa12.95□□□□□ -0.34
CSPG4P12-201ENST00000558282 KMT5BQ4FZB7 885 aa12.95□□□□□ -0.34
CSPG4P12-201ENST00000558282 LDHAL6AQ6ZMR3 332 aa12.95□□□□□ -0.34
CSPG4P12-201ENST00000558282 C2CD5Q86YS7 1000 aa12.95□□□□□ -0.34
CSPG4P12-201ENST00000558282 EMILIN1Q9Y6C2 1016 aa12.95□□□□□ -0.34
CSPG4P12-201ENST00000558282 APLFQ8IW19 511 aaPredicted RBP12.95□□□□□ -0.34
CSPG4P12-201ENST00000558282 STAMBPL1Q96FJ0 436 aa12.95□□□□□ -0.34
CSPG4P12-201ENST00000558282 KLC4Q9NSK0 619 aa12.95□□□□□ -0.34
CSPG4P12-201ENST00000558282 TMOD2Q9NZR1 351 aa12.95□□□□□ -0.34
CSPG4P12-201ENST00000558282 AGTPBP1Q9UPW5 1226 aa12.95□□□□□ -0.34
CSPG4P12-201ENST00000558282 GRM8O00222 908 aa12.95□□□□□ -0.34
CSPG4P12-201ENST00000558282 RWDD2BP57060 319 aa12.95□□□□□ -0.34
CSPG4P12-201ENST00000558282 CUL3Q13618 768 aa12.95□□□□□ -0.34
CSPG4P12-201ENST00000558282 NRBF2Q96F24 287 aa12.95□□□□□ -0.34
CSPG4P12-201ENST00000558282 VAT1LQ9HCJ6 419 aa12.95□□□□□ -0.34
CSPG4P12-201ENST00000558282 POGZQ7Z3K3 1410 aa12.95□□□□□ -0.34
CSPG4P12-201ENST00000558282 ARHGAP10A1A4S6 786 aa12.94□□□□□ -0.34
CSPG4P12-201ENST00000558282 KCNJ18B7U540 433 aa12.94□□□□□ -0.34
CSPG4P12-201ENST00000558282 APOEP02649 317 aa12.94□□□□□ -0.34
CSPG4P12-201ENST00000558282 PFKFB1P16118 471 aa12.94□□□□□ -0.34
CSPG4P12-201ENST00000558282 MX2P20592 715 aa12.94□□□□□ -0.34
CSPG4P12-201ENST00000558282 VPS41P49754 854 aa12.94□□□□□ -0.34
CSPG4P12-201ENST00000558282 KCNJ12Q14500 433 aa12.94□□□□□ -0.34
CSPG4P12-201ENST00000558282 GNPTABQ3T906 1256 aa12.94□□□□□ -0.34
CSPG4P12-201ENST00000558282 AFAP1Q8N556 730 aa12.94□□□□□ -0.34
CSPG4P12-201ENST00000558282 PLEKHA4Q9H4M7 779 aa12.94□□□□□ -0.34
CSPG4P12-201ENST00000558282 MYSM1Q5VVJ2 828 aa12.94□□□□□ -0.34
CSPG4P12-201ENST00000558282 RRAGAQ7L523 313 aa12.94□□□□□ -0.34
CSPG4P12-201ENST00000558282 C8orf58Q8NAV2 365 aa12.94□□□□□ -0.34
CSPG4P12-201ENST00000558282 MRRFQ96E11 262 aaKnown RBP12.94□□□□□ -0.34
CSPG4P12-201ENST00000558282 NBPF3Q9H094 633 aa12.94□□□□□ -0.34
CSPG4P12-201ENST00000558282 RIC8AQ9NPQ8 531 aa12.94□□□□□ -0.34
CSPG4P12-201ENST00000558282 ATP10BO94823 1461 aa12.94□□□□□ -0.34
CSPG4P12-201ENST00000558282 GCFC2P16383 781 aaKnown RBP12.94□□□□□ -0.34
CSPG4P12-201ENST00000558282 ATF3P18847 181 aa12.94□□□□□ -0.34
CSPG4P12-201ENST00000558282 FAM133BQ5BKY9 247 aaKnown RBP12.94□□□□□ -0.34
CSPG4P12-201ENST00000558282 UBE3BQ7Z3V4 1068 aa12.94□□□□□ -0.34
CSPG4P12-201ENST00000558282 TTC6Q86TZ1 520 aa12.94□□□□□ -0.34
CSPG4P12-201ENST00000558282 FGD4Q96M96 766 aa12.94□□□□□ -0.34
CSPG4P12-201ENST00000558282 CRCPO75575 148 aa12.94□□□□□ -0.34
CSPG4P12-201ENST00000558282 HNRNPCP07910 306 aaKnown RBP eCLIP12.94□□□□□ -0.34
CSPG4P12-201ENST00000558282 ZNF449Q6P9G9 518 aa12.94□□□□□ -0.34
CSPG4P12-201ENST00000558282 SARM1Q6SZW1 724 aa12.94□□□□□ -0.34
CSPG4P12-201ENST00000558282 TBC1D1Q86TI0 1168 aaPredicted RBP12.94□□□□□ -0.34
CSPG4P12-201ENST00000558282 EFHD1Q9BUP0 239 aa12.94□□□□□ -0.34
CSPG4P12-201ENST00000558282 EPS15L1Q9UBC2 864 aa12.94□□□□□ -0.34
CSPG4P12-201ENST00000558282 SLC4A4Q9Y6R1 1079 aa12.94□□□□□ -0.34
CSPG4P12-201ENST00000558282 SBNO1A3KN83 1393 aa12.93□□□□□ -0.34
CSPG4P12-201ENST00000558282 THAP12O43422 761 aa12.93□□□□□ -0.34
CSPG4P12-201ENST00000558282 HEXIM1O94992 359 aaKnown RBP12.93□□□□□ -0.34
CSPG4P12-201ENST00000558282 FAM69CQ0P6D2 419 aa12.93□□□□□ -0.34
CSPG4P12-201ENST00000558282 DIS3L2Q8IYB7 885 aaKnown RBP12.93□□□□□ -0.34
CSPG4P12-201ENST00000558282 TRMT44Q8IYL2 757 aaKnown RBP12.93□□□□□ -0.34
CSPG4P12-201ENST00000558282 FANCLQ9NW38 375 aa12.93□□□□□ -0.34
CSPG4P12-201ENST00000558282 PSD3Q9NYI0 1048 aa12.93□□□□□ -0.34
CSPG4P12-201ENST00000558282 ZNF652Q9Y2D9 606 aa12.93□□□□□ -0.34
CSPG4P12-201ENST00000558282 PASKQ96RG2 1323 aa12.93□□□□□ -0.34
CSPG4P12-201ENST00000558282 PPP1R12AO14974 1030 aaPredicted RBP12.93□□□□□ -0.34
CSPG4P12-201ENST00000558282 MAN1A1P33908 653 aa12.93□□□□□ -0.34
CSPG4P12-201ENST00000558282 STRN3Q13033 797 aa12.93□□□□□ -0.34
CSPG4P12-201ENST00000558282 RETREG2Q8NC44 543 aa12.93□□□□□ -0.34
CSPG4P12-201ENST00000558282 STK24Q9Y6E0 443 aa12.93□□□□□ -0.34
CSPG4P12-201ENST00000558282 MAN1A2O60476 641 aa12.93□□□□□ -0.34
CSPG4P12-201ENST00000558282 RBM5P52756 815 aaKnown RBP eCLIP12.93□□□□□ -0.34
CSPG4P12-201ENST00000558282 ZNF174Q15697 407 aa12.93□□□□□ -0.34
CSPG4P12-201ENST00000558282 GEN1Q17RS7 908 aa12.93□□□□□ -0.34
CSPG4P12-201ENST00000558282 GLE1Q53GS7 698 aaKnown RBP12.93□□□□□ -0.34
CSPG4P12-201ENST00000558282 SDCCAG3Q96C92 435 aa12.93□□□□□ -0.34
CSPG4P12-201ENST00000558282 BIRC3Q13489 604 aa12.93□□□□□ -0.34
CSPG4P12-201ENST00000558282 PNOCQ13519 176 aa12.93□□□□□ -0.34
CSPG4P12-201ENST00000558282 CEP70Q8NHQ1 597 aa12.93□□□□□ -0.34
CSPG4P12-201ENST00000558282 PACSIN2Q9UNF0 486 aaPredicted RBP12.93□□□□□ -0.34
CSPG4P12-201ENST00000558282 TMTC3Q6ZXV5 915 aa12.92□□□□□ -0.34
CSPG4P12-201ENST00000558282 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.92□□□□□ -0.34
CSPG4P12-201ENST00000558282 IFNAR2P48551 515 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms