RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 CIZ1Q9ULV3 898 aaPredicted RBP6.37□□□□□ -1.39
SPG11-208ENST00000558155 MYO9BQ13459 2157 aa6.37□□□□□ -1.39
SPG11-208ENST00000558155 TRIM43BA6NCK2 446 aa6.36□□□□□ -1.39
SPG11-208ENST00000558155 SEPT4O43236 478 aa6.36□□□□□ -1.39
SPG11-208ENST00000558155 IGSF3O75054 1194 aa6.36□□□□□ -1.39
SPG11-208ENST00000558155 CNMDO75829 334 aa6.36□□□□□ -1.39
SPG11-208ENST00000558155 RAG1P15918 1043 aa6.36□□□□□ -1.39
SPG11-208ENST00000558155 ADCYAP1R1P41586 468 aa6.36□□□□□ -1.39
SPG11-208ENST00000558155 JAG1P78504 1218 aa6.36□□□□□ -1.39
SPG11-208ENST00000558155 TLE2Q04725 743 aa6.36□□□□□ -1.39
SPG11-208ENST00000558155 TFCP2Q12800 502 aa6.36□□□□□ -1.39
SPG11-208ENST00000558155 GRB14Q14449 540 aa6.36□□□□□ -1.39
SPG11-208ENST00000558155 GRIN2CQ14957 1233 aa6.36□□□□□ -1.39
SPG11-208ENST00000558155 TRIM60Q495X7 471 aa6.36□□□□□ -1.39
SPG11-208ENST00000558155 OLFML2BQ68BL8 750 aa6.36□□□□□ -1.39
SPG11-208ENST00000558155 NAA16Q6N069 864 aaPredicted RBP6.36□□□□□ -1.39
SPG11-208ENST00000558155 POTEEQ6S8J3 1075 aa6.36□□□□□ -1.39
SPG11-208ENST00000558155 LBX2Q6XYB7 198 aa6.36□□□□□ -1.39
SPG11-208ENST00000558155 SH3RF1Q7Z6J0 888 aa6.36□□□□□ -1.39
SPG11-208ENST00000558155 MAPKAPK5Q8IW41 473 aa6.36□□□□□ -1.39
SPG11-208ENST00000558155 TRPV1Q8NER1 839 aa6.36□□□□□ -1.39
SPG11-208ENST00000558155 ATXN2LQ8WWM7 1075 aaKnown RBP6.36□□□□□ -1.39
SPG11-208ENST00000558155 SPOCK2Q92563 424 aa6.36□□□□□ -1.39
SPG11-208ENST00000558155 TRIM43Q96BQ3 446 aaPredicted RBP6.36□□□□□ -1.39
SPG11-208ENST00000558155 C12orf42Q96LP6 360 aa6.36□□□□□ -1.39
SPG11-208ENST00000558155 GAS2L1Q99501 681 aaPredicted RBP6.36□□□□□ -1.39
SPG11-208ENST00000558155 FEZ1Q99689 392 aa6.36□□□□□ -1.39
SPG11-208ENST00000558155 ZNF576Q9H609 170 aa6.36□□□□□ -1.39
SPG11-208ENST00000558155 CABP5Q9NP86 173 aa6.36□□□□□ -1.39
SPG11-208ENST00000558155 PDLIM7Q9NR12 457 aa6.36□□□□□ -1.39
SPG11-208ENST00000558155 AATFQ9NY61 560 aaKnown RBP eCLIP6.36□□□□□ -1.39
SPG11-208ENST00000558155 PALD1Q9ULE6 856 aa6.36□□□□□ -1.39
SPG11-208ENST00000558155 RLFQ13129 1914 aa6.36□□□□□ -1.39
SPG11-208ENST00000558155 COL6A3P12111 3177 aa6.36□□□□□ -1.39
SPG11-208ENST00000558155 FRMPD3Q5JV73 1810 aa6.35□□□□□ -1.39
SPG11-208ENST00000558155 KIAA0355O15063 1070 aa6.35□□□□□ -1.39
SPG11-208ENST00000558155 SRGAP3O43295 1099 aa6.35□□□□□ -1.39
SPG11-208ENST00000558155 GH2P01242 217 aa6.35□□□□□ -1.39
SPG11-208ENST00000558155 CLTBP09497 229 aa6.35□□□□□ -1.39
SPG11-208ENST00000558155 CYBAP13498 195 aa6.35□□□□□ -1.39
SPG11-208ENST00000558155 ARID4AP29374 1257 aaPredicted RBP6.35□□□□□ -1.39
SPG11-208ENST00000558155 MRPS5P82675 430 aaKnown RBP6.35□□□□□ -1.39
SPG11-208ENST00000558155 FPGSQ05932 587 aa6.35□□□□□ -1.39
SPG11-208ENST00000558155 G3BP1Q13283 466 aaKnown RBP eCLIP6.35□□□□□ -1.39
SPG11-208ENST00000558155 COG2Q14746 738 aa6.35□□□□□ -1.39
SPG11-208ENST00000558155 RAB3GAP1Q15042 981 aa6.35□□□□□ -1.39
SPG11-208ENST00000558155 LRRC41Q15345 812 aa6.35□□□□□ -1.39
SPG11-208ENST00000558155 ZYXQ15942 572 aaKnown RBP6.35□□□□□ -1.39
SPG11-208ENST00000558155 ALDH1L2Q3SY69 923 aa6.35□□□□□ -1.39
SPG11-208ENST00000558155 CERKLQ49MI3 558 aaPredicted RBP6.35□□□□□ -1.39
SPG11-208ENST00000558155 ANO1Q5XXA6 986 aa6.35□□□□□ -1.39
SPG11-208ENST00000558155 CCDC174Q6PII3 467 aa6.35□□□□□ -1.39
SPG11-208ENST00000558155 IL27Q8NEV9 243 aa6.35□□□□□ -1.39
SPG11-208ENST00000558155 PPM1EQ8WY54 764 aa6.35□□□□□ -1.39
SPG11-208ENST00000558155 FERMT2Q96AC1 680 aa6.35□□□□□ -1.39
SPG11-208ENST00000558155 KIAA1683Q9H0B3 1180 aa6.35□□□□□ -1.39
SPG11-208ENST00000558155 BTBD7Q9P203 1132 aa6.35□□□□□ -1.39
SPG11-208ENST00000558155 SMCHD1A6NHR9 2005 aa6.35□□□□□ -1.39
SPG11-208ENST00000558155 MAST2Q6P0Q8 1798 aa6.34□□□□□ -1.39
SPG11-208ENST00000558155 FLT1P17948 1338 aa6.34□□□□□ -1.39
SPG11-208ENST00000558155 DCDC2CA8MYV0 355 aa6.34□□□□□ -1.39
SPG11-208ENST00000558155 E9PSI1 815 aa6.34□□□□□ -1.39
SPG11-208ENST00000558155 ANP32CO43423 234 aa6.34□□□□□ -1.39
SPG11-208ENST00000558155 IGHA2P01877 340 aa6.34□□□□□ -1.39
SPG11-208ENST00000558155 GNAI3P08754 354 aa6.34□□□□□ -1.39
SPG11-208ENST00000558155 RARBP10826 455 aa6.34□□□□□ -1.39
SPG11-208ENST00000558155 DNAJB2P25686 324 aa6.34□□□□□ -1.39
SPG11-208ENST00000558155 ADORA2AP29274 412 aa6.34□□□□□ -1.39
SPG11-208ENST00000558155 PLA2G5P39877 138 aa6.34□□□□□ -1.39
SPG11-208ENST00000558155 MCAMP43121 646 aa6.34□□□□□ -1.39
SPG11-208ENST00000558155 ABCB5Q2M3G0 1257 aa6.34□□□□□ -1.39
SPG11-208ENST00000558155 SHROOM1Q2M3G4 852 aaPredicted RBP6.34□□□□□ -1.39
SPG11-208ENST00000558155 CCDC158Q5M9N0 1113 aa6.34□□□□□ -1.39
SPG11-208ENST00000558155 PRAMEF19Q5SWL8 479 aa6.34□□□□□ -1.39
SPG11-208ENST00000558155 AKNAD1Q5T1N1 836 aa6.34□□□□□ -1.39
SPG11-208ENST00000558155 TATDN1Q6P1N9 297 aa6.34□□□□□ -1.39
SPG11-208ENST00000558155 PI16Q6UXB8 463 aa6.34□□□□□ -1.39
SPG11-208ENST00000558155 CCDC129Q6ZRS4 1044 aa6.34□□□□□ -1.39
SPG11-208ENST00000558155 RNF180Q86T96 592 aa6.34□□□□□ -1.39
SPG11-208ENST00000558155 TTC6Q86TZ1 520 aa6.34□□□□□ -1.39
SPG11-208ENST00000558155 CERS3Q8IU89 383 aa6.34□□□□□ -1.39
SPG11-208ENST00000558155 FAM9BQ8IZU0 186 aa6.34□□□□□ -1.39
SPG11-208ENST00000558155 SHCBP1Q8NEM2 672 aa6.34□□□□□ -1.39
SPG11-208ENST00000558155 TIFAQ96CG3 184 aa6.34□□□□□ -1.39
SPG11-208ENST00000558155 TOX2Q96NM4 488 aa6.34□□□□□ -1.39
SPG11-208ENST00000558155 ASB2Q96Q27 587 aa6.34□□□□□ -1.39
SPG11-208ENST00000558155 MOV10L1Q9BXT6 1211 aaKnown RBP6.34□□□□□ -1.39
SPG11-208ENST00000558155 API5Q9BZZ5 524 aaKnown RBP6.34□□□□□ -1.39
SPG11-208ENST00000558155 MROH8Q9H579 483 aa6.34□□□□□ -1.39
SPG11-208ENST00000558155 RPAP3Q9H6T3 665 aaPredicted RBP6.34□□□□□ -1.39
SPG11-208ENST00000558155 DNAJC18Q9H819 358 aa6.34□□□□□ -1.39
SPG11-208ENST00000558155 TMEM39AQ9NV64 488 aa6.34□□□□□ -1.39
SPG11-208ENST00000558155 SAP30BPQ9UHR5 308 aaKnown RBP6.34□□□□□ -1.39
SPG11-208ENST00000558155 NRBP1Q9UHY1 535 aa6.34□□□□□ -1.39
SPG11-208ENST00000558155 PHF24Q9UPV7 400 aa6.34□□□□□ -1.39
SPG11-208ENST00000558155 LTBP2Q14767 1821 aa6.34□□□□□ -1.4
SPG11-208ENST00000558155 ZNFX1Q9P2E3 1918 aaKnown RBP6.33□□□□□ -1.4
SPG11-208ENST00000558155 SPDYE16A6NNV3 312 aaPredicted RBP6.33□□□□□ -1.4
SPG11-208ENST00000558155 PQBP1O60828 265 aaKnown RBP6.33□□□□□ -1.4
SPG11-208ENST00000558155 COBLO75128 1261 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms