RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 ZNF274Q96GC6 653 aaPredicted RBP8.68□□□□□ -1.02
SPG11-204ENST00000557866 GBP4Q96PP9 640 aa8.68□□□□□ -1.02
SPG11-204ENST00000557866 COA1Q9GZY4 146 aa8.68□□□□□ -1.02
SPG11-204ENST00000557866 ANAPC4Q9UJX5 808 aa8.68□□□□□ -1.02
SPG11-204ENST00000557866 MTMR6Q9Y217 621 aa8.68□□□□□ -1.02
SPG11-204ENST00000557866 LTBP1Q14766 1721 aa8.68□□□□□ -1.02
SPG11-204ENST00000557866 LRRC37AA6NMS7 1700 aa8.67□□□□□ -1.02
SPG11-204ENST00000557866 STX6O43752 255 aa8.67□□□□□ -1.02
SPG11-204ENST00000557866 CYP2D6P10635 497 aa8.67□□□□□ -1.02
SPG11-204ENST00000557866 COL11A2P13942 1736 aaPredicted RBP8.67□□□□□ -1.02
SPG11-204ENST00000557866 SNRPBP14678 240 aaKnown RBP8.67□□□□□ -1.02
SPG11-204ENST00000557866 CCT2P78371 535 aaKnown RBP8.67□□□□□ -1.02
SPG11-204ENST00000557866 FGD1P98174 961 aa8.67□□□□□ -1.02
SPG11-204ENST00000557866 NR5A1Q13285 461 aa8.67□□□□□ -1.02
SPG11-204ENST00000557866 C4orf48Q5BLP8 95 aa8.67□□□□□ -1.02
SPG11-204ENST00000557866 CTR9Q6PD62 1173 aa8.67□□□□□ -1.02
SPG11-204ENST00000557866 C10orf71Q711Q0 1435 aa8.67□□□□□ -1.02
SPG11-204ENST00000557866 NSUN7Q8NE18 718 aaKnown RBP8.67□□□□□ -1.02
SPG11-204ENST00000557866 SH3RF3Q8TEJ3 882 aaPredicted RBP8.67□□□□□ -1.02
SPG11-204ENST00000557866 SNED1Q8TER0 1413 aa8.67□□□□□ -1.02
SPG11-204ENST00000557866 CNKSR1Q969H4 720 aa8.67□□□□□ -1.02
SPG11-204ENST00000557866 MXD3Q9BW11 206 aa8.67□□□□□ -1.02
SPG11-204ENST00000557866 RTFDC1Q9BY42 306 aaPredicted RBP8.67□□□□□ -1.02
SPG11-204ENST00000557866 NCOA5Q9HCD5 579 aaKnown RBP8.67□□□□□ -1.02
SPG11-204ENST00000557866 DCP1AQ9NPI6 582 aaPredicted RBP8.67□□□□□ -1.02
SPG11-204ENST00000557866 ZSWIM5Q9P217 1185 aa8.67□□□□□ -1.02
SPG11-204ENST00000557866 MKRN1Q9UHC7 482 aaKnown RBP8.67□□□□□ -1.02
SPG11-204ENST00000557866 MYH7P12883 1935 aa8.66□□□□□ -1.02
SPG11-204ENST00000557866 MROH7-TTC4A0A0A0MT08 1334 aa8.66□□□□□ -1.02
SPG11-204ENST00000557866 WDR33Q9C0J8 1336 aaKnown RBP8.66□□□□□ -1.02
SPG11-204ENST00000557866 KLF18A0A0U1RQI7 1052 aa8.66□□□□□ -1.02
SPG11-204ENST00000557866 MINDY4BA8MYZ0 360 aa8.66□□□□□ -1.02
SPG11-204ENST00000557866 USP17L12C9JPN9 530 aa8.66□□□□□ -1.02
SPG11-204ENST00000557866 USP17L21D6R901 530 aa8.66□□□□□ -1.02
SPG11-204ENST00000557866 FGRP09769 529 aa8.66□□□□□ -1.02
SPG11-204ENST00000557866 ZSCAN22P10073 491 aaPredicted RBP8.66□□□□□ -1.02
SPG11-204ENST00000557866 KCNA3P22001 575 aa8.66□□□□□ -1.02
SPG11-204ENST00000557866 GTF2IP78347 998 aa8.66□□□□□ -1.02
SPG11-204ENST00000557866 GSTO1P78417 241 aa8.66□□□□□ -1.02
SPG11-204ENST00000557866 TRDNQ13061 729 aa8.66□□□□□ -1.02
SPG11-204ENST00000557866 MFSD14BQ5SR56 506 aa8.66□□□□□ -1.02
SPG11-204ENST00000557866 MCTP1Q6DN14 999 aa8.66□□□□□ -1.02
SPG11-204ENST00000557866 MFSD6Q6ZSS7 791 aa8.66□□□□□ -1.02
SPG11-204ENST00000557866 SH3RF1Q7Z6J0 888 aa8.66□□□□□ -1.02
SPG11-204ENST00000557866 RAB11FIP4Q86YS3 637 aa8.66□□□□□ -1.02
SPG11-204ENST00000557866 STK11IPQ8N1F8 1099 aa8.66□□□□□ -1.02
SPG11-204ENST00000557866 CERS5Q8N5B7 392 aa8.66□□□□□ -1.02
SPG11-204ENST00000557866 SLC16A10Q8TF71 515 aa8.66□□□□□ -1.02
SPG11-204ENST00000557866 LLPHQ9BRT6 129 aaKnown RBP8.66□□□□□ -1.02
SPG11-204ENST00000557866 CRNKL1Q9BZJ0 848 aaKnown RBP8.66□□□□□ -1.02
SPG11-204ENST00000557866 ZC3H12CQ9C0D7 883 aaKnown RBP8.66□□□□□ -1.02
SPG11-204ENST00000557866 LY9Q9HBG7 655 aa8.66□□□□□ -1.02
SPG11-204ENST00000557866 ATP8A2Q9NTI2 1148 aa8.66□□□□□ -1.02
SPG11-204ENST00000557866 LMBRD1Q9NUN5 540 aa8.66□□□□□ -1.02
SPG11-204ENST00000557866 ANGEL1Q9UNK9 670 aaKnown RBP8.66□□□□□ -1.02
SPG11-204ENST00000557866 GAKO14976 1311 aa8.65□□□□□ -1.02
SPG11-204ENST00000557866 GPR75-ASB3A0A0A6YYF3 556 aa8.65□□□□□ -1.02
SPG11-204ENST00000557866 TRAK2O60296 914 aa8.65□□□□□ -1.02
SPG11-204ENST00000557866 LDHCP07864 332 aa8.65□□□□□ -1.02
SPG11-204ENST00000557866 USP17L8P0C7I0 530 aa8.65□□□□□ -1.02
SPG11-204ENST00000557866 DPEP1P16444 411 aa8.65□□□□□ -1.02
SPG11-204ENST00000557866 WDR4P57081 412 aaKnown RBP8.65□□□□□ -1.02
SPG11-204ENST00000557866 RHBDL3P58872 404 aa8.65□□□□□ -1.02
SPG11-204ENST00000557866 SBK1Q52WX2 424 aa8.65□□□□□ -1.02
SPG11-204ENST00000557866 RRP12Q5JTH9 1297 aaKnown RBP8.65□□□□□ -1.02
SPG11-204ENST00000557866 LARP1BQ659C4 914 aaKnown RBP8.65□□□□□ -1.02
SPG11-204ENST00000557866 SH3BP5LQ7L8J4 393 aa8.65□□□□□ -1.02
SPG11-204ENST00000557866 TRIM46Q7Z4K8 759 aa8.65□□□□□ -1.02
SPG11-204ENST00000557866 SGMS1Q86VZ5 419 aa8.65□□□□□ -1.02
SPG11-204ENST00000557866 CCDC125Q86Z20 511 aa8.65□□□□□ -1.02
SPG11-204ENST00000557866 TBC1D22AQ8WUA7 517 aa8.65□□□□□ -1.02
SPG11-204ENST00000557866 DDX11Q96FC9 970 aa8.65□□□□□ -1.02
SPG11-204ENST00000557866 TMEM87BQ96K49 555 aa8.65□□□□□ -1.02
SPG11-204ENST00000557866 EYA3Q99504 573 aa8.65□□□□□ -1.02
SPG11-204ENST00000557866 KRT23Q9C075 422 aa8.65□□□□□ -1.02
SPG11-204ENST00000557866 RNF41Q9H4P4 317 aaPredicted RBP8.65□□□□□ -1.02
SPG11-204ENST00000557866 CNNM2Q9H8M5 875 aa8.65□□□□□ -1.02
SPG11-204ENST00000557866 KCNQ5Q9NR82 932 aa8.65□□□□□ -1.02
SPG11-204ENST00000557866 NAP1L2Q9ULW6 460 aaPredicted RBP8.65□□□□□ -1.02
SPG11-204ENST00000557866 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.65□□□□□ -1.02
SPG11-204ENST00000557866 QSER1Q2KHR3 1735 aa8.64□□□□□ -1.03
SPG11-204ENST00000557866 TIAM2Q8IVF5 1701 aa8.64□□□□□ -1.03
SPG11-204ENST00000557866 PTPDC1A2A3K4 754 aa8.64□□□□□ -1.03
SPG11-204ENST00000557866 GOLGA8BA8MQT2 603 aa8.64□□□□□ -1.03
SPG11-204ENST00000557866 IFIT3O14879 490 aaKnown RBP8.64□□□□□ -1.03
SPG11-204ENST00000557866 PPFIA3O75145 1194 aa8.64□□□□□ -1.03
SPG11-204ENST00000557866 ZBTB7AO95365 584 aa8.64□□□□□ -1.03
SPG11-204ENST00000557866 F13A1P00488 732 aa8.64□□□□□ -1.03
SPG11-204ENST00000557866 FDPSP14324 419 aaKnown RBP8.64□□□□□ -1.03
SPG11-204ENST00000557866 GRM5P41594 1212 aa8.64□□□□□ -1.03
SPG11-204ENST00000557866 LIFRP42702 1097 aa8.64□□□□□ -1.03
SPG11-204ENST00000557866 BTDP43251 543 aa8.64□□□□□ -1.03
SPG11-204ENST00000557866 FOXD4L6Q3SYB3 417 aaPredicted RBP8.64□□□□□ -1.03
SPG11-204ENST00000557866 TMEM67Q5HYA8 995 aa8.64□□□□□ -1.03
SPG11-204ENST00000557866 FOXD4L3Q6VB84 417 aaPredicted RBP8.64□□□□□ -1.03
SPG11-204ENST00000557866 CDC37L1Q7L3B6 337 aa8.64□□□□□ -1.03
SPG11-204ENST00000557866 ZKSCAN3Q9BRR0 538 aa8.64□□□□□ -1.03
SPG11-204ENST00000557866 C1QTNF2Q9BXJ5 285 aa8.64□□□□□ -1.03
SPG11-204ENST00000557866 TMX4Q9H1E5 349 aaPredicted RBP8.64□□□□□ -1.03
SPG11-204ENST00000557866 DBNDD1Q9H9R9 158 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms