RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 DCAF15Q66K64 600 aa16.82■□□□□ 0.28
ARHGEF40-208ENST00000557498 USP50Q70EL3 339 aaPredicted RBP16.82■□□□□ 0.28
ARHGEF40-208ENST00000557498 CDC37L1Q7L3B6 337 aa16.82■□□□□ 0.28
ARHGEF40-208ENST00000557498 CMTR1Q8N1G2 835 aaKnown RBP16.82■□□□□ 0.28
ARHGEF40-208ENST00000557498 MKL1Q969V6 931 aa16.82■□□□□ 0.28
ARHGEF40-208ENST00000557498 HOOK2Q96ED9 719 aa16.82■□□□□ 0.28
ARHGEF40-208ENST00000557498 ALG1Q9BT22 464 aa16.82■□□□□ 0.28
ARHGEF40-208ENST00000557498 MAD2L2Q9UI95 211 aa16.82■□□□□ 0.28
ARHGEF40-208ENST00000557498 PALM3A6NDB9 673 aaPredicted RBP16.81■□□□□ 0.28
ARHGEF40-208ENST00000557498 H3BQV1 296 aa16.81■□□□□ 0.28
ARHGEF40-208ENST00000557498 FOSBP53539 338 aa16.81■□□□□ 0.28
ARHGEF40-208ENST00000557498 ATP2B2Q01814 1243 aa16.81■□□□□ 0.28
ARHGEF40-208ENST00000557498 IFFO2Q5TF58 517 aa16.81■□□□□ 0.28
ARHGEF40-208ENST00000557498 CLEC17AQ6ZS10 378 aa16.81■□□□□ 0.28
ARHGEF40-208ENST00000557498 SRBD1Q8N5C6 995 aaKnown RBP16.81■□□□□ 0.28
ARHGEF40-208ENST00000557498 RGS22Q8NE09 1264 aa16.81■□□□□ 0.28
ARHGEF40-208ENST00000557498 WASF1Q92558 559 aa16.81■□□□□ 0.28
ARHGEF40-208ENST00000557498 C8orf76Q96K31 380 aa16.81■□□□□ 0.28
ARHGEF40-208ENST00000557498 GBP4Q96PP9 640 aa16.81■□□□□ 0.28
ARHGEF40-208ENST00000557498 MTMR7Q9Y216 660 aa16.81■□□□□ 0.28
ARHGEF40-208ENST00000557498 DOCK1Q14185 1865 aa16.8■□□□□ 0.28
ARHGEF40-208ENST00000557498 IQCA1LA6NCM1 817 aa16.8■□□□□ 0.28
ARHGEF40-208ENST00000557498 PHF20L1A8MW92 1017 aa16.8■□□□□ 0.28
ARHGEF40-208ENST00000557498 PRPF3O43395 683 aaKnown RBP16.8■□□□□ 0.28
ARHGEF40-208ENST00000557498 DEXIO95424 95 aa16.8■□□□□ 0.28
ARHGEF40-208ENST00000557498 PARP1P09874 1014 aaKnown RBP16.8■□□□□ 0.28
ARHGEF40-208ENST00000557498 SNHG28P0DPA3 235 aa16.8■□□□□ 0.28
ARHGEF40-208ENST00000557498 PDHBP11177 359 aa16.8■□□□□ 0.28
ARHGEF40-208ENST00000557498 CAP2P40123 477 aa16.8■□□□□ 0.28
ARHGEF40-208ENST00000557498 AKAP17AQ02040 695 aaKnown RBP16.8■□□□□ 0.28
ARHGEF40-208ENST00000557498 ASPRV1Q53RT3 343 aa16.8■□□□□ 0.28
ARHGEF40-208ENST00000557498 SIAH1Q8IUQ4 282 aa16.8■□□□□ 0.28
ARHGEF40-208ENST00000557498 STAG2Q8N3U4 1231 aa16.8■□□□□ 0.28
ARHGEF40-208ENST00000557498 CCDC82Q8N4S0 544 aa16.8■□□□□ 0.28
ARHGEF40-208ENST00000557498 DCPSQ96C86 337 aaKnown RBP16.8■□□□□ 0.28
ARHGEF40-208ENST00000557498 LZTS2Q9BRK4 669 aa16.8■□□□□ 0.28
ARHGEF40-208ENST00000557498 ZNF341Q9BYN7 854 aa16.8■□□□□ 0.28
ARHGEF40-208ENST00000557498 GINM1Q9NU53 330 aa16.8■□□□□ 0.28
ARHGEF40-208ENST00000557498 SYNPO2Q9UMS6 1093 aa16.8■□□□□ 0.28
ARHGEF40-208ENST00000557498 SSC5DA1L4H1 1573 aa16.8■□□□□ 0.28
ARHGEF40-208ENST00000557498 USP17L5A8MUK1 530 aa16.79■□□□□ 0.28
ARHGEF40-208ENST00000557498 NFKBIBQ15653 356 aa16.79■□□□□ 0.28
ARHGEF40-208ENST00000557498 RASGRP2Q7LDG7 609 aa16.79■□□□□ 0.28
ARHGEF40-208ENST00000557498 AIFM3Q96NN9 605 aa16.79■□□□□ 0.28
ARHGEF40-208ENST00000557498 TAF1DQ9H5J8 278 aaPredicted RBP16.79■□□□□ 0.28
ARHGEF40-208ENST00000557498 ARHGEF10LQ9HCE6 1279 aa16.79■□□□□ 0.28
ARHGEF40-208ENST00000557498 POLR2AP24928 1970 aaKnown RBP16.78■□□□□ 0.28
ARHGEF40-208ENST00000557498 UBE2Q2LH0YL09 131 aa16.78■□□□□ 0.28
ARHGEF40-208ENST00000557498 BAG4O95429 457 aaKnown RBP16.78■□□□□ 0.28
ARHGEF40-208ENST00000557498 ASNSP08243 561 aa16.78■□□□□ 0.28
ARHGEF40-208ENST00000557498 GUCY1B3Q02153 619 aa16.78■□□□□ 0.28
ARHGEF40-208ENST00000557498 USP17L2Q6R6M4 530 aa16.78■□□□□ 0.28
ARHGEF40-208ENST00000557498 SULF1Q8IWU6 871 aa16.78■□□□□ 0.28
ARHGEF40-208ENST00000557498 FBXO18Q8NFZ0 1043 aa16.78■□□□□ 0.28
ARHGEF40-208ENST00000557498 ZC3H15Q8WU90 426 aaKnown RBP16.78■□□□□ 0.28
ARHGEF40-208ENST00000557498 RBM27Q9P2N5 1060 aaKnown RBP16.78■□□□□ 0.28
ARHGEF40-208ENST00000557498 FRMPD2Q68DX3 1309 aaPredicted RBP16.77■□□□□ 0.28
ARHGEF40-208ENST00000557498 ADM5C9JUS6 153 aa16.77■□□□□ 0.28
ARHGEF40-208ENST00000557498 KLRF2D3W0D1 207 aa16.77■□□□□ 0.28
ARHGEF40-208ENST00000557498 GOLGA8HP0CJ92 632 aa16.77■□□□□ 0.28
ARHGEF40-208ENST00000557498 SMARCA1P28370 1054 aa16.77■□□□□ 0.28
ARHGEF40-208ENST00000557498 ZNF543Q08ER8 600 aa16.77■□□□□ 0.28
ARHGEF40-208ENST00000557498 RESTQ13127 1097 aa16.77■□□□□ 0.28
ARHGEF40-208ENST00000557498 SUPT20HL1Q3ZLR7 823 aa16.77■□□□□ 0.28
ARHGEF40-208ENST00000557498 PRAMEF18Q5VWM3 479 aa16.77■□□□□ 0.28
ARHGEF40-208ENST00000557498 SLFN13Q68D06 897 aa16.77■□□□□ 0.28
ARHGEF40-208ENST00000557498 GMCL1P1Q8NEA9 526 aa16.77■□□□□ 0.28
ARHGEF40-208ENST00000557498 DCAF4Q8WV16 495 aa16.77■□□□□ 0.28
ARHGEF40-208ENST00000557498 SPZ1Q9BXG8 430 aa16.77■□□□□ 0.28
ARHGEF40-208ENST00000557498 ZNF112Q9UJU3 913 aa16.77■□□□□ 0.28
ARHGEF40-208ENST00000557498 ATP6V1DQ9Y5K8 247 aa16.77■□□□□ 0.28
ARHGEF40-208ENST00000557498 V9GY48 417 aaPredicted RBP16.77■□□□□ 0.28
ARHGEF40-208ENST00000557498 MYH15Q9Y2K3 1946 aa16.76■□□□□ 0.27
ARHGEF40-208ENST00000557498 POTECB2RU33 542 aa16.76■□□□□ 0.27
ARHGEF40-208ENST00000557498 CTNND1O60716 968 aaKnown RBP16.76■□□□□ 0.27
ARHGEF40-208ENST00000557498 MCM4P33991 863 aa16.76■□□□□ 0.27
ARHGEF40-208ENST00000557498 TRIM29Q14134 588 aa16.76■□□□□ 0.27
ARHGEF40-208ENST00000557498 PKN1Q16512 942 aa16.76■□□□□ 0.27
ARHGEF40-208ENST00000557498 CCDC96Q2M329 555 aa16.76■□□□□ 0.27
ARHGEF40-208ENST00000557498 SLC35G1Q2M3R5 365 aa16.76■□□□□ 0.27
ARHGEF40-208ENST00000557498 GPATCH4Q5T3I0 446 aaKnown RBP16.76■□□□□ 0.27
ARHGEF40-208ENST00000557498 KRT40Q6A162 431 aa16.76■□□□□ 0.27
ARHGEF40-208ENST00000557498 OTUD7BQ6GQQ9 843 aa16.76■□□□□ 0.27
ARHGEF40-208ENST00000557498 FERMT3Q86UX7 667 aa16.76■□□□□ 0.27
ARHGEF40-208ENST00000557498 ZSCAN16Q9H4T2 348 aaPredicted RBP16.76■□□□□ 0.27
ARHGEF40-208ENST00000557498 PAPPA2Q9BXP8 1791 aa16.76■□□□□ 0.27
ARHGEF40-208ENST00000557498 A0A1W2PRG0 241 aa16.75■□□□□ 0.27
ARHGEF40-208ENST00000557498 CYTH3O43739 400 aa16.75■□□□□ 0.27
ARHGEF40-208ENST00000557498 NDUFB10O96000 172 aa16.75■□□□□ 0.27
ARHGEF40-208ENST00000557498 KRT26Q7Z3Y9 468 aa16.75■□□□□ 0.27
ARHGEF40-208ENST00000557498 USP48Q86UV5 1035 aa16.75■□□□□ 0.27
ARHGEF40-208ENST00000557498 PNMA8AQ86V59 439 aaPredicted RBP16.75■□□□□ 0.27
ARHGEF40-208ENST00000557498 GPCPD1Q9NPB8 672 aa16.75■□□□□ 0.27
ARHGEF40-208ENST00000557498 GJB4Q9NTQ9 266 aa16.75■□□□□ 0.27
ARHGEF40-208ENST00000557498 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.75■□□□□ 0.27
ARHGEF40-208ENST00000557498 TMX2Q9Y320 296 aa16.75■□□□□ 0.27
ARHGEF40-208ENST00000557498 hCG_1642624A0A1W2PR95 340 aa16.74■□□□□ 0.27
ARHGEF40-208ENST00000557498 DCAF8L1A6NGE4 600 aa16.74■□□□□ 0.27
ARHGEF40-208ENST00000557498 F5H6K3 240 aa16.74■□□□□ 0.27
ARHGEF40-208ENST00000557498 SCG2P13521 617 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms