RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 WDR46O15213 610 aaKnown RBP16.39■□□□□ 0.21
VPS33B-206ENST00000557358 MAPK4P31152 587 aa16.39■□□□□ 0.21
VPS33B-206ENST00000557358 UBXN2AP68543 259 aa16.39■□□□□ 0.21
VPS33B-206ENST00000557358 COG2Q14746 738 aa16.39■□□□□ 0.21
VPS33B-206ENST00000557358 TTC22Q5TAA0 569 aa16.39■□□□□ 0.21
VPS33B-206ENST00000557358 CENPQQ7L2Z9 268 aaPredicted RBP16.39■□□□□ 0.21
VPS33B-206ENST00000557358 ARMC5Q96C12 935 aa16.39■□□□□ 0.21
VPS33B-206ENST00000557358 A0A1W2PRG0 241 aa16.38■□□□□ 0.21
VPS33B-206ENST00000557358 TSPY2A6NKD2 308 aa16.38■□□□□ 0.21
VPS33B-206ENST00000557358 PRDM1O75626 825 aa16.38■□□□□ 0.21
VPS33B-206ENST00000557358 HSPD1P10809 573 aaKnown RBP16.38■□□□□ 0.21
VPS33B-206ENST00000557358 GRK4P32298 578 aa16.38■□□□□ 0.21
VPS33B-206ENST00000557358 ERVK-9P63128 1117 aa16.38■□□□□ 0.21
VPS33B-206ENST00000557358 ERVK-24P63145 666 aa16.38■□□□□ 0.21
VPS33B-206ENST00000557358 MB21D1Q8N884 522 aa16.38■□□□□ 0.21
VPS33B-206ENST00000557358 SLAIN1Q8ND83 568 aa16.38■□□□□ 0.21
VPS33B-206ENST00000557358 RNF41Q9H4P4 317 aaPredicted RBP16.38■□□□□ 0.21
VPS33B-206ENST00000557358 NYAP2Q9P242 653 aa16.38■□□□□ 0.21
VPS33B-206ENST00000557358 CTNNA3Q9UI47 895 aa16.38■□□□□ 0.21
VPS33B-206ENST00000557358 RANBP6O60518 1105 aaKnown RBP16.37■□□□□ 0.21
VPS33B-206ENST00000557358 FLOT1O75955 427 aa16.37■□□□□ 0.21
VPS33B-206ENST00000557358 TTLL1O95922 423 aa16.37■□□□□ 0.21
VPS33B-206ENST00000557358 PCP11498 1178 aaKnown RBP16.37■□□□□ 0.21
VPS33B-206ENST00000557358 SOX10P56693 466 aa16.37■□□□□ 0.21
VPS33B-206ENST00000557358 TFAP4Q01664 338 aa16.37■□□□□ 0.21
VPS33B-206ENST00000557358 PRKCZQ05513 592 aa16.37■□□□□ 0.21
VPS33B-206ENST00000557358 WDR78Q5VTH9 848 aa16.37■□□□□ 0.21
VPS33B-206ENST00000557358 SPICE1Q8N0Z3 855 aa16.37■□□□□ 0.21
VPS33B-206ENST00000557358 SOCS4Q8WXH5 440 aa16.37■□□□□ 0.21
VPS33B-206ENST00000557358 ANAPC4Q9UJX5 808 aa16.37■□□□□ 0.21
VPS33B-206ENST00000557358 SYNPO2Q9UMS6 1093 aa16.37■□□□□ 0.21
VPS33B-206ENST00000557358 CTDP1Q9Y5B0 961 aaPredicted RBP16.37■□□□□ 0.21
VPS33B-206ENST00000557358 IVNS1ABPQ9Y6Y0 642 aa16.37■□□□□ 0.21
VPS33B-206ENST00000557358 ZMYM6O95789 1325 aa16.37■□□□□ 0.21
VPS33B-206ENST00000557358 SMIM22K7EJ46 135 aa16.36■□□□□ 0.21
VPS33B-206ENST00000557358 FGAP02671 866 aa16.36■□□□□ 0.21
VPS33B-206ENST00000557358 FLT3LGP49771 235 aa16.36■□□□□ 0.21
VPS33B-206ENST00000557358 NT5C2P49902 561 aa16.36■□□□□ 0.21
VPS33B-206ENST00000557358 VPS53Q5VIR6 699 aa16.36■□□□□ 0.21
VPS33B-206ENST00000557358 SAMD1Q6SPF0 538 aaPredicted RBP16.36■□□□□ 0.21
VPS33B-206ENST00000557358 LBX2Q6XYB7 198 aa16.36■□□□□ 0.21
VPS33B-206ENST00000557358 CLEC10AQ8IUN9 316 aa16.36■□□□□ 0.21
VPS33B-206ENST00000557358 NEDD1Q8NHV4 660 aa16.36■□□□□ 0.21
VPS33B-206ENST00000557358 NUDT12Q9BQG2 462 aa16.36■□□□□ 0.21
VPS33B-206ENST00000557358 CLIP2Q9UDT6 1046 aa16.36■□□□□ 0.21
VPS33B-206ENST00000557358 ZNF213O14771 459 aa16.35■□□□□ 0.21
VPS33B-206ENST00000557358 ADCY3O60266 1144 aa16.35■□□□□ 0.21
VPS33B-206ENST00000557358 PDE4AP27815 886 aa16.35■□□□□ 0.21
VPS33B-206ENST00000557358 MLLT1Q03111 559 aaPredicted RBP16.35■□□□□ 0.21
VPS33B-206ENST00000557358 CTDSPL2Q05D32 466 aa16.35■□□□□ 0.21
VPS33B-206ENST00000557358 IRF5Q13568 498 aa16.35■□□□□ 0.21
VPS33B-206ENST00000557358 MFSD6Q6ZSS7 791 aa16.35■□□□□ 0.21
VPS33B-206ENST00000557358 ZNF589Q86UQ0 364 aaPredicted RBP16.35■□□□□ 0.21
VPS33B-206ENST00000557358 CCDC136Q96JN2 1154 aa16.35■□□□□ 0.21
VPS33B-206ENST00000557358 MTMR4Q9NYA4 1195 aa16.35■□□□□ 0.21
VPS33B-206ENST00000557358 RBPJLQ9UBG7 517 aa16.35■□□□□ 0.21
VPS33B-206ENST00000557358 ISY1Q9ULR0 285 aaKnown RBP16.35■□□□□ 0.21
VPS33B-206ENST00000557358 RAD50Q92878 1312 aa16.35■□□□□ 0.21
VPS33B-206ENST00000557358 KIAA0100Q14667 2235 aaKnown RBP16.35■□□□□ 0.21
VPS33B-206ENST00000557358 DOCK3Q8IZD9 2030 aa16.35■□□□□ 0.21
VPS33B-206ENST00000557358 SPDYE16A6NNV3 312 aaPredicted RBP16.34■□□□□ 0.21
VPS33B-206ENST00000557358 CTGFP29279 349 aa16.34■□□□□ 0.21
VPS33B-206ENST00000557358 CAP1Q01518 475 aa16.34■□□□□ 0.21
VPS33B-206ENST00000557358 FAM47AQ5JRC9 791 aa16.34■□□□□ 0.21
VPS33B-206ENST00000557358 RRP12Q5JTH9 1297 aaKnown RBP16.34■□□□□ 0.21
VPS33B-206ENST00000557358 PLEKHH3Q7Z736 793 aa16.34■□□□□ 0.21
VPS33B-206ENST00000557358 TRMT44Q8IYL2 757 aaKnown RBP16.34■□□□□ 0.21
VPS33B-206ENST00000557358 PXYLP1Q8TE99 480 aa16.34■□□□□ 0.21
VPS33B-206ENST00000557358 SH3TC2Q8TF17 1288 aa16.34■□□□□ 0.21
VPS33B-206ENST00000557358 CEP95Q96GE4 821 aa16.34■□□□□ 0.21
VPS33B-206ENST00000557358 ZNF333Q96JL9 665 aa16.34■□□□□ 0.21
VPS33B-206ENST00000557358 MYH4Q9Y623 1939 aa16.34■□□□□ 0.21
VPS33B-206ENST00000557358 PLIN4Q96Q06 1357 aa16.34■□□□□ 0.21
VPS33B-206ENST00000557358 ZSWIM8A7E2V4 1837 aa16.33■□□□□ 0.21
VPS33B-206ENST00000557358 F5H6K3 240 aa16.33■□□□□ 0.2
VPS33B-206ENST00000557358 ORC4O43929 436 aa16.33■□□□□ 0.2
VPS33B-206ENST00000557358 DSG3P32926 999 aa16.33■□□□□ 0.2
VPS33B-206ENST00000557358 RGS19P49795 217 aa16.33■□□□□ 0.2
VPS33B-206ENST00000557358 KLRC3Q07444 240 aa16.33■□□□□ 0.2
VPS33B-206ENST00000557358 PLS1Q14651 629 aa16.33■□□□□ 0.2
VPS33B-206ENST00000557358 IMMTQ16891 758 aaKnown RBP16.33■□□□□ 0.2
VPS33B-206ENST00000557358 SIAH1Q8IUQ4 282 aa16.33■□□□□ 0.2
VPS33B-206ENST00000557358 NKX2-3Q8TAU0 364 aa16.33■□□□□ 0.2
VPS33B-206ENST00000557358 DSCC1Q9BVC3 393 aa16.33■□□□□ 0.2
VPS33B-206ENST00000557358 TXNRD2Q9NNW7 524 aa16.33■□□□□ 0.2
VPS33B-206ENST00000557358 GABRQQ9UN88 632 aa16.33■□□□□ 0.2
VPS33B-206ENST00000557358 STX8Q9UNK0 236 aa16.33■□□□□ 0.2
VPS33B-206ENST00000557358 COPB2P35606 906 aa16.32■□□□□ 0.2
VPS33B-206ENST00000557358 RGS2P41220 211 aa16.32■□□□□ 0.2
VPS33B-206ENST00000557358 HAND2P61296 217 aa16.32■□□□□ 0.2
VPS33B-206ENST00000557358 CCDC178Q5BJE1 867 aa16.32■□□□□ 0.2
VPS33B-206ENST00000557358 FAM83BQ5T0W9 1011 aa16.32■□□□□ 0.2
VPS33B-206ENST00000557358 AKNAD1Q5T1N1 836 aa16.32■□□□□ 0.2
VPS33B-206ENST00000557358 MKL1Q969V6 931 aa16.32■□□□□ 0.2
VPS33B-206ENST00000557358 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.32■□□□□ 0.2
VPS33B-206ENST00000557358 PPP4R2Q9NY27 417 aa16.32■□□□□ 0.2
VPS33B-206ENST00000557358 SLC5A4Q9NY91 659 aa16.32■□□□□ 0.2
VPS33B-206ENST00000557358 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.32■□□□□ 0.2
VPS33B-206ENST00000557358 IGKV6D-41A0A0C4DH26 115 aa16.31■□□□□ 0.2
VPS33B-206ENST00000557358 FOXP2O15409 715 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms