RNA–Protein interactions for RNA: ENST00000557356.5

PSEN1-222, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-222ENST00000557356 CASP8AP2Q9UKL3 1982 aa9.3□□□□□ -0.92
PSEN1-222ENST00000557356 CDK5RAP2Q96SN8 1893 aa9.3□□□□□ -0.92
PSEN1-222ENST00000557356 TNPO2O14787 897 aaKnown RBP9.3□□□□□ -0.92
PSEN1-222ENST00000557356 WDR46O15213 610 aaKnown RBP9.3□□□□□ -0.92
PSEN1-222ENST00000557356 TTLL1O95922 423 aa9.3□□□□□ -0.92
PSEN1-222ENST00000557356 FGRP09769 529 aa9.3□□□□□ -0.92
PSEN1-222ENST00000557356 VCAM1P19320 739 aa9.3□□□□□ -0.92
PSEN1-222ENST00000557356 PDE4AP27815 886 aa9.3□□□□□ -0.92
PSEN1-222ENST00000557356 TFAP4Q01664 338 aa9.3□□□□□ -0.92
PSEN1-222ENST00000557356 IMMTQ16891 758 aaKnown RBP9.3□□□□□ -0.92
PSEN1-222ENST00000557356 CASC1Q6TDU7 716 aa9.3□□□□□ -0.92
PSEN1-222ENST00000557356 CCDC129Q6ZRS4 1044 aa9.3□□□□□ -0.92
PSEN1-222ENST00000557356 KIAA1211Q6ZU35 1233 aa9.3□□□□□ -0.92
PSEN1-222ENST00000557356 RAET1EQ8TD07 263 aa9.3□□□□□ -0.92
PSEN1-222ENST00000557356 TRIM47Q96LD4 638 aa9.3□□□□□ -0.92
PSEN1-222ENST00000557356 TANGO6Q9C0B7 1094 aa9.3□□□□□ -0.92
PSEN1-222ENST00000557356 RPAP3Q9H6T3 665 aaPredicted RBP9.3□□□□□ -0.92
PSEN1-222ENST00000557356 CWC22Q9HCG8 908 aaKnown RBP9.3□□□□□ -0.92
PSEN1-222ENST00000557356 CLIP2Q9UDT6 1046 aa9.3□□□□□ -0.92
PSEN1-222ENST00000557356 SRRDQ9UH36 339 aa9.3□□□□□ -0.92
PSEN1-222ENST00000557356 HPS5Q9UPZ3 1129 aa9.3□□□□□ -0.92
PSEN1-222ENST00000557356 CEP350Q5VT06 3117 aa9.29□□□□□ -0.92
PSEN1-222ENST00000557356 A0A1W2PRG0 241 aa9.29□□□□□ -0.92
PSEN1-222ENST00000557356 RANBP6O60518 1105 aaKnown RBP9.29□□□□□ -0.92
PSEN1-222ENST00000557356 FDX1P10109 184 aa9.29□□□□□ -0.92
PSEN1-222ENST00000557356 IRF5Q13568 498 aa9.29□□□□□ -0.92
PSEN1-222ENST00000557356 SHROOM1Q2M3G4 852 aaPredicted RBP9.29□□□□□ -0.92
PSEN1-222ENST00000557356 SLC9C1Q4G0N8 1177 aa9.29□□□□□ -0.92
PSEN1-222ENST00000557356 AKNAD1Q5T1N1 836 aa9.29□□□□□ -0.92
PSEN1-222ENST00000557356 VPS53Q5VIR6 699 aa9.29□□□□□ -0.92
PSEN1-222ENST00000557356 SIAH1Q8IUQ4 282 aa9.29□□□□□ -0.92
PSEN1-222ENST00000557356 TRMT44Q8IYL2 757 aaKnown RBP9.29□□□□□ -0.92
PSEN1-222ENST00000557356 STK11IPQ8N1F8 1099 aa9.29□□□□□ -0.92
PSEN1-222ENST00000557356 PXYLP1Q8TE99 480 aa9.29□□□□□ -0.92
PSEN1-222ENST00000557356 ESR2Q92731 530 aa9.29□□□□□ -0.92
PSEN1-222ENST00000557356 TTC14Q96N46 770 aa9.29□□□□□ -0.92
PSEN1-222ENST00000557356 TMEM106CQ9BVX2 250 aa9.29□□□□□ -0.92
PSEN1-222ENST00000557356 CNNM2Q9H8M5 875 aa9.29□□□□□ -0.92
PSEN1-222ENST00000557356 TOMM22Q9NS69 142 aa9.29□□□□□ -0.92
PSEN1-222ENST00000557356 MTMR4Q9NYA4 1195 aa9.29□□□□□ -0.92
PSEN1-222ENST00000557356 NAV1Q8NEY1 1877 aa9.28□□□□□ -0.92
PSEN1-222ENST00000557356 IGKV6D-41A0A0C4DH26 115 aa9.28□□□□□ -0.92
PSEN1-222ENST00000557356 F5H6K3 240 aa9.28□□□□□ -0.92
PSEN1-222ENST00000557356 STRNO43815 780 aa9.28□□□□□ -0.92
PSEN1-222ENST00000557356 RAD21O60216 631 aa9.28□□□□□ -0.92
PSEN1-222ENST00000557356 PRDM1O75626 825 aa9.28□□□□□ -0.92
PSEN1-222ENST00000557356 FLOT1O75955 427 aa9.28□□□□□ -0.92
PSEN1-222ENST00000557356 GSPT1P15170 499 aaKnown RBP9.28□□□□□ -0.92
PSEN1-222ENST00000557356 CHMLP26374 656 aa9.28□□□□□ -0.92
PSEN1-222ENST00000557356 GRK4P32298 578 aa9.28□□□□□ -0.92
PSEN1-222ENST00000557356 DSG3P32926 999 aa9.28□□□□□ -0.92
PSEN1-222ENST00000557356 COPB2P35606 906 aa9.28□□□□□ -0.92
PSEN1-222ENST00000557356 ERVK-9P63128 1117 aa9.28□□□□□ -0.92
PSEN1-222ENST00000557356 ERVK-24P63145 666 aa9.28□□□□□ -0.92
PSEN1-222ENST00000557356 UBXN2AP68543 259 aa9.28□□□□□ -0.92
PSEN1-222ENST00000557356 EVX2Q03828 476 aa9.28□□□□□ -0.92
PSEN1-222ENST00000557356 CTDSPL2Q05D32 466 aa9.28□□□□□ -0.92
PSEN1-222ENST00000557356 KLRC3Q07444 240 aa9.28□□□□□ -0.92
PSEN1-222ENST00000557356 TRDNQ13061 729 aa9.28□□□□□ -0.92
PSEN1-222ENST00000557356 BMP2KLQ5H9B9 411 aa9.28□□□□□ -0.92
PSEN1-222ENST00000557356 RCSD1Q6JBY9 416 aa9.28□□□□□ -0.92
PSEN1-222ENST00000557356 ZNF589Q86UQ0 364 aaPredicted RBP9.28□□□□□ -0.92
PSEN1-222ENST00000557356 IQCA1Q86XH1 822 aa9.28□□□□□ -0.92
PSEN1-222ENST00000557356 PRPF38AQ8NAV1 312 aaKnown RBP9.28□□□□□ -0.92
PSEN1-222ENST00000557356 SLAIN1Q8ND83 568 aa9.28□□□□□ -0.92
PSEN1-222ENST00000557356 GMCL1P1Q8NEA9 526 aa9.28□□□□□ -0.92
PSEN1-222ENST00000557356 CHURC1Q8WUH1 139 aa9.28□□□□□ -0.92
PSEN1-222ENST00000557356 STAG1Q8WVM7 1258 aa9.28□□□□□ -0.92
PSEN1-222ENST00000557356 SOCS4Q8WXH5 440 aa9.28□□□□□ -0.92
PSEN1-222ENST00000557356 ARMC5Q96C12 935 aa9.28□□□□□ -0.92
PSEN1-222ENST00000557356 NUDT12Q9BQG2 462 aa9.28□□□□□ -0.92
PSEN1-222ENST00000557356 TCP11L1Q9NUJ3 509 aa9.28□□□□□ -0.92
PSEN1-222ENST00000557356 SLC5A4Q9NY91 659 aa9.28□□□□□ -0.92
PSEN1-222ENST00000557356 RBPJLQ9UBG7 517 aa9.28□□□□□ -0.92
PSEN1-222ENST00000557356 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.28□□□□□ -0.92
PSEN1-222ENST00000557356 CTDP1Q9Y5B0 961 aaPredicted RBP9.28□□□□□ -0.92
PSEN1-222ENST00000557356 IVNS1ABPQ9Y6Y0 642 aa9.28□□□□□ -0.92
PSEN1-222ENST00000557356 SIPA1L1O43166 1804 aa9.28□□□□□ -0.92
PSEN1-222ENST00000557356 PLIN4Q96Q06 1357 aa9.27□□□□□ -0.93
PSEN1-222ENST00000557356 FOXP2O15409 715 aa9.27□□□□□ -0.93
PSEN1-222ENST00000557356 CAPN15O75808 1086 aa9.27□□□□□ -0.93
PSEN1-222ENST00000557356 SLC25A27O95847 323 aa9.27□□□□□ -0.93
PSEN1-222ENST00000557356 XRCC5P13010 732 aaKnown RBP9.27□□□□□ -0.93
PSEN1-222ENST00000557356 FAM47AQ5JRC9 791 aa9.27□□□□□ -0.93
PSEN1-222ENST00000557356 SPICE1Q8N0Z3 855 aa9.27□□□□□ -0.93
PSEN1-222ENST00000557356 SHCBP1Q8NEM2 672 aa9.27□□□□□ -0.93
PSEN1-222ENST00000557356 NKX2-3Q8TAU0 364 aa9.27□□□□□ -0.93
PSEN1-222ENST00000557356 CEP95Q96GE4 821 aa9.27□□□□□ -0.93
PSEN1-222ENST00000557356 PAGR1Q9BTK6 254 aa9.27□□□□□ -0.93
PSEN1-222ENST00000557356 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.27□□□□□ -0.93
PSEN1-222ENST00000557356 KRT23Q9C075 422 aa9.27□□□□□ -0.93
PSEN1-222ENST00000557356 PPP4R2Q9NY27 417 aa9.27□□□□□ -0.93
PSEN1-222ENST00000557356 BIN2Q9UBW5 565 aaPredicted RBP9.27□□□□□ -0.93
PSEN1-222ENST00000557356 FEM1BQ9UK73 627 aa9.27□□□□□ -0.93
PSEN1-222ENST00000557356 DDX60LQ5H9U9 1706 aaKnown RBP9.27□□□□□ -0.93
PSEN1-222ENST00000557356 PHIPQ8WWQ0 1821 aa9.26□□□□□ -0.93
PSEN1-222ENST00000557356 SLC15A5A6NIM6 579 aa9.26□□□□□ -0.93
PSEN1-222ENST00000557356 SPDYE16A6NNV3 312 aaPredicted RBP9.26□□□□□ -0.93
PSEN1-222ENST00000557356 SMIM22K7EJ46 135 aa9.26□□□□□ -0.93
PSEN1-222ENST00000557356 SGSM2O43147 1006 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms