RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 SPACA7Q96KW9 195 aa6.49□□□□□ -1.37
SCFD1-223ENST00000557076 POLKQ9UBT6 870 aa6.49□□□□□ -1.37
SCFD1-223ENST00000557076 RAXQ9Y2V3 346 aa6.49□□□□□ -1.37
SCFD1-223ENST00000557076 KLRG2A4D1S0 409 aaPredicted RBP6.48□□□□□ -1.37
SCFD1-223ENST00000557076 SMNDC1O75940 238 aaKnown RBP eCLIP6.48□□□□□ -1.37
SCFD1-223ENST00000557076 FKBP4Q02790 459 aaKnown RBP eCLIP6.48□□□□□ -1.37
SCFD1-223ENST00000557076 FMR1Q06787 632 aaKnown RBP eCLIP6.48□□□□□ -1.37
SCFD1-223ENST00000557076 GRM1Q13255 1194 aa6.48□□□□□ -1.37
SCFD1-223ENST00000557076 EIF4A2Q14240 407 aaKnown RBP6.48□□□□□ -1.37
SCFD1-223ENST00000557076 CCDC93Q567U6 631 aa6.48□□□□□ -1.37
SCFD1-223ENST00000557076 HABP4Q5JVS0 413 aaKnown RBP6.48□□□□□ -1.37
SCFD1-223ENST00000557076 C1orf141Q5JVX7 400 aa6.48□□□□□ -1.37
SCFD1-223ENST00000557076 TBC1D9BQ66K14 1250 aa6.48□□□□□ -1.37
SCFD1-223ENST00000557076 PRR5LQ6MZQ0 368 aa6.48□□□□□ -1.37
SCFD1-223ENST00000557076 KRTAP1-3Q8IUG1 177 aa6.48□□□□□ -1.37
SCFD1-223ENST00000557076 SETDB2Q96T68 719 aa6.48□□□□□ -1.37
SCFD1-223ENST00000557076 KRTAP4-12Q9BQ66 201 aa6.48□□□□□ -1.37
SCFD1-223ENST00000557076 CEP41Q9BYV8 373 aa6.48□□□□□ -1.37
SCFD1-223ENST00000557076 SAP130Q9H0E3 1048 aa6.48□□□□□ -1.37
SCFD1-223ENST00000557076 ZNF277Q9NRM2 450 aaPredicted RBP6.48□□□□□ -1.37
SCFD1-223ENST00000557076 ZBTB1Q9Y2K1 713 aa6.48□□□□□ -1.37
SCFD1-223ENST00000557076 ZNF831Q5JPB2 1677 aa6.48□□□□□ -1.37
SCFD1-223ENST00000557076 RNF123Q5XPI4 1314 aa6.48□□□□□ -1.37
SCFD1-223ENST00000557076 ZNF541Q9H0D2 1346 aa6.48□□□□□ -1.37
SCFD1-223ENST00000557076 TRAF5O00463 557 aa6.47□□□□□ -1.37
SCFD1-223ENST00000557076 STARD3NLO95772 234 aa6.47□□□□□ -1.37
SCFD1-223ENST00000557076 NPR1P16066 1061 aa6.47□□□□□ -1.37
SCFD1-223ENST00000557076 EPS15P42566 896 aa6.47□□□□□ -1.37
SCFD1-223ENST00000557076 SOX10P56693 466 aa6.47□□□□□ -1.37
SCFD1-223ENST00000557076 NOGQ13253 232 aa6.47□□□□□ -1.37
SCFD1-223ENST00000557076 UVSSAQ2YD98 709 aa6.47□□□□□ -1.37
SCFD1-223ENST00000557076 CIAPIN1Q6FI81 312 aa6.47□□□□□ -1.37
SCFD1-223ENST00000557076 AGGF1Q8N302 714 aaeCLIP6.47□□□□□ -1.37
SCFD1-223ENST00000557076 JDP2Q8WYK2 163 aa6.47□□□□□ -1.37
SCFD1-223ENST00000557076 SAGE1Q9NXZ1 904 aa6.47□□□□□ -1.37
SCFD1-223ENST00000557076 PGAP2Q9UHJ9 254 aa6.47□□□□□ -1.37
SCFD1-223ENST00000557076 ZMIZ1Q9ULJ6 1067 aa6.47□□□□□ -1.37
SCFD1-223ENST00000557076 GTF3C3Q9Y5Q9 886 aa6.47□□□□□ -1.37
SCFD1-223ENST00000557076 COL15A1P39059 1388 aa6.46□□□□□ -1.37
SCFD1-223ENST00000557076 CARMIL3Q8ND23 1372 aa6.46□□□□□ -1.37
SCFD1-223ENST00000557076 LINC01387J3KSC0 135 aa6.46□□□□□ -1.38
SCFD1-223ENST00000557076 DHX15O43143 795 aaKnown RBP6.46□□□□□ -1.38
SCFD1-223ENST00000557076 KIF4AO95239 1232 aa6.46□□□□□ -1.38
SCFD1-223ENST00000557076 CELF2O95319 508 aaKnown RBP6.46□□□□□ -1.38
SCFD1-223ENST00000557076 CANXP27824 592 aaKnown RBP6.46□□□□□ -1.38
SCFD1-223ENST00000557076 CD68P34810 354 aaPredicted RBP6.46□□□□□ -1.38
SCFD1-223ENST00000557076 IARSP41252 1262 aaKnown RBP6.46□□□□□ -1.38
SCFD1-223ENST00000557076 ZAP70P43403 619 aa6.46□□□□□ -1.38
SCFD1-223ENST00000557076 CD97P48960 835 aa6.46□□□□□ -1.38
SCFD1-223ENST00000557076 PKN2Q16513 984 aaKnown RBP6.46□□□□□ -1.38
SCFD1-223ENST00000557076 TTC39BQ5VTQ0 682 aaPredicted RBP6.46□□□□□ -1.38
SCFD1-223ENST00000557076 MCTP1Q6DN14 999 aa6.46□□□□□ -1.38
SCFD1-223ENST00000557076 SYNE4Q8N205 404 aa6.46□□□□□ -1.38
SCFD1-223ENST00000557076 CNBD1Q8NA66 436 aa6.46□□□□□ -1.38
SCFD1-223ENST00000557076 PSMD1Q99460 953 aa6.46□□□□□ -1.38
SCFD1-223ENST00000557076 SLC52A2Q9HAB3 445 aa6.46□□□□□ -1.38
SCFD1-223ENST00000557076 CXXC1Q9P0U4 656 aaPredicted RBP6.46□□□□□ -1.38
SCFD1-223ENST00000557076 CASP8AP2Q9UKL3 1982 aa6.46□□□□□ -1.38
SCFD1-223ENST00000557076 SCN4AP35499 1836 aa6.46□□□□□ -1.38
SCFD1-223ENST00000557076 FAM177BA6PVY3 158 aa6.45□□□□□ -1.38
SCFD1-223ENST00000557076 TNFRSF10BO14763 440 aa6.45□□□□□ -1.38
SCFD1-223ENST00000557076 IGLV1-40P01703 118 aa6.45□□□□□ -1.38
SCFD1-223ENST00000557076 CDC27P30260 824 aa6.45□□□□□ -1.38
SCFD1-223ENST00000557076 ALDH1B1P30837 517 aa6.45□□□□□ -1.38
SCFD1-223ENST00000557076 SSTR4P31391 388 aa6.45□□□□□ -1.38
SCFD1-223ENST00000557076 SCNN1AP37088 669 aa6.45□□□□□ -1.38
SCFD1-223ENST00000557076 EIF6P56537 245 aaKnown RBP6.45□□□□□ -1.38
SCFD1-223ENST00000557076 ST5P78524 1137 aa6.45□□□□□ -1.38
SCFD1-223ENST00000557076 SLC39A6Q13433 755 aa6.45□□□□□ -1.38
SCFD1-223ENST00000557076 AKAP4Q5JQC9 854 aa6.45□□□□□ -1.38
SCFD1-223ENST00000557076 CEP135Q66GS9 1140 aa6.45□□□□□ -1.38
SCFD1-223ENST00000557076 FAM117BQ6P1L5 589 aa6.45□□□□□ -1.38
SCFD1-223ENST00000557076 CLEC4GQ6UXB4 293 aa6.45□□□□□ -1.38
SCFD1-223ENST00000557076 CTU1Q7Z7A3 348 aaKnown RBP6.45□□□□□ -1.38
SCFD1-223ENST00000557076 KLHL23Q8NBE8 558 aa6.45□□□□□ -1.38
SCFD1-223ENST00000557076 GALNT11Q8NCW6 608 aa6.45□□□□□ -1.38
SCFD1-223ENST00000557076 TEX13AQ9BXU3 409 aaPredicted RBP6.45□□□□□ -1.38
SCFD1-223ENST00000557076 LACRTQ9GZZ8 138 aa6.45□□□□□ -1.38
SCFD1-223ENST00000557076 LGR6Q9HBX8 967 aa6.45□□□□□ -1.38
SCFD1-223ENST00000557076 ABI2Q9NYB9 513 aaPredicted RBP6.45□□□□□ -1.38
SCFD1-223ENST00000557076 STOML1Q9UBI4 398 aa6.45□□□□□ -1.38
SCFD1-223ENST00000557076 CCDC88AQ3V6T2 1871 aa6.45□□□□□ -1.38
SCFD1-223ENST00000557076 NPHP1O15259 732 aa6.44□□□□□ -1.38
SCFD1-223ENST00000557076 IL6STP40189 918 aaPredicted RBP6.44□□□□□ -1.38
SCFD1-223ENST00000557076 ATP11AP98196 1134 aa6.44□□□□□ -1.38
SCFD1-223ENST00000557076 LCE3BQ5TA77 95 aa6.44□□□□□ -1.38
SCFD1-223ENST00000557076 ACAD11Q709F0 780 aa6.44□□□□□ -1.38
SCFD1-223ENST00000557076 UBL7Q96S82 380 aaPredicted RBP6.44□□□□□ -1.38
SCFD1-223ENST00000557076 MKNK1Q9BUB5 465 aa6.44□□□□□ -1.38
SCFD1-223ENST00000557076 RNF186Q9NXI6 227 aa6.44□□□□□ -1.38
SCFD1-223ENST00000557076 STIM2Q9P246 746 aa6.44□□□□□ -1.38
SCFD1-223ENST00000557076 DICER1Q9UPY3 1922 aaKnown RBP6.44□□□□□ -1.38
SCFD1-223ENST00000557076 NRXN2Q9P2S2 1712 aa6.43□□□□□ -1.38
SCFD1-223ENST00000557076 KIAA1324LA8MWY0 1029 aaPredicted RBP6.43□□□□□ -1.38
SCFD1-223ENST00000557076 COBLO75128 1261 aa6.43□□□□□ -1.38
SCFD1-223ENST00000557076 FXR1P51114 621 aaKnown RBP eCLIP6.43□□□□□ -1.38
SCFD1-223ENST00000557076 FAM26DQ5JW98 314 aa6.43□□□□□ -1.38
SCFD1-223ENST00000557076 OLFM4Q6UX06 510 aa6.43□□□□□ -1.38
SCFD1-223ENST00000557076 TPTE2Q6XPS3 522 aa6.43□□□□□ -1.38
SCFD1-223ENST00000557076 CDC37L1Q7L3B6 337 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms