RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 METTL5Q9NRN9 209 aaKnown RBP8.24□□□□□ -1.09
HIF1A-209ENST00000556827 TARBP1Q13395 1621 aaKnown RBP8.24□□□□□ -1.09
HIF1A-209ENST00000556827 ARAP1Q96P48 1450 aa8.24□□□□□ -1.09
HIF1A-209ENST00000556827 UPK3BL1B0FP48 263 aa8.23□□□□□ -1.09
HIF1A-209ENST00000556827 UPK3BL2E5RIL1 263 aa8.23□□□□□ -1.09
HIF1A-209ENST00000556827 RBAK-RBAKDNI3L0D1 243 aa8.23□□□□□ -1.09
HIF1A-209ENST00000556827 FARP2O94887 1054 aaPredicted RBP8.23□□□□□ -1.09
HIF1A-209ENST00000556827 TNNI2P48788 182 aa8.23□□□□□ -1.09
HIF1A-209ENST00000556827 GOLM1Q8NBJ4 401 aa8.23□□□□□ -1.09
HIF1A-209ENST00000556827 CCDC120Q96HB5 630 aa8.23□□□□□ -1.09
HIF1A-209ENST00000556827 ALPK1Q96QP1 1244 aa8.23□□□□□ -1.09
HIF1A-209ENST00000556827 SLAMF8Q9P0V8 285 aa8.23□□□□□ -1.09
HIF1A-209ENST00000556827 KLHL3Q9UH77 587 aa8.23□□□□□ -1.09
HIF1A-209ENST00000556827 CEP131Q9UPN4 1083 aa8.23□□□□□ -1.09
HIF1A-209ENST00000556827 GRIN2BQ13224 1484 aa8.23□□□□□ -1.09
HIF1A-209ENST00000556827 SNAPC4Q5SXM2 1469 aa8.23□□□□□ -1.09
HIF1A-209ENST00000556827 FGD5Q6ZNL6 1462 aa8.22□□□□□ -1.09
HIF1A-209ENST00000556827 MAGI1Q96QZ7 1491 aaPredicted RBP8.22□□□□□ -1.09
HIF1A-209ENST00000556827 LRRC10BA6NIK2 292 aa8.22□□□□□ -1.09
HIF1A-209ENST00000556827 GRIN3BO60391 1043 aa8.22□□□□□ -1.09
HIF1A-209ENST00000556827 PKN1Q16512 942 aa8.22□□□□□ -1.09
HIF1A-209ENST00000556827 TMEM201Q5SNT2 666 aa8.22□□□□□ -1.09
HIF1A-209ENST00000556827 TMPRSS7Q7RTY8 843 aa8.22□□□□□ -1.09
HIF1A-209ENST00000556827 USP48Q86UV5 1035 aa8.22□□□□□ -1.09
HIF1A-209ENST00000556827 KSR1Q8IVT5 923 aa8.22□□□□□ -1.09
HIF1A-209ENST00000556827 KIRREL1Q96J84 757 aa8.22□□□□□ -1.09
HIF1A-209ENST00000556827 REV1Q9UBZ9 1251 aa8.22□□□□□ -1.09
HIF1A-209ENST00000556827 GARTP22102 1010 aa8.21□□□□□ -1.1
HIF1A-209ENST00000556827 GDNFP39905 211 aa8.21□□□□□ -1.1
HIF1A-209ENST00000556827 RACK1P63244 317 aaKnown RBP8.21□□□□□ -1.1
HIF1A-209ENST00000556827 FYB2Q5VWT5 728 aa8.21□□□□□ -1.1
HIF1A-209ENST00000556827 FBXL19Q6PCT2 694 aa8.21□□□□□ -1.1
HIF1A-209ENST00000556827 NT5DC4Q86YG4 428 aa8.21□□□□□ -1.1
HIF1A-209ENST00000556827 Q96M66 194 aa8.21□□□□□ -1.1
HIF1A-209ENST00000556827 TRIT1Q9H3H1 467 aaKnown RBP8.21□□□□□ -1.1
HIF1A-209ENST00000556827 FAM53CQ9NYF3 392 aa8.21□□□□□ -1.1
HIF1A-209ENST00000556827 ADAMTS1Q9UHI8 967 aa8.21□□□□□ -1.1
HIF1A-209ENST00000556827 KCNH3Q9ULD8 1083 aa8.21□□□□□ -1.1
HIF1A-209ENST00000556827 SYNJ1O43426 1573 aa8.2□□□□□ -1.1
HIF1A-209ENST00000556827 HTR3BO95264 441 aa8.2□□□□□ -1.1
HIF1A-209ENST00000556827 TCF3P15923 654 aa8.2□□□□□ -1.1
HIF1A-209ENST00000556827 EIF4A3P38919 411 aaKnown RBP8.2□□□□□ -1.1
HIF1A-209ENST00000556827 MLANAQ16655 118 aa8.2□□□□□ -1.1
HIF1A-209ENST00000556827 MPZL3Q6UWV2 235 aa8.2□□□□□ -1.1
HIF1A-209ENST00000556827 CREG2Q8IUH2 290 aa8.2□□□□□ -1.1
HIF1A-209ENST00000556827 SLFN12Q8IYM2 578 aa8.2□□□□□ -1.1
HIF1A-209ENST00000556827 FBXO27Q8NI29 283 aa8.2□□□□□ -1.1
HIF1A-209ENST00000556827 PPP1R13LQ8WUF5 828 aa8.2□□□□□ -1.1
HIF1A-209ENST00000556827 SLC38A3Q99624 504 aa8.2□□□□□ -1.1
HIF1A-209ENST00000556827 GPATCH2Q9NW75 528 aa8.2□□□□□ -1.1
HIF1A-209ENST00000556827 CHD1O14646 1710 aa8.2□□□□□ -1.1
HIF1A-209ENST00000556827 SYNJ2O15056 1496 aa8.19□□□□□ -1.1
HIF1A-209ENST00000556827 WDR97A6NE52 1622 aa8.19□□□□□ -1.1
HIF1A-209ENST00000556827 ZNF503-AS2A6NEH8 195 aa8.19□□□□□ -1.1
HIF1A-209ENST00000556827 TLR3O15455 904 aaKnown RBP8.19□□□□□ -1.1
HIF1A-209ENST00000556827 RAC2P15153 192 aa8.19□□□□□ -1.1
HIF1A-209ENST00000556827 TPP2P29144 1249 aaPredicted RBP8.19□□□□□ -1.1
HIF1A-209ENST00000556827 CHMP4BP1P59074 171 aa8.19□□□□□ -1.1
HIF1A-209ENST00000556827 MPP2Q14168 576 aa8.19□□□□□ -1.1
HIF1A-209ENST00000556827 ZNF124Q15973 351 aa8.19□□□□□ -1.1
HIF1A-209ENST00000556827 TMEM67Q5HYA8 995 aa8.19□□□□□ -1.1
HIF1A-209ENST00000556827 REC114Q7Z4M0 266 aa8.19□□□□□ -1.1
HIF1A-209ENST00000556827 DTWD2Q8NBA8 298 aa8.19□□□□□ -1.1
HIF1A-209ENST00000556827 ZNF296Q8WUU4 475 aaPredicted RBP8.19□□□□□ -1.1
HIF1A-209ENST00000556827 LIN37Q96GY3 246 aaPredicted RBP8.19□□□□□ -1.1
HIF1A-209ENST00000556827 C19orf73Q9NVV2 129 aa8.19□□□□□ -1.1
HIF1A-209ENST00000556827 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.19□□□□□ -1.1
HIF1A-209ENST00000556827 DDX41Q9UJV9 622 aaKnown RBP8.19□□□□□ -1.1
HIF1A-209ENST00000556827 POLR3KQ9Y2Y1 108 aaPredicted RBP8.19□□□□□ -1.1
HIF1A-209ENST00000556827 ESR1P03372 595 aa8.18□□□□□ -1.1
HIF1A-209ENST00000556827 GLI1P08151 1106 aa8.18□□□□□ -1.1
HIF1A-209ENST00000556827 FZD5Q13467 585 aa8.18□□□□□ -1.1
HIF1A-209ENST00000556827 FAM196AQ6ZSG2 479 aa8.18□□□□□ -1.1
HIF1A-209ENST00000556827 TTC6Q86TZ1 520 aa8.18□□□□□ -1.1
HIF1A-209ENST00000556827 PHACTR4Q8IZ21 702 aa8.18□□□□□ -1.1
HIF1A-209ENST00000556827 RNF141Q8WVD5 230 aa8.18□□□□□ -1.1
HIF1A-209ENST00000556827 DUSP13Q9UII6 198 aa8.18□□□□□ -1.1
HIF1A-209ENST00000556827 PRR36Q9H6K5 1346 aa8.18□□□□□ -1.1
HIF1A-209ENST00000556827 GAPVD1Q14C86 1478 aa8.18□□□□□ -1.1
HIF1A-209ENST00000556827 DNAJC25-GNG10A0A024R161 153 aa8.17□□□□□ -1.1
HIF1A-209ENST00000556827 WASH4PA8MWX3 477 aa8.17□□□□□ -1.1
HIF1A-209ENST00000556827 CHURC1-FNTBB4DL54 471 aa8.17□□□□□ -1.1
HIF1A-209ENST00000556827 RAD51AP2Q09MP3 1159 aa8.17□□□□□ -1.1
HIF1A-209ENST00000556827 MLECQ14165 292 aa8.17□□□□□ -1.1
HIF1A-209ENST00000556827 CWF19L2Q2TBE0 894 aaKnown RBP8.17□□□□□ -1.1
HIF1A-209ENST00000556827 NPM2Q86SE8 214 aaKnown RBP8.17□□□□□ -1.1
HIF1A-209ENST00000556827 CCDC74BQ96LY2 380 aa8.17□□□□□ -1.1
HIF1A-209ENST00000556827 DUSP15Q9H1R2 295 aaPredicted RBP8.17□□□□□ -1.1
HIF1A-209ENST00000556827 IGSF5Q9NSI5 407 aa8.17□□□□□ -1.1
HIF1A-209ENST00000556827 TMEM59LQ9UK28 342 aa8.17□□□□□ -1.1
HIF1A-209ENST00000556827 GREM1O60565 184 aa8.16□□□□□ -1.1
HIF1A-209ENST00000556827 LTKP29376 864 aa8.16□□□□□ -1.1
HIF1A-209ENST00000556827 CUX1P39880 1505 aa8.16□□□□□ -1.1
HIF1A-209ENST00000556827 CRKP46108 304 aa8.16□□□□□ -1.1
HIF1A-209ENST00000556827 HK2P52789 917 aa8.16□□□□□ -1.1
HIF1A-209ENST00000556827 JAG1P78504 1218 aa8.16□□□□□ -1.1
HIF1A-209ENST00000556827 RALGPS1Q5JS13 557 aa8.16□□□□□ -1.1
HIF1A-209ENST00000556827 BAHD1Q8TBE0 780 aaPredicted RBP8.16□□□□□ -1.1
HIF1A-209ENST00000556827 FAM84AQ96KN4 292 aa8.16□□□□□ -1.1
HIF1A-209ENST00000556827 SPON2Q9BUD6 331 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms