RNA–Protein interactions for RNA: ENST00000556809.1

PABPN1-206, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-206ENST00000556809 HOXD10P28358 340 aa26.73■■□□□ 1.87
PABPN1-206ENST00000556809 RPAP3Q9H6T3 665 aaPredicted RBP26.73■■□□□ 1.87
PABPN1-206ENST00000556809 IGKV6D-41A0A0C4DH26 115 aa26.72■■□□□ 1.87
PABPN1-206ENST00000556809 SGSM2O43147 1006 aa26.72■■□□□ 1.87
PABPN1-206ENST00000556809 PEX10O60683 326 aa26.72■■□□□ 1.87
PABPN1-206ENST00000556809 PRDM1O75626 825 aa26.72■■□□□ 1.87
PABPN1-206ENST00000556809 FGAP02671 866 aa26.72■■□□□ 1.87
PABPN1-206ENST00000556809 VCPKMTQ9H867 229 aa26.72■■□□□ 1.87
PABPN1-206ENST00000556809 ZNF287Q9HBT7 754 aa26.72■■□□□ 1.87
PABPN1-206ENST00000556809 MYPNQ86TC9 1320 aa26.71■■□□□ 1.87
PABPN1-206ENST00000556809 CDC45O75419 566 aa26.71■■□□□ 1.87
PABPN1-206ENST00000556809 PRKCZQ05513 592 aa26.71■■□□□ 1.87
PABPN1-206ENST00000556809 LBX2Q6XYB7 198 aa26.71■■□□□ 1.87
PABPN1-206ENST00000556809 GTF3C2Q8WUA4 911 aaPredicted RBP26.71■■□□□ 1.87
PABPN1-206ENST00000556809 LPAR1Q92633 364 aa26.71■■□□□ 1.87
PABPN1-206ENST00000556809 DSCC1Q9BVC3 393 aa26.71■■□□□ 1.87
PABPN1-206ENST00000556809 SH2D4AQ9H788 454 aa26.71■■□□□ 1.87
PABPN1-206ENST00000556809 ANAPC4Q9UJX5 808 aa26.71■■□□□ 1.87
PABPN1-206ENST00000556809 GABRQQ9UN88 632 aa26.71■■□□□ 1.87
PABPN1-206ENST00000556809 CENPFP49454 3210 aa26.7■■□□□ 1.87
PABPN1-206ENST00000556809 PARP14Q460N5 1801 aa26.7■■□□□ 1.87
PABPN1-206ENST00000556809 SOX10P56693 466 aa26.7■■□□□ 1.86
PABPN1-206ENST00000556809 ZNF444Q8N0Y2 327 aaPredicted RBP26.7■■□□□ 1.86
PABPN1-206ENST00000556809 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.7■■□□□ 1.86
PABPN1-206ENST00000556809 TACC3Q9Y6A5 838 aa26.7■■□□□ 1.86
PABPN1-206ENST00000556809 TNPO2O14787 897 aaKnown RBP26.69■■□□□ 1.86
PABPN1-206ENST00000556809 CNMDO75829 334 aa26.69■■□□□ 1.86
PABPN1-206ENST00000556809 SLC3A2P08195 630 aaKnown RBP26.69■■□□□ 1.86
PABPN1-206ENST00000556809 PDE4BQ07343 736 aa26.69■■□□□ 1.86
PABPN1-206ENST00000556809 Q3C1V9 767 aa26.69■■□□□ 1.86
PABPN1-206ENST00000556809 SLC9C1Q4G0N8 1177 aa26.69■■□□□ 1.86
PABPN1-206ENST00000556809 GPRC5AQ8NFJ5 357 aa26.69■■□□□ 1.86
PABPN1-206ENST00000556809 ZNF333Q96JL9 665 aa26.69■■□□□ 1.86
PABPN1-206ENST00000556809 NYAP2Q9P242 653 aa26.69■■□□□ 1.86
PABPN1-206ENST00000556809 PLIN4Q96Q06 1357 aa26.69■■□□□ 1.86
PABPN1-206ENST00000556809 RBBP6Q7Z6E9 1792 aaKnown RBP26.69■■□□□ 1.86
PABPN1-206ENST00000556809 PLXNB2O15031 1838 aa26.68■■□□□ 1.86
PABPN1-206ENST00000556809 LAMA4Q16363 1823 aa26.68■■□□□ 1.86
PABPN1-206ENST00000556809 FGRP09769 529 aa26.68■■□□□ 1.86
PABPN1-206ENST00000556809 ERVK-9P63128 1117 aa26.68■■□□□ 1.86
PABPN1-206ENST00000556809 ERVK-24P63145 666 aa26.68■■□□□ 1.86
PABPN1-206ENST00000556809 CTDSPL2Q05D32 466 aa26.68■■□□□ 1.86
PABPN1-206ENST00000556809 CASC1Q6TDU7 716 aa26.68■■□□□ 1.86
PABPN1-206ENST00000556809 ESYT1Q9BSJ8 1104 aa26.68■■□□□ 1.86
PABPN1-206ENST00000556809 MYH4Q9Y623 1939 aa26.68■■□□□ 1.86
PABPN1-206ENST00000556809 SPDYE16A6NNV3 312 aaPredicted RBP26.67■■□□□ 1.86
PABPN1-206ENST00000556809 FLT3LGP49771 235 aa26.67■■□□□ 1.86
PABPN1-206ENST00000556809 SPICE1Q8N0Z3 855 aa26.67■■□□□ 1.86
PABPN1-206ENST00000556809 NEDD1Q8NHV4 660 aa26.67■■□□□ 1.86
PABPN1-206ENST00000556809 RABGAP1Q9Y3P9 1069 aa26.67■■□□□ 1.86
PABPN1-206ENST00000556809 A0A0G2JMZ2 1700 aa26.67■■□□□ 1.86
PABPN1-206ENST00000556809 ATP2B2Q01814 1243 aa26.66■■□□□ 1.86
PABPN1-206ENST00000556809 COG2Q14746 738 aa26.66■■□□□ 1.86
PABPN1-206ENST00000556809 NBPF11Q86T75 865 aa26.66■■□□□ 1.86
PABPN1-206ENST00000556809 RAET1EQ8TD07 263 aa26.66■■□□□ 1.86
PABPN1-206ENST00000556809 SH3TC2Q8TF17 1288 aa26.66■■□□□ 1.86
PABPN1-206ENST00000556809 MKL1Q969V6 931 aa26.66■■□□□ 1.86
PABPN1-206ENST00000556809 COA7Q96BR5 231 aa26.66■■□□□ 1.86
PABPN1-206ENST00000556809 PAGR1Q9BTK6 254 aa26.66■■□□□ 1.86
PABPN1-206ENST00000556809 INCENPQ9NQS7 918 aa26.66■■□□□ 1.86
PABPN1-206ENST00000556809 GJD2Q9UKL4 321 aa26.66■■□□□ 1.86
PABPN1-206ENST00000556809 WDR46O15213 610 aaKnown RBP26.65■■□□□ 1.86
PABPN1-206ENST00000556809 IRF5Q13568 498 aa26.65■■□□□ 1.86
PABPN1-206ENST00000556809 CEP95Q96GE4 821 aa26.65■■□□□ 1.86
PABPN1-206ENST00000556809 MTMR4Q9NYA4 1195 aa26.65■■□□□ 1.86
PABPN1-206ENST00000556809 CTNNA3Q9UI47 895 aa26.65■■□□□ 1.86
PABPN1-206ENST00000556809 HAND2P61296 217 aa26.64■■□□□ 1.86
PABPN1-206ENST00000556809 PTH1RQ03431 593 aa26.64■■□□□ 1.86
PABPN1-206ENST00000556809 FAM47AQ5JRC9 791 aa26.64■■□□□ 1.86
PABPN1-206ENST00000556809 TANGO6Q9C0B7 1094 aa26.64■■□□□ 1.86
PABPN1-206ENST00000556809 PORCNQ9H237 461 aa26.64■■□□□ 1.86
PABPN1-206ENST00000556809 GOPCQ9HD26 462 aa26.64■■□□□ 1.86
PABPN1-206ENST00000556809 HOXC10Q9NYD6 342 aa26.64■■□□□ 1.86
PABPN1-206ENST00000556809 BTBD7Q9P203 1132 aa26.64■■□□□ 1.86
PABPN1-206ENST00000556809 TSPY3P0CV98 308 aa26.63■■□□□ 1.85
PABPN1-206ENST00000556809 TSPY8P0CW00 308 aa26.63■■□□□ 1.85
PABPN1-206ENST00000556809 GRK4P32298 578 aa26.63■■□□□ 1.85
PABPN1-206ENST00000556809 DSG3P32926 999 aa26.63■■□□□ 1.85
PABPN1-206ENST00000556809 TFAP4Q01664 338 aa26.63■■□□□ 1.85
PABPN1-206ENST00000556809 KIAA1211Q6ZU35 1233 aa26.63■■□□□ 1.85
PABPN1-206ENST00000556809 GTF3C3Q9Y5Q9 886 aa26.63■■□□□ 1.85
PABPN1-206ENST00000556809 ZNF213O14771 459 aa26.62■■□□□ 1.85
PABPN1-206ENST00000556809 ORC4O43929 436 aa26.62■■□□□ 1.85
PABPN1-206ENST00000556809 PXYLP1Q8TE99 480 aa26.62■■□□□ 1.85
PABPN1-206ENST00000556809 NBPF3Q9H094 633 aa26.62■■□□□ 1.85
PABPN1-206ENST00000556809 CLIP2Q9UDT6 1046 aa26.62■■□□□ 1.85
PABPN1-206ENST00000556809 SYNPO2Q9UMS6 1093 aa26.62■■□□□ 1.85
PABPN1-206ENST00000556809 F5H6K3 240 aa26.61■■□□□ 1.85
PABPN1-206ENST00000556809 MAPK4P31152 587 aa26.61■■□□□ 1.85
PABPN1-206ENST00000556809 KLRC3Q07444 240 aa26.61■■□□□ 1.85
PABPN1-206ENST00000556809 IMMTQ16891 758 aaKnown RBP26.61■■□□□ 1.85
PABPN1-206ENST00000556809 SLAIN1Q8ND83 568 aa26.61■■□□□ 1.85
PABPN1-206ENST00000556809 IL17RBQ9NRM6 502 aa26.61■■□□□ 1.85
PABPN1-206ENST00000556809 U3KPZ7 1027 aaPredicted RBP26.61■■□□□ 1.85
PABPN1-206ENST00000556809 POTEFA5A3E0 1075 aa26.6■■□□□ 1.85
PABPN1-206ENST00000556809 ADCY3O60266 1144 aa26.6■■□□□ 1.85
PABPN1-206ENST00000556809 FLOT1O75955 427 aa26.6■■□□□ 1.85
PABPN1-206ENST00000556809 TTLL1O95922 423 aa26.6■■□□□ 1.85
PABPN1-206ENST00000556809 MAP4K1Q92918 833 aa26.6■■□□□ 1.85
PABPN1-206ENST00000556809 LSG1Q9H089 658 aaKnown RBP26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms