RNA–Protein interactions for RNA: ENST00000556771.5

MTHFD1-214, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-214ENST00000556771 USP17L24Q0WX57 530 aa12.52□□□□□ -0.41
MTHFD1-214ENST00000556771 ZYXQ15942 572 aaKnown RBP12.52□□□□□ -0.41
MTHFD1-214ENST00000556771 STK11IPQ8N1F8 1099 aa12.52□□□□□ -0.41
MTHFD1-214ENST00000556771 NEDD1Q8NHV4 660 aa12.52□□□□□ -0.41
MTHFD1-214ENST00000556771 VCPKMTQ9H867 229 aa12.52□□□□□ -0.41
MTHFD1-214ENST00000556771 GOPCQ9HD26 462 aa12.52□□□□□ -0.41
MTHFD1-214ENST00000556771 CPA4Q9UI42 421 aa12.52□□□□□ -0.41
MTHFD1-214ENST00000556771 LAMA4Q16363 1823 aa12.52□□□□□ -0.41
MTHFD1-214ENST00000556771 IGKV6D-41A0A0C4DH26 115 aa12.51□□□□□ -0.41
MTHFD1-214ENST00000556771 A0A1W2PRG0 241 aa12.51□□□□□ -0.41
MTHFD1-214ENST00000556771 TSPY2A6NKD2 308 aa12.51□□□□□ -0.41
MTHFD1-214ENST00000556771 ZNF213O14771 459 aa12.51□□□□□ -0.41
MTHFD1-214ENST00000556771 SGSM2O43147 1006 aa12.51□□□□□ -0.41
MTHFD1-214ENST00000556771 PRDM1O75626 825 aa12.51□□□□□ -0.41
MTHFD1-214ENST00000556771 EEF2P13639 858 aaKnown RBP12.51□□□□□ -0.41
MTHFD1-214ENST00000556771 LACTBP83111 547 aaPredicted RBP12.51□□□□□ -0.41
MTHFD1-214ENST00000556771 CTDSPL2Q05D32 466 aa12.51□□□□□ -0.41
MTHFD1-214ENST00000556771 DGKZQ13574 1117 aa12.51□□□□□ -0.41
MTHFD1-214ENST00000556771 IMMTQ16891 758 aaKnown RBP12.51□□□□□ -0.41
MTHFD1-214ENST00000556771 FAM110CQ1W6H9 321 aa12.51□□□□□ -0.41
MTHFD1-214ENST00000556771 AKNAD1Q5T1N1 836 aa12.51□□□□□ -0.41
MTHFD1-214ENST00000556771 CASC1Q6TDU7 716 aa12.51□□□□□ -0.41
MTHFD1-214ENST00000556771 SIAH1Q8IUQ4 282 aa12.51□□□□□ -0.41
MTHFD1-214ENST00000556771 CD99L2Q8TCZ2 262 aa12.51□□□□□ -0.41
MTHFD1-214ENST00000556771 STAG1Q8WVM7 1258 aa12.51□□□□□ -0.41
MTHFD1-214ENST00000556771 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.51□□□□□ -0.41
MTHFD1-214ENST00000556771 MTMR4Q9NYA4 1195 aa12.51□□□□□ -0.41
MTHFD1-214ENST00000556771 WDR46O15213 610 aaKnown RBP12.5□□□□□ -0.41
MTHFD1-214ENST00000556771 TTLL1O95922 423 aa12.5□□□□□ -0.41
MTHFD1-214ENST00000556771 PRMT2P55345 433 aa12.5□□□□□ -0.41
MTHFD1-214ENST00000556771 HERVK_113P62684 666 aa12.5□□□□□ -0.41
MTHFD1-214ENST00000556771 TFAP4Q01664 338 aa12.5□□□□□ -0.41
MTHFD1-214ENST00000556771 ATP2B2Q01814 1243 aa12.5□□□□□ -0.41
MTHFD1-214ENST00000556771 LBX2Q6XYB7 198 aa12.5□□□□□ -0.41
MTHFD1-214ENST00000556771 CATSPERGQ6ZRH7 1159 aa12.5□□□□□ -0.41
MTHFD1-214ENST00000556771 MFSD6Q6ZSS7 791 aa12.5□□□□□ -0.41
MTHFD1-214ENST00000556771 KIAA1211Q6ZU35 1233 aa12.5□□□□□ -0.41
MTHFD1-214ENST00000556771 MKL1Q969V6 931 aa12.5□□□□□ -0.41
MTHFD1-214ENST00000556771 CEP95Q96GE4 821 aa12.5□□□□□ -0.41
MTHFD1-214ENST00000556771 MCOLN1Q9GZU1 580 aa12.5□□□□□ -0.41
MTHFD1-214ENST00000556771 RPAP3Q9H6T3 665 aaPredicted RBP12.5□□□□□ -0.41
MTHFD1-214ENST00000556771 EFCC1Q9HA90 598 aa12.5□□□□□ -0.41
MTHFD1-214ENST00000556771 MORF4L1Q9UBU8 362 aa12.5□□□□□ -0.41
MTHFD1-214ENST00000556771 MYPNQ86TC9 1320 aa12.5□□□□□ -0.41
MTHFD1-214ENST00000556771 RANBP6O60518 1105 aaKnown RBP12.49□□□□□ -0.41
MTHFD1-214ENST00000556771 HOXD10P28358 340 aa12.49□□□□□ -0.41
MTHFD1-214ENST00000556771 HAND2P61296 217 aa12.49□□□□□ -0.41
MTHFD1-214ENST00000556771 FBXO46Q6PJ61 603 aaPredicted RBP12.49□□□□□ -0.41
MTHFD1-214ENST00000556771 OTOP1Q7RTM1 612 aa12.49□□□□□ -0.41
MTHFD1-214ENST00000556771 CLEC10AQ8IUN9 316 aa12.49□□□□□ -0.41
MTHFD1-214ENST00000556771 ESR2Q92731 530 aa12.49□□□□□ -0.41
MTHFD1-214ENST00000556771 P2RX7Q99572 595 aaKnown RBP12.49□□□□□ -0.41
MTHFD1-214ENST00000556771 IL25Q9H293 177 aa12.49□□□□□ -0.41
MTHFD1-214ENST00000556771 CNNM2Q9H8M5 875 aa12.49□□□□□ -0.41
MTHFD1-214ENST00000556771 TOMM22Q9NS69 142 aa12.49□□□□□ -0.41
MTHFD1-214ENST00000556771 TCP11L1Q9NUJ3 509 aa12.49□□□□□ -0.41
MTHFD1-214ENST00000556771 HOXC10Q9NYD6 342 aa12.49□□□□□ -0.41
MTHFD1-214ENST00000556771 TRIM17Q9Y577 477 aa12.49□□□□□ -0.41
MTHFD1-214ENST00000556771 CDC45O75419 566 aa12.48□□□□□ -0.41
MTHFD1-214ENST00000556771 FCGRTP55899 365 aa12.48□□□□□ -0.41
MTHFD1-214ENST00000556771 COG2Q14746 738 aa12.48□□□□□ -0.41
MTHFD1-214ENST00000556771 CCDC178Q5BJE1 867 aa12.48□□□□□ -0.41
MTHFD1-214ENST00000556771 FAM47AQ5JRC9 791 aa12.48□□□□□ -0.41
MTHFD1-214ENST00000556771 TBC1D10CQ8IV04 446 aa12.48□□□□□ -0.41
MTHFD1-214ENST00000556771 ANKRD13CQ8N6S4 541 aa12.48□□□□□ -0.41
MTHFD1-214ENST00000556771 MB21D1Q8N884 522 aa12.48□□□□□ -0.41
MTHFD1-214ENST00000556771 GMCL1P1Q8NEA9 526 aa12.48□□□□□ -0.41
MTHFD1-214ENST00000556771 ESYT1Q9BSJ8 1104 aa12.48□□□□□ -0.41
MTHFD1-214ENST00000556771 TANGO6Q9C0B7 1094 aa12.48□□□□□ -0.41
MTHFD1-214ENST00000556771 NBPF3Q9H094 633 aa12.48□□□□□ -0.41
MTHFD1-214ENST00000556771 CLIP2Q9UDT6 1046 aa12.48□□□□□ -0.41
MTHFD1-214ENST00000556771 RABGAP1Q9Y3P9 1069 aa12.48□□□□□ -0.41
MTHFD1-214ENST00000556771 MYH4Q9Y623 1939 aa12.48□□□□□ -0.41
MTHFD1-214ENST00000556771 PSMC4P43686 418 aa12.47□□□□□ -0.41
MTHFD1-214ENST00000556771 NOVP48745 357 aa12.47□□□□□ -0.41
MTHFD1-214ENST00000556771 RRP12Q5JTH9 1297 aaKnown RBP12.47□□□□□ -0.41
MTHFD1-214ENST00000556771 SKAP1Q86WV1 359 aa12.47□□□□□ -0.41
MTHFD1-214ENST00000556771 GPRC5AQ8NFJ5 357 aa12.47□□□□□ -0.41
MTHFD1-214ENST00000556771 TTC14Q96N46 770 aa12.47□□□□□ -0.41
MTHFD1-214ENST00000556771 KRT23Q9C075 422 aa12.47□□□□□ -0.41
MTHFD1-214ENST00000556771 SPDYE16A6NNV3 312 aaPredicted RBP12.46□□□□□ -0.41
MTHFD1-214ENST00000556771 F5H6K3 240 aa12.46□□□□□ -0.41
MTHFD1-214ENST00000556771 FLOT1O75955 427 aa12.46□□□□□ -0.41
MTHFD1-214ENST00000556771 FMNL1O95466 1100 aaPredicted RBP12.46□□□□□ -0.41
MTHFD1-214ENST00000556771 NDUFB10O96000 172 aa12.46□□□□□ -0.41
MTHFD1-214ENST00000556771 CCNA1P78396 465 aa12.46□□□□□ -0.41
MTHFD1-214ENST00000556771 KLRC3Q07444 240 aa12.46□□□□□ -0.41
MTHFD1-214ENST00000556771 IQCA1Q86XH1 822 aa12.46□□□□□ -0.41
MTHFD1-214ENST00000556771 SPICE1Q8N0Z3 855 aa12.46□□□□□ -0.41
MTHFD1-214ENST00000556771 MAP4K1Q92918 833 aa12.46□□□□□ -0.41
MTHFD1-214ENST00000556771 ABHD8Q96I13 439 aa12.46□□□□□ -0.41
MTHFD1-214ENST00000556771 GMCL1Q96IK5 515 aa12.46□□□□□ -0.41
MTHFD1-214ENST00000556771 TRIM47Q96LD4 638 aa12.46□□□□□ -0.41
MTHFD1-214ENST00000556771 INCENPQ9NQS7 918 aa12.46□□□□□ -0.41
MTHFD1-214ENST00000556771 RBPJLQ9UBG7 517 aa12.46□□□□□ -0.41
MTHFD1-214ENST00000556771 STX8Q9UNK0 236 aa12.46□□□□□ -0.41
MTHFD1-214ENST00000556771 PTPN22Q9Y2R2 807 aa12.46□□□□□ -0.41
MTHFD1-214ENST00000556771 TACC3Q9Y6A5 838 aa12.46□□□□□ -0.41
MTHFD1-214ENST00000556771 MGAMO43451 1857 aa12.46□□□□□ -0.42
MTHFD1-214ENST00000556771 NEDD4P46934 1319 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms