RNA–Protein interactions for RNA: ENST00000556516.1

PCNX1-212, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-212ENST00000556516 SFRP5Q5T4F7 317 aa7.09□□□□□ -1.27
PCNX1-212ENST00000556516 NBPF12Q5TAG4 269 aaPredicted RBP7.09□□□□□ -1.27
PCNX1-212ENST00000556516 DUSP27Q5VZP5 1158 aa7.09□□□□□ -1.27
PCNX1-212ENST00000556516 MRM1Q6IN84 353 aaKnown RBP7.09□□□□□ -1.27
PCNX1-212ENST00000556516 KIAA1211LQ6NV74 962 aa7.09□□□□□ -1.27
PCNX1-212ENST00000556516 Q96M66 194 aa7.09□□□□□ -1.27
PCNX1-212ENST00000556516 HIRIP3Q9BW71 556 aaPredicted RBP7.09□□□□□ -1.27
PCNX1-212ENST00000556516 SUCOQ9UBS9 1254 aaKnown RBP7.09□□□□□ -1.27
PCNX1-212ENST00000556516 ZNF214Q9UL59 606 aaPredicted RBP7.09□□□□□ -1.27
PCNX1-212ENST00000556516 PRR19A6NJB7 356 aa7.08□□□□□ -1.28
PCNX1-212ENST00000556516 PMS1P54277 932 aaKnown RBP7.08□□□□□ -1.28
PCNX1-212ENST00000556516 RBL2Q08999 1139 aa7.08□□□□□ -1.28
PCNX1-212ENST00000556516 BMS1Q14692 1282 aaKnown RBP7.08□□□□□ -1.28
PCNX1-212ENST00000556516 DDR2Q16832 855 aa7.08□□□□□ -1.28
PCNX1-212ENST00000556516 ARHGAP27Q6ZUM4 889 aa7.08□□□□□ -1.28
PCNX1-212ENST00000556516 CCDC144CPQ8IYA2 1237 aa7.08□□□□□ -1.28
PCNX1-212ENST00000556516 PLD6Q8N2A8 252 aaKnown RBP7.08□□□□□ -1.28
PCNX1-212ENST00000556516 VWCEQ96DN2 955 aa7.08□□□□□ -1.28
PCNX1-212ENST00000556516 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.08□□□□□ -1.28
PCNX1-212ENST00000556516 MINPP1Q9UNW1 487 aa7.08□□□□□ -1.28
PCNX1-212ENST00000556516 MAPK8IP1Q9UQF2 711 aa7.08□□□□□ -1.28
PCNX1-212ENST00000556516 WASH4PA8MWX3 477 aa7.07□□□□□ -1.28
PCNX1-212ENST00000556516 GSC2O15499 205 aa7.07□□□□□ -1.28
PCNX1-212ENST00000556516 CYP26A1O43174 497 aa7.07□□□□□ -1.28
PCNX1-212ENST00000556516 CCNFP41002 786 aa7.07□□□□□ -1.28
PCNX1-212ENST00000556516 OXCT1P55809 520 aa7.07□□□□□ -1.28
PCNX1-212ENST00000556516 CYP27A1Q02318 531 aa7.07□□□□□ -1.28
PCNX1-212ENST00000556516 TNK2Q07912 1038 aa7.07□□□□□ -1.28
PCNX1-212ENST00000556516 CDKAL1Q5VV42 579 aa7.07□□□□□ -1.28
PCNX1-212ENST00000556516 DPH6Q7L8W6 267 aa7.07□□□□□ -1.28
PCNX1-212ENST00000556516 FAM178BQ8IXR5 827 aa7.07□□□□□ -1.28
PCNX1-212ENST00000556516 RNF141Q8WVD5 230 aa7.07□□□□□ -1.28
PCNX1-212ENST00000556516 ARMC5Q96C12 935 aa7.07□□□□□ -1.28
PCNX1-212ENST00000556516 LGR4Q9BXB1 951 aa7.07□□□□□ -1.28
PCNX1-212ENST00000556516 PHAXQ9H814 394 aaKnown RBP7.07□□□□□ -1.28
PCNX1-212ENST00000556516 GTF2IRD1Q9UHL9 959 aa7.07□□□□□ -1.28
PCNX1-212ENST00000556516 LEMD3Q9Y2U8 911 aa7.07□□□□□ -1.28
PCNX1-212ENST00000556516 SHISA3A0PJX4 238 aa7.06□□□□□ -1.28
PCNX1-212ENST00000556516 GNAT3A8MTJ3 354 aa7.06□□□□□ -1.28
PCNX1-212ENST00000556516 SLC7A5Q01650 507 aa7.06□□□□□ -1.28
PCNX1-212ENST00000556516 SERINC3Q13530 473 aa7.06□□□□□ -1.28
PCNX1-212ENST00000556516 FXNQ16595 210 aa7.06□□□□□ -1.28
PCNX1-212ENST00000556516 CCDC144BQ3MJ40 725 aa7.06□□□□□ -1.28
PCNX1-212ENST00000556516 ZNF746Q6NUN9 644 aaPredicted RBP7.06□□□□□ -1.28
PCNX1-212ENST00000556516 TMC3Q7Z5M5 1100 aa7.06□□□□□ -1.28
PCNX1-212ENST00000556516 MFSD4AQ8N468 514 aa7.06□□□□□ -1.28
PCNX1-212ENST00000556516 DTWD2Q8NBA8 298 aa7.06□□□□□ -1.28
PCNX1-212ENST00000556516 DHRS1Q96LJ7 313 aa7.06□□□□□ -1.28
PCNX1-212ENST00000556516 FGD4Q96M96 766 aa7.06□□□□□ -1.28
PCNX1-212ENST00000556516 METTL22Q9BUU2 404 aaPredicted RBP7.06□□□□□ -1.28
PCNX1-212ENST00000556516 PIM2Q9P1W9 311 aa7.06□□□□□ -1.28
PCNX1-212ENST00000556516 ZC3H7BQ9UGR2 993 aaKnown RBP7.06□□□□□ -1.28
PCNX1-212ENST00000556516 PLAGL2Q9UPG8 496 aa7.06□□□□□ -1.28
PCNX1-212ENST00000556516 CAPN6Q9Y6Q1 641 aa7.06□□□□□ -1.28
PCNX1-212ENST00000556516 FAM221BA6H8Z2 402 aa7.05□□□□□ -1.28
PCNX1-212ENST00000556516 FAM155AB1AL88 458 aaPredicted RBP7.05□□□□□ -1.28
PCNX1-212ENST00000556516 MEIS1O00470 390 aa7.05□□□□□ -1.28
PCNX1-212ENST00000556516 SHOXO15266 292 aa7.05□□□□□ -1.28
PCNX1-212ENST00000556516 CBFA2T2O43439 604 aa7.05□□□□□ -1.28
PCNX1-212ENST00000556516 EPHX1P07099 455 aa7.05□□□□□ -1.28
PCNX1-212ENST00000556516 CYP7A1P22680 504 aa7.05□□□□□ -1.28
PCNX1-212ENST00000556516 NKPD1Q17RQ9 610 aa7.05□□□□□ -1.28
PCNX1-212ENST00000556516 ADCY4Q8NFM4 1077 aa7.05□□□□□ -1.28
PCNX1-212ENST00000556516 ASPNQ9BXN1 380 aa7.05□□□□□ -1.28
PCNX1-212ENST00000556516 OSBPL2Q9H1P3 480 aa7.05□□□□□ -1.28
PCNX1-212ENST00000556516 PIF1Q9H611 641 aa7.05□□□□□ -1.28
PCNX1-212ENST00000556516 ZSWIM4Q9H7M6 989 aa7.05□□□□□ -1.28
PCNX1-212ENST00000556516 FBXL21Q9UKT6 434 aa7.05□□□□□ -1.28
PCNX1-212ENST00000556516 ZNF451Q9Y4E5 1061 aa7.05□□□□□ -1.28
PCNX1-212ENST00000556516 SLC12A7Q9Y666 1083 aa7.05□□□□□ -1.28
PCNX1-212ENST00000556516 K7ELQ4 463 aaPredicted RBP7.04□□□□□ -1.28
PCNX1-212ENST00000556516 U2SURPO15042 1029 aaKnown RBP7.04□□□□□ -1.28
PCNX1-212ENST00000556516 CEACAM5P06731 702 aa7.04□□□□□ -1.28
PCNX1-212ENST00000556516 CD96P40200 585 aa7.04□□□□□ -1.28
PCNX1-212ENST00000556516 SPACA3Q8IXA5 215 aa7.04□□□□□ -1.28
PCNX1-212ENST00000556516 BRF1Q92994 677 aa7.04□□□□□ -1.28
PCNX1-212ENST00000556516 HAUS7Q99871 368 aa7.04□□□□□ -1.28
PCNX1-212ENST00000556516 PRDM14Q9GZV8 571 aa7.04□□□□□ -1.28
PCNX1-212ENST00000556516 GFOD1Q9NXC2 390 aa7.04□□□□□ -1.28
PCNX1-212ENST00000556516 H3BS24 57 aa7.03□□□□□ -1.28
PCNX1-212ENST00000556516 IGF2BP3O00425 579 aaKnown RBP eCLIP7.03□□□□□ -1.28
PCNX1-212ENST00000556516 ZNF865P0CJ78 1059 aaPredicted RBP7.03□□□□□ -1.28
PCNX1-212ENST00000556516 RNF4P78317 190 aa7.03□□□□□ -1.28
PCNX1-212ENST00000556516 AUHQ13825 339 aaKnown RBP7.03□□□□□ -1.28
PCNX1-212ENST00000556516 NBPF9Q3BBW0 867 aa7.03□□□□□ -1.28
PCNX1-212ENST00000556516 FBXL18Q96ME1 805 aa7.03□□□□□ -1.28
PCNX1-212ENST00000556516 HSPA12BQ96MM6 686 aa7.03□□□□□ -1.28
PCNX1-212ENST00000556516 APEX2Q9UBZ4 518 aa7.03□□□□□ -1.28
PCNX1-212ENST00000556516 SUSD2Q9UGT4 822 aa7.03□□□□□ -1.28
PCNX1-212ENST00000556516 MED26O95402 600 aa7.02□□□□□ -1.29
PCNX1-212ENST00000556516 FOSL1P15407 271 aa7.02□□□□□ -1.29
PCNX1-212ENST00000556516 SSTR4P31391 388 aa7.02□□□□□ -1.29
PCNX1-212ENST00000556516 RASA3Q14644 834 aa7.02□□□□□ -1.29
PCNX1-212ENST00000556516 C7orf61Q8IZ16 206 aa7.02□□□□□ -1.29
PCNX1-212ENST00000556516 PPP1R14AQ96A00 147 aa7.02□□□□□ -1.29
PCNX1-212ENST00000556516 SRPK1Q96SB4 655 aaKnown RBP7.02□□□□□ -1.29
PCNX1-212ENST00000556516 SNTG2Q9NY99 539 aa7.02□□□□□ -1.29
PCNX1-212ENST00000556516 PCDHB12Q9Y5F1 795 aa7.02□□□□□ -1.29
PCNX1-212ENST00000556516 SUSD5O60279 629 aa7.01□□□□□ -1.29
PCNX1-212ENST00000556516 PRAMEF1O95521 474 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms