RNA–Protein interactions for RNA: ENST00000556330.5

SRSF5-213, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 2

Gene SRSF5, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-213ENST00000556330 SYAP1Q96A49 352 aaPredicted RBP11.08□□□□□ -0.64
SRSF5-213ENST00000556330 DDX11Q96FC9 970 aa11.08□□□□□ -0.64
SRSF5-213ENST00000556330 DDX27Q96GQ7 796 aaKnown RBP11.08□□□□□ -0.64
SRSF5-213ENST00000556330 ALG1Q9BT22 464 aa11.08□□□□□ -0.64
SRSF5-213ENST00000556330 BRMS1Q9HCU9 246 aa11.08□□□□□ -0.64
SRSF5-213ENST00000556330 INCENPQ9NQS7 918 aa11.08□□□□□ -0.64
SRSF5-213ENST00000556330 GPHNQ9NQX3 736 aaPredicted RBP11.08□□□□□ -0.64
SRSF5-213ENST00000556330 GINM1Q9NU53 330 aa11.08□□□□□ -0.64
SRSF5-213ENST00000556330 CDK5RAP2Q96SN8 1893 aa11.08□□□□□ -0.64
SRSF5-213ENST00000556330 hCG_1984214I3L0E3 225 aa11.07□□□□□ -0.64
SRSF5-213ENST00000556330 PRPF3O43395 683 aaKnown RBP11.07□□□□□ -0.64
SRSF5-213ENST00000556330 TBC1D12O60347 775 aa11.07□□□□□ -0.64
SRSF5-213ENST00000556330 TATDN1Q6P1N9 297 aa11.07□□□□□ -0.64
SRSF5-213ENST00000556330 MAMSTRQ6ZN01 415 aa11.07□□□□□ -0.64
SRSF5-213ENST00000556330 TMEM179Q6ZVK1 233 aa11.07□□□□□ -0.64
SRSF5-213ENST00000556330 TMTC3Q6ZXV5 915 aa11.07□□□□□ -0.64
SRSF5-213ENST00000556330 STK11IPQ8N1F8 1099 aa11.07□□□□□ -0.64
SRSF5-213ENST00000556330 ZNF713Q8N859 430 aaPredicted RBP11.07□□□□□ -0.64
SRSF5-213ENST00000556330 DYNLL2Q96FJ2 89 aa11.07□□□□□ -0.64
SRSF5-213ENST00000556330 KANSL2Q9H9L4 492 aa11.07□□□□□ -0.64
SRSF5-213ENST00000556330 MYOZ2Q9NPC6 264 aa11.07□□□□□ -0.64
SRSF5-213ENST00000556330 DDX4Q9NQI0 724 aaKnown RBP11.07□□□□□ -0.64
SRSF5-213ENST00000556330 FAM198AQ9UFP1 575 aa11.07□□□□□ -0.64
SRSF5-213ENST00000556330 ISY1Q9ULR0 285 aaKnown RBP11.07□□□□□ -0.64
SRSF5-213ENST00000556330 STX8Q9UNK0 236 aa11.07□□□□□ -0.64
SRSF5-213ENST00000556330 H7C1D1 291 aa11.06□□□□□ -0.64
SRSF5-213ENST00000556330 TRAK2O60296 914 aa11.06□□□□□ -0.64
SRSF5-213ENST00000556330 FDPSP14324 419 aaKnown RBP11.06□□□□□ -0.64
SRSF5-213ENST00000556330 CDC27P30260 824 aa11.06□□□□□ -0.64
SRSF5-213ENST00000556330 NFIAQ12857 509 aa11.06□□□□□ -0.64
SRSF5-213ENST00000556330 GNL2Q13823 731 aaKnown RBP11.06□□□□□ -0.64
SRSF5-213ENST00000556330 GRM4Q14833 912 aa11.06□□□□□ -0.64
SRSF5-213ENST00000556330 CERKLQ49MI3 558 aaPredicted RBP11.06□□□□□ -0.64
SRSF5-213ENST00000556330 ASPRV1Q53RT3 343 aa11.06□□□□□ -0.64
SRSF5-213ENST00000556330 GPATCH4Q5T3I0 446 aaKnown RBP11.06□□□□□ -0.64
SRSF5-213ENST00000556330 RCSD1Q6JBY9 416 aa11.06□□□□□ -0.64
SRSF5-213ENST00000556330 CDC37L1Q7L3B6 337 aa11.06□□□□□ -0.64
SRSF5-213ENST00000556330 GPC2Q8N158 579 aa11.06□□□□□ -0.64
SRSF5-213ENST00000556330 CCDC12Q8WUD4 166 aaPredicted RBP11.06□□□□□ -0.64
SRSF5-213ENST00000556330 ZBED3Q96IU2 234 aaPredicted RBP11.06□□□□□ -0.64
SRSF5-213ENST00000556330 PRMT6Q96LA8 375 aaPredicted RBP11.06□□□□□ -0.64
SRSF5-213ENST00000556330 SLC26A6Q9BXS9 759 aa11.06□□□□□ -0.64
SRSF5-213ENST00000556330 TDRD3Q9H7E2 651 aaKnown RBP11.06□□□□□ -0.64
SRSF5-213ENST00000556330 CABP5Q9NP86 173 aa11.06□□□□□ -0.64
SRSF5-213ENST00000556330 SCUBE2Q9NQ36 999 aa11.06□□□□□ -0.64
SRSF5-213ENST00000556330 SH3GLB2Q9NR46 395 aa11.06□□□□□ -0.64
SRSF5-213ENST00000556330 IL17RBQ9NRM6 502 aa11.06□□□□□ -0.64
SRSF5-213ENST00000556330 FAM217BQ9NTX9 383 aaPredicted RBP11.06□□□□□ -0.64
SRSF5-213ENST00000556330 MTMR4Q9NYA4 1195 aa11.06□□□□□ -0.64
SRSF5-213ENST00000556330 ZNF70Q9UC06 446 aaPredicted RBP11.06□□□□□ -0.64
SRSF5-213ENST00000556330 ZC3H4Q9UPT8 1303 aaKnown RBP11.06□□□□□ -0.64
SRSF5-213ENST00000556330 IGKV6D-41A0A0C4DH26 115 aa11.05□□□□□ -0.64
SRSF5-213ENST00000556330 PARP1P09874 1014 aaKnown RBP11.05□□□□□ -0.64
SRSF5-213ENST00000556330 CALML3P27482 149 aa11.05□□□□□ -0.64
SRSF5-213ENST00000556330 SHMT1P34896 483 aa11.05□□□□□ -0.64
SRSF5-213ENST00000556330 UBE2HP62256 183 aa11.05□□□□□ -0.64
SRSF5-213ENST00000556330 RESTQ13127 1097 aa11.05□□□□□ -0.64
SRSF5-213ENST00000556330 GALNT17Q6IS24 598 aa11.05□□□□□ -0.64
SRSF5-213ENST00000556330 TEX2Q8IWB9 1127 aa11.05□□□□□ -0.64
SRSF5-213ENST00000556330 NLGN2Q8NFZ4 835 aa11.05□□□□□ -0.64
SRSF5-213ENST00000556330 CEP95Q96GE4 821 aa11.05□□□□□ -0.64
SRSF5-213ENST00000556330 CSRNP1Q96S65 589 aa11.05□□□□□ -0.64
SRSF5-213ENST00000556330 TMEM47Q9BQJ4 181 aa11.05□□□□□ -0.64
SRSF5-213ENST00000556330 SPZ1Q9BXG8 430 aa11.05□□□□□ -0.64
SRSF5-213ENST00000556330 FHDC1Q9C0D6 1143 aaPredicted RBP11.05□□□□□ -0.64
SRSF5-213ENST00000556330 FOXP1Q9H334 677 aaPredicted RBP11.05□□□□□ -0.64
SRSF5-213ENST00000556330 SH2D4AQ9H788 454 aa11.05□□□□□ -0.64
SRSF5-213ENST00000556330 PPP2R3BQ9Y5P8 575 aa11.05□□□□□ -0.64
SRSF5-213ENST00000556330 DDX49Q9Y6V7 483 aaKnown RBP11.05□□□□□ -0.64
SRSF5-213ENST00000556330 COL4A5P29400 1685 aa11.04□□□□□ -0.64
SRSF5-213ENST00000556330 GOLGA6L4A6NEF3 574 aa11.04□□□□□ -0.64
SRSF5-213ENST00000556330 TRAF1Q13077 416 aa11.04□□□□□ -0.64
SRSF5-213ENST00000556330 MFSD10Q14728 455 aa11.04□□□□□ -0.64
SRSF5-213ENST00000556330 RBM26Q5T8P6 1007 aaKnown RBP11.04□□□□□ -0.64
SRSF5-213ENST00000556330 ARHGAP27Q6ZUM4 889 aa11.04□□□□□ -0.64
SRSF5-213ENST00000556330 NBPF11Q86T75 865 aa11.04□□□□□ -0.64
SRSF5-213ENST00000556330 APOBEC3FQ8IUX4 373 aaKnown RBP11.04□□□□□ -0.64
SRSF5-213ENST00000556330 CCDC144CPQ8IYA2 1237 aa11.04□□□□□ -0.64
SRSF5-213ENST00000556330 JMYQ8N9B5 988 aa11.04□□□□□ -0.64
SRSF5-213ENST00000556330 SLC44A5Q8NCS7 719 aa11.04□□□□□ -0.64
SRSF5-213ENST00000556330 CCDC148Q8NFR7 591 aa11.04□□□□□ -0.64
SRSF5-213ENST00000556330 MKL1Q969V6 931 aa11.04□□□□□ -0.64
SRSF5-213ENST00000556330 MYL10Q9BUA6 226 aa11.04□□□□□ -0.64
SRSF5-213ENST00000556330 SENP2Q9HC62 589 aa11.04□□□□□ -0.64
SRSF5-213ENST00000556330 LMBRD1Q9NUN5 540 aa11.04□□□□□ -0.64
SRSF5-213ENST00000556330 NYAP2Q9P242 653 aa11.04□□□□□ -0.64
SRSF5-213ENST00000556330 PALM3A6NDB9 673 aaPredicted RBP11.03□□□□□ -0.64
SRSF5-213ENST00000556330 MPHOSPH10O00566 681 aaKnown RBP11.03□□□□□ -0.64
SRSF5-213ENST00000556330 WNT10BO00744 389 aa11.03□□□□□ -0.64
SRSF5-213ENST00000556330 PRPF40AO75400 957 aaKnown RBP11.03□□□□□ -0.64
SRSF5-213ENST00000556330 LETM1O95202 739 aaPredicted RBP11.03□□□□□ -0.64
SRSF5-213ENST00000556330 MMP1P03956 469 aa11.03□□□□□ -0.64
SRSF5-213ENST00000556330 RXRAP19793 462 aa11.03□□□□□ -0.64
SRSF5-213ENST00000556330 U2AF2P26368 475 aaKnown RBP eCLIP11.03□□□□□ -0.642e-15■■□□□ 13.9
SRSF5-213ENST00000556330 TCP10Q12799 353 aa11.03□□□□□ -0.64
SRSF5-213ENST00000556330 ABCB5Q2M3G0 1257 aa11.03□□□□□ -0.64
SRSF5-213ENST00000556330 SLC4A8Q2Y0W8 1093 aa11.03□□□□□ -0.64
SRSF5-213ENST00000556330 FOXD4L5Q5VV16 416 aaPredicted RBP11.03□□□□□ -0.64
SRSF5-213ENST00000556330 NKX2-3Q8TAU0 364 aa11.03□□□□□ -0.64
SRSF5-213ENST00000556330 KCNG4Q8TDN1 519 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms