RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 TMEM266Q2M3C6 531 aa16.77■□□□□ 0.27
NEK9-209ENST00000556170 GOLGA6L1Q8N7Z2 621 aa16.77■□□□□ 0.27
NEK9-209ENST00000556170 ARHGEF1Q92888 912 aaKnown RBP16.77■□□□□ 0.27
NEK9-209ENST00000556170 PPP1R13BQ96KQ4 1090 aa16.77■□□□□ 0.27
NEK9-209ENST00000556170 DRC1Q96MC2 740 aa16.77■□□□□ 0.27
NEK9-209ENST00000556170 CTAGE1Q96RT6 745 aa16.77■□□□□ 0.27
NEK9-209ENST00000556170 RMND1Q9NWS8 449 aa16.77■□□□□ 0.27
NEK9-209ENST00000556170 GUCA1BQ9UMX6 200 aa16.77■□□□□ 0.27
NEK9-209ENST00000556170 FGFR2P21802 821 aa16.76■□□□□ 0.27
NEK9-209ENST00000556170 CDC25BP30305 580 aa16.76■□□□□ 0.27
NEK9-209ENST00000556170 ZNF76P36508 570 aa16.76■□□□□ 0.27
NEK9-209ENST00000556170 NKX2-3Q8TAU0 364 aa16.76■□□□□ 0.27
NEK9-209ENST00000556170 FOXP2O15409 715 aa16.76■□□□□ 0.27
NEK9-209ENST00000556170 GPS2Q13227 327 aa16.76■□□□□ 0.27
NEK9-209ENST00000556170 DOK7Q18PE1 504 aa16.76■□□□□ 0.27
NEK9-209ENST00000556170 TAF3Q5VWG9 929 aa16.76■□□□□ 0.27
NEK9-209ENST00000556170 LRRC47Q8N1G4 583 aaKnown RBP16.76■□□□□ 0.27
NEK9-209ENST00000556170 VGLL2Q8N8G2 317 aa16.76■□□□□ 0.27
NEK9-209ENST00000556170 SRPRBQ9Y5M8 271 aaKnown RBP16.76■□□□□ 0.27
NEK9-209ENST00000556170 SPATA31A1Q5TZJ5 1347 aa16.76■□□□□ 0.27
NEK9-209ENST00000556170 USP17L2Q6R6M4 530 aa16.76■□□□□ 0.27
NEK9-209ENST00000556170 DYMQ7RTS9 669 aa16.76■□□□□ 0.27
NEK9-209ENST00000556170 SH3RF3Q8TEJ3 882 aaPredicted RBP16.76■□□□□ 0.27
NEK9-209ENST00000556170 ARHGAP6O43182 974 aa16.75■□□□□ 0.27
NEK9-209ENST00000556170 WWC2Q6AWC2 1192 aa16.75■□□□□ 0.27
NEK9-209ENST00000556170 DNAJC5Q9H3Z4 198 aa16.75■□□□□ 0.27
NEK9-209ENST00000556170 SLIT3O75094 1523 aa16.75■□□□□ 0.27
NEK9-209ENST00000556170 DCCP43146 1447 aa16.75■□□□□ 0.27
NEK9-209ENST00000556170 WDR19Q8NEZ3 1342 aa16.75■□□□□ 0.27
NEK9-209ENST00000556170 IKBKBO14920 756 aa16.75■□□□□ 0.27
NEK9-209ENST00000556170 RAD51AP2Q09MP3 1159 aa16.75■□□□□ 0.27
NEK9-209ENST00000556170 ERO1AQ96HE7 468 aa16.75■□□□□ 0.27
NEK9-209ENST00000556170 ZNF512BQ96KM6 892 aaPredicted RBP16.75■□□□□ 0.27
NEK9-209ENST00000556170 MED1Q15648 1581 aaPredicted RBP16.75■□□□□ 0.27
NEK9-209ENST00000556170 SMCO2A6NFE2 343 aa16.75■□□□□ 0.27
NEK9-209ENST00000556170 KRT9P35527 623 aa16.75■□□□□ 0.27
NEK9-209ENST00000556170 ETF1P62495 437 aaKnown RBP16.75■□□□□ 0.27
NEK9-209ENST00000556170 FKBP15Q5T1M5 1219 aa16.75■□□□□ 0.27
NEK9-209ENST00000556170 TXNRD3Q86VQ6 643 aa16.75■□□□□ 0.27
NEK9-209ENST00000556170 NELFBQ8WX92 580 aa16.75■□□□□ 0.27
NEK9-209ENST00000556170 TCRBV5S4A2TA0A5A2 114 aa16.74■□□□□ 0.27
NEK9-209ENST00000556170 PDE4DQ08499 809 aa16.74■□□□□ 0.27
NEK9-209ENST00000556170 PAK1Q13153 545 aa16.74■□□□□ 0.27
NEK9-209ENST00000556170 HSP90B2PQ58FF3 399 aa16.74■□□□□ 0.27
NEK9-209ENST00000556170 PTF1AQ7RTS3 328 aa16.74■□□□□ 0.27
NEK9-209ENST00000556170 GNA11P29992 359 aa16.74■□□□□ 0.27
NEK9-209ENST00000556170 EVCP57679 992 aa16.74■□□□□ 0.27
NEK9-209ENST00000556170 ARMCX5Q6P1M9 558 aa16.74■□□□□ 0.27
NEK9-209ENST00000556170 CACNA2D4Q7Z3S7 1137 aa16.74■□□□□ 0.27
NEK9-209ENST00000556170 PRPF3O43395 683 aaKnown RBP16.74■□□□□ 0.27
NEK9-209ENST00000556170 FAM193AP78312 1265 aa16.74■□□□□ 0.27
NEK9-209ENST00000556170 TDRD12Q587J7 1177 aaKnown RBP16.74■□□□□ 0.27
NEK9-209ENST00000556170 RBM43Q6ZSC3 357 aaKnown RBP16.74■□□□□ 0.27
NEK9-209ENST00000556170 NSUN4Q96CB9 384 aaKnown RBP16.74■□□□□ 0.27
NEK9-209ENST00000556170 RAB34Q9BZG1 259 aa16.74■□□□□ 0.27
NEK9-209ENST00000556170 MMRN2Q9H8L6 949 aa16.74■□□□□ 0.27
NEK9-209ENST00000556170 RPS6KA4O75676 772 aa16.73■□□□□ 0.27
NEK9-209ENST00000556170 TECP42680 631 aa16.73■□□□□ 0.27
NEK9-209ENST00000556170 SPAG1Q07617 926 aa16.73■□□□□ 0.27
NEK9-209ENST00000556170 NTRK3Q16288 839 aa16.73■□□□□ 0.27
NEK9-209ENST00000556170 NARFQ9UHQ1 456 aa16.73■□□□□ 0.27
NEK9-209ENST00000556170 PPP2R2CQ9Y2T4 447 aa16.73■□□□□ 0.27
NEK9-209ENST00000556170 SALL1Q9NSC2 1324 aa16.73■□□□□ 0.27
NEK9-209ENST00000556170 HLA-DOAP06340 250 aa16.73■□□□□ 0.27
NEK9-209ENST00000556170 SLFN14P0C7P3 912 aa16.73■□□□□ 0.27
NEK9-209ENST00000556170 CCDC70Q6NSX1 233 aa16.73■□□□□ 0.27
NEK9-209ENST00000556170 TMTC3Q6ZXV5 915 aa16.73■□□□□ 0.27
NEK9-209ENST00000556170 STAG2Q8N3U4 1231 aa16.73■□□□□ 0.27
NEK9-209ENST00000556170 SRBD1Q8N5C6 995 aaKnown RBP16.73■□□□□ 0.27
NEK9-209ENST00000556170 ZNF397Q8NF99 534 aaPredicted RBP16.73■□□□□ 0.27
NEK9-209ENST00000556170 SLF1Q9BQI6 1058 aa16.73■□□□□ 0.27
NEK9-209ENST00000556170 GOLGA6L9A6NEM1 432 aa16.73■□□□□ 0.27
NEK9-209ENST00000556170 DDAH1O94760 285 aa16.73■□□□□ 0.27
NEK9-209ENST00000556170 AMPD3Q01432 767 aa16.73■□□□□ 0.27
NEK9-209ENST00000556170 NFIXQ14938 502 aa16.73■□□□□ 0.27
NEK9-209ENST00000556170 PYM1Q9BRP8 204 aaKnown RBP16.73■□□□□ 0.27
NEK9-209ENST00000556170 THRAP3Q9Y2W1 955 aaKnown RBP16.73■□□□□ 0.27
NEK9-209ENST00000556170 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.73■□□□□ 0.27
NEK9-209ENST00000556170 PNPLA7Q6ZV29 1317 aa16.73■□□□□ 0.27
NEK9-209ENST00000556170 MSL1Q68DK7 614 aa16.72■□□□□ 0.27
NEK9-209ENST00000556170 SRRTQ9BXP5 876 aaKnown RBP16.72■□□□□ 0.27
NEK9-209ENST00000556170 FAM217BQ9NTX9 383 aaPredicted RBP16.72■□□□□ 0.27
NEK9-209ENST00000556170 BCL9O00512 1426 aa16.72■□□□□ 0.27
NEK9-209ENST00000556170 PP2D1A8MPX8 630 aa16.72■□□□□ 0.27
NEK9-209ENST00000556170 MATR3P43243 847 aaKnown RBP eCLIP16.72■□□□□ 0.27
NEK9-209ENST00000556170 PLCD1P51178 756 aa16.72■□□□□ 0.27
NEK9-209ENST00000556170 EVX2Q03828 476 aa16.72■□□□□ 0.27
NEK9-209ENST00000556170 MCM6Q14566 821 aa16.72■□□□□ 0.27
NEK9-209ENST00000556170 CSGALNACT2Q8N6G5 542 aa16.72■□□□□ 0.27
NEK9-209ENST00000556170 PAGE5Q96GU1 130 aa16.72■□□□□ 0.27
NEK9-209ENST00000556170 RBM17Q96I25 401 aaKnown RBP16.72■□□□□ 0.27
NEK9-209ENST00000556170 BRIP1Q9BX63 1249 aa16.72■□□□□ 0.27
NEK9-209ENST00000556170 RHOXF2BP0C7M4 288 aa16.72■□□□□ 0.27
NEK9-209ENST00000556170 PLCG2P16885 1265 aa16.72■□□□□ 0.27
NEK9-209ENST00000556170 ARID5AQ03989 594 aa16.72■□□□□ 0.27
NEK9-209ENST00000556170 PTPAQ15257 358 aa16.72■□□□□ 0.27
NEK9-209ENST00000556170 SPA17Q15506 151 aa16.72■□□□□ 0.27
NEK9-209ENST00000556170 RHOXF2Q9BQY4 288 aa16.72■□□□□ 0.27
NEK9-209ENST00000556170 LUC7L2Q9Y383 392 aaKnown RBP16.72■□□□□ 0.27
NEK9-209ENST00000556170 TBC1D8BQ0IIM8 1120 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms