RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 ARMT1Q9H993 441 aa9.37□□□□□ -0.91
PTCSC3-201ENST00000556013 KANSL2Q9H9L4 492 aa9.37□□□□□ -0.91
PTCSC3-201ENST00000556013 ARHGEF10LQ9HCE6 1279 aa9.37□□□□□ -0.91
PTCSC3-201ENST00000556013 CWC22Q9HCG8 908 aaKnown RBP9.37□□□□□ -0.91
PTCSC3-201ENST00000556013 ECHDC1Q9NTX5 307 aa9.37□□□□□ -0.91
PTCSC3-201ENST00000556013 SLC5A4Q9NY91 659 aa9.37□□□□□ -0.91
PTCSC3-201ENST00000556013 RBM27Q9P2N5 1060 aaKnown RBP9.37□□□□□ -0.91
PTCSC3-201ENST00000556013 ADAMTS5Q9UNA0 930 aa9.37□□□□□ -0.91
PTCSC3-201ENST00000556013 APBB1O00213 710 aa9.36□□□□□ -0.91
PTCSC3-201ENST00000556013 MPHOSPH10O00566 681 aaKnown RBP9.36□□□□□ -0.91
PTCSC3-201ENST00000556013 WDR46O15213 610 aaKnown RBP9.36□□□□□ -0.91
PTCSC3-201ENST00000556013 ZFYP08048 801 aaPredicted RBP9.36□□□□□ -0.91
PTCSC3-201ENST00000556013 COL6A1P12109 1028 aa9.36□□□□□ -0.91
PTCSC3-201ENST00000556013 TRIM32Q13049 653 aa9.36□□□□□ -0.91
PTCSC3-201ENST00000556013 OLFML2BQ68BL8 750 aa9.36□□□□□ -0.91
PTCSC3-201ENST00000556013 GPR153Q6NV75 609 aa9.36□□□□□ -0.91
PTCSC3-201ENST00000556013 SIAH1Q8IUQ4 282 aa9.36□□□□□ -0.91
PTCSC3-201ENST00000556013 KBTBD3Q8NAB2 608 aa9.36□□□□□ -0.91
PTCSC3-201ENST00000556013 GDF15Q99988 308 aa9.36□□□□□ -0.91
PTCSC3-201ENST00000556013 BTBD7Q9P203 1132 aa9.36□□□□□ -0.91
PTCSC3-201ENST00000556013 TRIOBPQ9H2D6 2365 aa9.35□□□□□ -0.91
PTCSC3-201ENST00000556013 PRKAB2O43741 272 aa9.35□□□□□ -0.91
PTCSC3-201ENST00000556013 MBD4O95243 580 aa9.35□□□□□ -0.91
PTCSC3-201ENST00000556013 SLC25A27O95847 323 aa9.35□□□□□ -0.91
PTCSC3-201ENST00000556013 GNAT2P19087 354 aa9.35□□□□□ -0.91
PTCSC3-201ENST00000556013 ATP2B2Q01814 1243 aa9.35□□□□□ -0.91
PTCSC3-201ENST00000556013 ICA1Q05084 483 aa9.35□□□□□ -0.91
PTCSC3-201ENST00000556013 ZYXQ15942 572 aaKnown RBP9.35□□□□□ -0.91
PTCSC3-201ENST00000556013 CTR9Q6PD62 1173 aa9.35□□□□□ -0.91
PTCSC3-201ENST00000556013 GPATCH3Q96I76 525 aa9.35□□□□□ -0.91
PTCSC3-201ENST00000556013 STRBPQ96SI9 672 aaKnown RBP9.35□□□□□ -0.91
PTCSC3-201ENST00000556013 MOV10L1Q9BXT6 1211 aaKnown RBP9.35□□□□□ -0.91
PTCSC3-201ENST00000556013 SPATC1LQ9H0A9 340 aa9.35□□□□□ -0.91
PTCSC3-201ENST00000556013 PUS7LQ9H0K6 701 aaKnown RBP9.35□□□□□ -0.91
PTCSC3-201ENST00000556013 ZNF287Q9HBT7 754 aa9.35□□□□□ -0.91
PTCSC3-201ENST00000556013 ARPP21Q9UBL0 812 aaPredicted RBP9.35□□□□□ -0.91
PTCSC3-201ENST00000556013 NRBP1Q9UHY1 535 aa9.35□□□□□ -0.91
PTCSC3-201ENST00000556013 SYNPO2Q9UMS6 1093 aa9.35□□□□□ -0.91
PTCSC3-201ENST00000556013 DIS3Q9Y2L1 958 aaKnown RBP9.35□□□□□ -0.91
PTCSC3-201ENST00000556013 SLC4A4Q9Y6R1 1079 aa9.35□□□□□ -0.91
PTCSC3-201ENST00000556013 PEX10O60683 326 aa9.34□□□□□ -0.91
PTCSC3-201ENST00000556013 AKR1B1P15121 316 aa9.34□□□□□ -0.91
PTCSC3-201ENST00000556013 COPB2P35606 906 aa9.34□□□□□ -0.91
PTCSC3-201ENST00000556013 CCL14Q16627 93 aa9.34□□□□□ -0.91
PTCSC3-201ENST00000556013 DPP9Q86TI2 863 aa9.34□□□□□ -0.91
PTCSC3-201ENST00000556013 TICAM2Q86XR7 235 aa9.34□□□□□ -0.91
PTCSC3-201ENST00000556013 APPBP2Q92624 585 aa9.34□□□□□ -0.91
PTCSC3-201ENST00000556013 DYNLL2Q96FJ2 89 aa9.34□□□□□ -0.91
PTCSC3-201ENST00000556013 NYAP2Q9P242 653 aa9.34□□□□□ -0.91
PTCSC3-201ENST00000556013 DDX20Q9UHI6 824 aaKnown RBP9.34□□□□□ -0.91
PTCSC3-201ENST00000556013 TTC41PQ6P2S7 1318 aa9.33□□□□□ -0.92
PTCSC3-201ENST00000556013 GSG1L2A8MUP6 293 aa9.33□□□□□ -0.92
PTCSC3-201ENST00000556013 PATL2C9JE40 543 aaKnown RBP9.33□□□□□ -0.92
PTCSC3-201ENST00000556013 ERC2O15083 957 aa9.33□□□□□ -0.92
PTCSC3-201ENST00000556013 RNF113AO15541 343 aaKnown RBP9.33□□□□□ -0.92
PTCSC3-201ENST00000556013 FLOT1O75955 427 aa9.33□□□□□ -0.92
PTCSC3-201ENST00000556013 CYP2D6P10635 497 aa9.33□□□□□ -0.92
PTCSC3-201ENST00000556013 EEF2P13639 858 aaKnown RBP9.33□□□□□ -0.92
PTCSC3-201ENST00000556013 ERCC3P19447 782 aa9.33□□□□□ -0.92
PTCSC3-201ENST00000556013 CCND3P30281 292 aaPredicted RBP9.33□□□□□ -0.92
PTCSC3-201ENST00000556013 C20orf194Q5TEA3 1177 aa9.33□□□□□ -0.92
PTCSC3-201ENST00000556013 WDR78Q5VTH9 848 aa9.33□□□□□ -0.92
PTCSC3-201ENST00000556013 RIOX2Q8IUF8 465 aa9.33□□□□□ -0.92
PTCSC3-201ENST00000556013 SLC44A5Q8NCS7 719 aa9.33□□□□□ -0.92
PTCSC3-201ENST00000556013 ARRDC4Q8NCT1 418 aa9.33□□□□□ -0.92
PTCSC3-201ENST00000556013 NPLOC4Q8TAT6 608 aa9.33□□□□□ -0.92
PTCSC3-201ENST00000556013 DIS3LQ8TF46 1054 aaKnown RBP9.33□□□□□ -0.92
PTCSC3-201ENST00000556013 MKL1Q969V6 931 aa9.33□□□□□ -0.92
PTCSC3-201ENST00000556013 TANGO6Q9C0B7 1094 aa9.33□□□□□ -0.92
PTCSC3-201ENST00000556013 GOPCQ9HD26 462 aa9.33□□□□□ -0.92
PTCSC3-201ENST00000556013 STAP2Q9UGK3 403 aa9.33□□□□□ -0.92
PTCSC3-201ENST00000556013 PLXNB2O15031 1838 aa9.33□□□□□ -0.92
PTCSC3-201ENST00000556013 RANBP2P49792 3224 aaKnown RBP9.32□□□□□ -0.92
PTCSC3-201ENST00000556013 DNM1LO00429 736 aa9.32□□□□□ -0.92
PTCSC3-201ENST00000556013 SEPT4O43236 478 aa9.32□□□□□ -0.92
PTCSC3-201ENST00000556013 FDX1P10109 184 aa9.32□□□□□ -0.92
PTCSC3-201ENST00000556013 FCER1AP12319 257 aa9.32□□□□□ -0.92
PTCSC3-201ENST00000556013 ADORA2AP29274 412 aa9.32□□□□□ -0.92
PTCSC3-201ENST00000556013 STAT3P40763 770 aa9.32□□□□□ -0.92
PTCSC3-201ENST00000556013 LRIT3Q3SXY7 679 aa9.32□□□□□ -0.92
PTCSC3-201ENST00000556013 PPP4R3BQ5MIZ7 849 aa9.32□□□□□ -0.92
PTCSC3-201ENST00000556013 ZNF444Q8N0Y2 327 aaPredicted RBP9.32□□□□□ -0.92
PTCSC3-201ENST00000556013 MSL3Q8N5Y2 521 aaKnown RBP9.32□□□□□ -0.92
PTCSC3-201ENST00000556013 OSBP2Q969R2 916 aa9.32□□□□□ -0.92
PTCSC3-201ENST00000556013 MKNK2Q9HBH9 465 aa9.32□□□□□ -0.92
PTCSC3-201ENST00000556013 FLRT1Q9NZU1 646 aa9.32□□□□□ -0.92
PTCSC3-201ENST00000556013 PFASO15067 1338 aa9.31□□□□□ -0.92
PTCSC3-201ENST00000556013 ATP2A1O14983 1001 aa9.31□□□□□ -0.92
PTCSC3-201ENST00000556013 SMARCA5O60264 1052 aaPredicted RBP9.31□□□□□ -0.92
PTCSC3-201ENST00000556013 COBLO75128 1261 aa9.31□□□□□ -0.92
PTCSC3-201ENST00000556013 CYBAP13498 195 aa9.31□□□□□ -0.92
PTCSC3-201ENST00000556013 EVX2Q03828 476 aa9.31□□□□□ -0.92
PTCSC3-201ENST00000556013 AAMPQ13685 434 aa9.31□□□□□ -0.92
PTCSC3-201ENST00000556013 TMEM132BQ14DG7 1078 aa9.31□□□□□ -0.92
PTCSC3-201ENST00000556013 SLFNL1Q499Z3 407 aa9.31□□□□□ -0.92
PTCSC3-201ENST00000556013 KIAA1755Q5JYT7 1200 aa9.31□□□□□ -0.92
PTCSC3-201ENST00000556013 C1orf53Q5VUE5 145 aa9.31□□□□□ -0.92
PTCSC3-201ENST00000556013 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.31□□□□□ -0.92
PTCSC3-201ENST00000556013 NCAPG2Q86XI2 1143 aa9.31□□□□□ -0.92
PTCSC3-201ENST00000556013 PRPF38AQ8NAV1 312 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms