RNA–Protein interactions for RNA: ENST00000555690.5

PPP4R4-204, Transcript of protein phosphatase 4 regulatory subunit 4, humanhuman

TSL 3

Gene PPP4R4, Length 680 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4-204ENST00000555690 COG2Q14746 738 aa29.47■■■□□ 2.31
PPP4R4-204ENST00000555690 LHX8Q68G74 356 aa29.47■■■□□ 2.31
PPP4R4-204ENST00000555690 LRRCC1Q9C099 1032 aa29.47■■■□□ 2.31
PPP4R4-204ENST00000555690 ZMYND8Q9ULU4 1186 aaPredicted RBP29.47■■■□□ 2.31
PPP4R4-204ENST00000555690 LAMA3Q16787 3333 aa29.47■■■□□ 2.31
PPP4R4-204ENST00000555690 CYP2D7A0A087X1C5 515 aa29.46■■■□□ 2.31
PPP4R4-204ENST00000555690 AKR1B1P15121 316 aa29.46■■■□□ 2.31
PPP4R4-204ENST00000555690 KIAA1755Q5JYT7 1200 aa29.46■■■□□ 2.31
PPP4R4-204ENST00000555690 CLEC10AQ8IUN9 316 aa29.46■■■□□ 2.31
PPP4R4-204ENST00000555690 TANGO6Q9C0B7 1094 aa29.46■■■□□ 2.31
PPP4R4-204ENST00000555690 HOXC10Q9NYD6 342 aa29.46■■■□□ 2.31
PPP4R4-204ENST00000555690 UBE3CQ15386 1083 aa29.45■■■□□ 2.31
PPP4R4-204ENST00000555690 MFSD14CQ5VZR4 134 aa29.45■■■□□ 2.31
PPP4R4-204ENST00000555690 SIAH1Q8IUQ4 282 aa29.45■■■□□ 2.31
PPP4R4-204ENST00000555690 PFASO15067 1338 aa29.45■■■□□ 2.3
PPP4R4-204ENST00000555690 USP17L12C9JPN9 530 aa29.44■■■□□ 2.3
PPP4R4-204ENST00000555690 USP17L21D6R901 530 aa29.44■■■□□ 2.3
PPP4R4-204ENST00000555690 GRB14Q14449 540 aa29.44■■■□□ 2.3
PPP4R4-204ENST00000555690 C12orf60Q5U649 245 aa29.44■■■□□ 2.3
PPP4R4-204ENST00000555690 A0A1W2PPC1 479 aa29.43■■■□□ 2.3
PPP4R4-204ENST00000555690 CDK8P49336 464 aa29.43■■■□□ 2.3
PPP4R4-204ENST00000555690 ATP2B2Q01814 1243 aa29.43■■■□□ 2.3
PPP4R4-204ENST00000555690 NPLOC4Q8TAT6 608 aa29.43■■■□□ 2.3
PPP4R4-204ENST00000555690 MOV10L1Q9BXT6 1211 aaKnown RBP29.43■■■□□ 2.3
PPP4R4-204ENST00000555690 SLC4A4Q9Y6R1 1079 aa29.43■■■□□ 2.3
PPP4R4-204ENST00000555690 BAZ2AQ9UIF9 1905 aaKnown RBP29.43■■■□□ 2.3
PPP4R4-204ENST00000555690 HOXC6P09630 235 aa29.42■■■□□ 2.3
PPP4R4-204ENST00000555690 SYN1P17600 705 aa29.42■■■□□ 2.3
PPP4R4-204ENST00000555690 ICA1Q05084 483 aa29.42■■■□□ 2.3
PPP4R4-204ENST00000555690 AMOTL1Q8IY63 956 aa29.42■■■□□ 2.3
PPP4R4-204ENST00000555690 SPICE1Q8N0Z3 855 aa29.42■■■□□ 2.3
PPP4R4-204ENST00000555690 PUS7LQ9H0K6 701 aaKnown RBP29.42■■■□□ 2.3
PPP4R4-204ENST00000555690 ARHGEF10LQ9HCE6 1279 aa29.42■■■□□ 2.3
PPP4R4-204ENST00000555690 COL6A1P12109 1028 aa29.41■■■□□ 2.3
PPP4R4-204ENST00000555690 LPAR1Q92633 364 aa29.41■■■□□ 2.3
PPP4R4-204ENST00000555690 DDRGK1Q96HY6 314 aa29.41■■■□□ 2.3
PPP4R4-204ENST00000555690 CCDC17Q96LX7 622 aa29.41■■■□□ 2.3
PPP4R4-204ENST00000555690 GDF15Q99988 308 aa29.41■■■□□ 2.3
PPP4R4-204ENST00000555690 SPATC1LQ9H0A9 340 aa29.41■■■□□ 2.3
PPP4R4-204ENST00000555690 TMX2Q9Y320 296 aa29.41■■■□□ 2.3
PPP4R4-204ENST00000555690 CYP2C19P33261 490 aa29.4■■■□□ 2.3
PPP4R4-204ENST00000555690 ZSCAN25Q6NSZ9 544 aa29.4■■■□□ 2.3
PPP4R4-204ENST00000555690 C16orf86Q6ZW13 317 aa29.4■■■□□ 2.3
PPP4R4-204ENST00000555690 VCPKMTQ9H867 229 aa29.4■■■□□ 2.3
PPP4R4-204ENST00000555690 FLOT1O75955 427 aa29.39■■■□□ 2.3
PPP4R4-204ENST00000555690 CNGA1P29973 690 aa29.39■■■□□ 2.3
PPP4R4-204ENST00000555690 DSG3P32926 999 aa29.39■■■□□ 2.3
PPP4R4-204ENST00000555690 CTR9Q6PD62 1173 aa29.39■■■□□ 2.3
PPP4R4-204ENST00000555690 DPP9Q86TI2 863 aa29.39■■■□□ 2.3
PPP4R4-204ENST00000555690 SH2D4AQ9H788 454 aa29.39■■■□□ 2.3
PPP4R4-204ENST00000555690 MYH8P13535 1937 aa29.38■■■□□ 2.29
PPP4R4-204ENST00000555690 SOX1O00570 391 aaPredicted RBP29.38■■■□□ 2.29
PPP4R4-204ENST00000555690 ERCC3P19447 782 aa29.38■■■□□ 2.29
PPP4R4-204ENST00000555690 ADORA2AP29274 412 aa29.38■■■□□ 2.29
PPP4R4-204ENST00000555690 SAMD1Q6SPF0 538 aaPredicted RBP29.38■■■□□ 2.29
PPP4R4-204ENST00000555690 ECHDC1Q9NTX5 307 aa29.38■■■□□ 2.29
PPP4R4-204ENST00000555690 RLFQ13129 1914 aa29.37■■■□□ 2.29
PPP4R4-204ENST00000555690 STRNO43815 780 aa29.37■■■□□ 2.29
PPP4R4-204ENST00000555690 BMP8BP34820 402 aa29.37■■■□□ 2.29
PPP4R4-204ENST00000555690 PLS1Q14651 629 aa29.37■■■□□ 2.29
PPP4R4-204ENST00000555690 MB21D1Q8N884 522 aa29.37■■■□□ 2.29
PPP4R4-204ENST00000555690 SHCBP1Q8NEM2 672 aa29.37■■■□□ 2.29
PPP4R4-204ENST00000555690 ATG4CQ96DT6 458 aa29.37■■■□□ 2.29
PPP4R4-204ENST00000555690 DDX20Q9UHI6 824 aaKnown RBP29.37■■■□□ 2.29
PPP4R4-204ENST00000555690 MYH7P12883 1935 aa29.36■■■□□ 2.29
PPP4R4-204ENST00000555690 DNAH12Q6ZR08 3092 aa29.36■■■□□ 2.29
PPP4R4-204ENST00000555690 IGHA2P01877 340 aa29.36■■■□□ 2.29
PPP4R4-204ENST00000555690 EEF2P13639 858 aaKnown RBP29.36■■■□□ 2.29
PPP4R4-204ENST00000555690 LRRC26Q2I0M4 334 aa29.36■■■□□ 2.29
PPP4R4-204ENST00000555690 TRPV1Q8NER1 839 aa29.36■■■□□ 2.29
PPP4R4-204ENST00000555690 MAGEA10P43363 369 aaPredicted RBP29.35■■■□□ 2.29
PPP4R4-204ENST00000555690 LRCH3Q96II8 777 aa29.35■■■□□ 2.29
PPP4R4-204ENST00000555690 WDR46O15213 610 aaKnown RBP29.34■■■□□ 2.29
PPP4R4-204ENST00000555690 COBLO75128 1261 aa29.34■■■□□ 2.29
PPP4R4-204ENST00000555690 NCAPG2Q86XI2 1143 aa29.34■■■□□ 2.29
PPP4R4-204ENST00000555690 STRBPQ96SI9 672 aaKnown RBP29.34■■■□□ 2.29
PPP4R4-204ENST00000555690 DCTPP1Q9H773 170 aa29.34■■■□□ 2.29
PPP4R4-204ENST00000555690 KANSL2Q9H9L4 492 aa29.34■■■□□ 2.29
PPP4R4-204ENST00000555690 MSCO60682 206 aa29.33■■■□□ 2.29
PPP4R4-204ENST00000555690 CYBAP13498 195 aa29.33■■■□□ 2.29
PPP4R4-204ENST00000555690 TSHZ3Q63HK5 1081 aa29.33■■■□□ 2.29
PPP4R4-204ENST00000555690 OLFML2BQ68BL8 750 aa29.33■■■□□ 2.29
PPP4R4-204ENST00000555690 SENP6Q9GZR1 1112 aaPredicted RBP29.33■■■□□ 2.29
PPP4R4-204ENST00000555690 MROH8Q9H579 483 aa29.33■■■□□ 2.29
PPP4R4-204ENST00000555690 A0A0G2JMZ2 1700 aa29.32■■■□□ 2.28
PPP4R4-204ENST00000555690 ARPP21Q9UBL0 812 aaPredicted RBP29.32■■■□□ 2.28
PPP4R4-204ENST00000555690 TMEM132BQ14DG7 1078 aa29.31■■■□□ 2.28
PPP4R4-204ENST00000555690 KBTBD3Q8NAB2 608 aa29.31■■■□□ 2.28
PPP4R4-204ENST00000555690 FBXO28Q9NVF7 368 aa29.31■■■□□ 2.28
PPP4R4-204ENST00000555690 FRMPD3Q5JV73 1810 aa29.3■■■□□ 2.28
PPP4R4-204ENST00000555690 GSG1L2A8MUP6 293 aa29.3■■■□□ 2.28
PPP4R4-204ENST00000555690 RAD21O60216 631 aa29.3■■■□□ 2.28
PPP4R4-204ENST00000555690 STK11IPQ8N1F8 1099 aa29.3■■■□□ 2.28
PPP4R4-204ENST00000555690 OSBP2Q969R2 916 aa29.3■■■□□ 2.28
PPP4R4-204ENST00000555690 GPATCH3Q96I76 525 aa29.3■■■□□ 2.28
PPP4R4-204ENST00000555690 GNL3Q9BVP2 549 aaKnown RBP eCLIP29.3■■■□□ 2.28
PPP4R4-204ENST00000555690 GOPCQ9HD26 462 aa29.3■■■□□ 2.28
PPP4R4-204ENST00000555690 SLC5A4Q9NY91 659 aa29.3■■■□□ 2.28
PPP4R4-204ENST00000555690 SBK1Q52WX2 424 aa29.29■■■□□ 2.28
PPP4R4-204ENST00000555690 ABRAQ8N0Z2 381 aa29.29■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms