RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 SH2B2O14492 632 aaPredicted RBP10□□□□□ -0.81
SYNE2-217ENST00000555022 BUB1O43683 1085 aa10□□□□□ -0.81
SYNE2-217ENST00000555022 MBD4O95243 580 aa10□□□□□ -0.81
SYNE2-217ENST00000555022 CDC25CP30307 473 aa10□□□□□ -0.81
SYNE2-217ENST00000555022 PIP4K2BP78356 416 aa10□□□□□ -0.81
SYNE2-217ENST00000555022 TSR1Q2NL82 804 aaKnown RBP10□□□□□ -0.81
SYNE2-217ENST00000555022 NFRKBQ6P4R8 1299 aa10□□□□□ -0.81
SYNE2-217ENST00000555022 OTUD6BQ8N6M0 293 aa10□□□□□ -0.81
SYNE2-217ENST00000555022 TSEN2Q8NCE0 465 aaKnown RBP10□□□□□ -0.81
SYNE2-217ENST00000555022 NOC3LQ8WTT2 800 aaKnown RBP10□□□□□ -0.81
SYNE2-217ENST00000555022 NELFBQ8WX92 580 aa10□□□□□ -0.81
SYNE2-217ENST00000555022 NAPBQ9H115 298 aa10□□□□□ -0.81
SYNE2-217ENST00000555022 CNNM1Q9NRU3 951 aa10□□□□□ -0.81
SYNE2-217ENST00000555022 AGPAT5Q9NUQ2 364 aa10□□□□□ -0.81
SYNE2-217ENST00000555022 ZSWIM5Q9P217 1185 aa10□□□□□ -0.81
SYNE2-217ENST00000555022 DACH1Q9UI36 760 aa10□□□□□ -0.81
SYNE2-217ENST00000555022 ACTN4O43707 911 aaKnown RBP9.99□□□□□ -0.81
SYNE2-217ENST00000555022 HOXB7P09629 217 aa9.99□□□□□ -0.81
SYNE2-217ENST00000555022 COPB1P53618 953 aaKnown RBP9.99□□□□□ -0.81
SYNE2-217ENST00000555022 USP14P54578 494 aa9.99□□□□□ -0.81
SYNE2-217ENST00000555022 FOXO4P98177 505 aa9.99□□□□□ -0.81
SYNE2-217ENST00000555022 MDM2Q00987 491 aaPredicted RBP9.99□□□□□ -0.81
SYNE2-217ENST00000555022 ARID5AQ03989 594 aa9.99□□□□□ -0.81
SYNE2-217ENST00000555022 RTN1Q16799 776 aa9.99□□□□□ -0.81
SYNE2-217ENST00000555022 EFCAB13Q8IY85 973 aa9.99□□□□□ -0.81
SYNE2-217ENST00000555022 PAGE5Q96GU1 130 aa9.99□□□□□ -0.81
SYNE2-217ENST00000555022 AGXT2Q9BYV1 514 aa9.99□□□□□ -0.81
SYNE2-217ENST00000555022 RAB21Q9UL25 225 aa9.99□□□□□ -0.81
SYNE2-217ENST00000555022 A0A087WUV0 522 aaPredicted RBP9.99□□□□□ -0.81
SYNE2-217ENST00000555022 KCNJ18B7U540 433 aa9.99□□□□□ -0.81
SYNE2-217ENST00000555022 POTEB2H3BUK9 544 aa9.99□□□□□ -0.81
SYNE2-217ENST00000555022 NDUFA10O95299 355 aa9.99□□□□□ -0.81
SYNE2-217ENST00000555022 MOCS3O95396 460 aa9.99□□□□□ -0.81
SYNE2-217ENST00000555022 GCP02774 474 aa9.99□□□□□ -0.81
SYNE2-217ENST00000555022 TRIM21P19474 475 aaKnown RBP9.99□□□□□ -0.81
SYNE2-217ENST00000555022 MCAMP43121 646 aa9.99□□□□□ -0.81
SYNE2-217ENST00000555022 IFT88Q13099 833 aa9.99□□□□□ -0.81
SYNE2-217ENST00000555022 TCIRG1Q13488 830 aa9.99□□□□□ -0.81
SYNE2-217ENST00000555022 KCNJ12Q14500 433 aa9.99□□□□□ -0.81
SYNE2-217ENST00000555022 TRADDQ15628 312 aa9.99□□□□□ -0.81
SYNE2-217ENST00000555022 SPATA1Q5VX52 437 aa9.99□□□□□ -0.81
SYNE2-217ENST00000555022 TRIM22Q8IYM9 498 aa9.99□□□□□ -0.81
SYNE2-217ENST00000555022 PACSIN2Q9UNF0 486 aaPredicted RBP9.99□□□□□ -0.81
SYNE2-217ENST00000555022 PTPRUQ92729 1446 aa9.99□□□□□ -0.81
SYNE2-217ENST00000555022 ADAMTS3O15072 1205 aa9.98□□□□□ -0.81
SYNE2-217ENST00000555022 CDKL5O76039 1030 aa9.98□□□□□ -0.81
SYNE2-217ENST00000555022 CABP4P57796 275 aa9.98□□□□□ -0.81
SYNE2-217ENST00000555022 ARHGEF25Q86VW2 580 aa9.98□□□□□ -0.81
SYNE2-217ENST00000555022 CNGA4Q8IV77 575 aa9.98□□□□□ -0.81
SYNE2-217ENST00000555022 FAM217BQ9NTX9 383 aaPredicted RBP9.98□□□□□ -0.81
SYNE2-217ENST00000555022 CWC25Q9NXE8 425 aaPredicted RBP9.98□□□□□ -0.81
SYNE2-217ENST00000555022 JAG2Q9Y219 1238 aa9.98□□□□□ -0.81
SYNE2-217ENST00000555022 TACC3Q9Y6A5 838 aa9.98□□□□□ -0.81
SYNE2-217ENST00000555022 AGPSO00116 658 aa9.98□□□□□ -0.81
SYNE2-217ENST00000555022 PPP6R2O75170 966 aa9.98□□□□□ -0.81
SYNE2-217ENST00000555022 TATP17735 454 aaPredicted RBP9.98□□□□□ -0.81
SYNE2-217ENST00000555022 IL15P40933 162 aaPredicted RBP9.98□□□□□ -0.81
SYNE2-217ENST00000555022 PHKA1P46020 1223 aa9.98□□□□□ -0.81
SYNE2-217ENST00000555022 PPP2R5AQ15172 486 aa9.98□□□□□ -0.81
SYNE2-217ENST00000555022 WHAMMP3Q1A5X7 153 aa9.98□□□□□ -0.81
SYNE2-217ENST00000555022 CCDC181Q5TID7 509 aa9.98□□□□□ -0.81
SYNE2-217ENST00000555022 TYW1BQ6NUM6 668 aa9.98□□□□□ -0.81
SYNE2-217ENST00000555022 CYP26C1Q6V0L0 522 aa9.98□□□□□ -0.81
SYNE2-217ENST00000555022 GBP6Q6ZN66 633 aa9.98□□□□□ -0.81
SYNE2-217ENST00000555022 RASGRP2Q7LDG7 609 aa9.98□□□□□ -0.81
SYNE2-217ENST00000555022 MAATS1Q7Z4T9 603 aa9.98□□□□□ -0.81
SYNE2-217ENST00000555022 TICAM2Q86XR7 235 aa9.98□□□□□ -0.81
SYNE2-217ENST00000555022 MAGEB6Q8N7X4 407 aa9.98□□□□□ -0.81
SYNE2-217ENST00000555022 OR2W6PQ8NHA6 318 aa9.98□□□□□ -0.81
SYNE2-217ENST00000555022 APPBP2Q92624 585 aa9.98□□□□□ -0.81
SYNE2-217ENST00000555022 TRIM47Q96LD4 638 aa9.98□□□□□ -0.81
SYNE2-217ENST00000555022 PANX2Q96RD6 677 aa9.98□□□□□ -0.81
SYNE2-217ENST00000555022 LRWD1Q9UFC0 647 aa9.98□□□□□ -0.81
SYNE2-217ENST00000555022 TTF2Q9UNY4 1162 aaKnown RBP9.98□□□□□ -0.81
SYNE2-217ENST00000555022 V9GY48 417 aaPredicted RBP9.98□□□□□ -0.81
SYNE2-217ENST00000555022 JCADQ9P266 1359 aa9.98□□□□□ -0.81
SYNE2-217ENST00000555022 MYO1BO43795 1136 aa9.98□□□□□ -0.81
SYNE2-217ENST00000555022 PRPF6O94906 941 aaKnown RBP9.98□□□□□ -0.81
SYNE2-217ENST00000555022 VEGFAP15692 232 aaPredicted RBP9.98□□□□□ -0.81
SYNE2-217ENST00000555022 PMS1P54277 932 aaKnown RBP9.98□□□□□ -0.81
SYNE2-217ENST00000555022 HERVK_113P62684 666 aa9.98□□□□□ -0.81
SYNE2-217ENST00000555022 EVX2Q03828 476 aa9.98□□□□□ -0.81
SYNE2-217ENST00000555022 CCDC91Q7Z6B0 441 aa9.98□□□□□ -0.81
SYNE2-217ENST00000555022 GIMAP7Q8NHV1 300 aa9.98□□□□□ -0.81
SYNE2-217ENST00000555022 SETD1AO15047 1707 aaKnown RBP9.98□□□□□ -0.81
SYNE2-217ENST00000555022 ABCC6O95255 1503 aa9.97□□□□□ -0.81
SYNE2-217ENST00000555022 TRIM75PA6NK02 468 aa9.97□□□□□ -0.81
SYNE2-217ENST00000555022 NBPF26B4DH59 902 aa9.97□□□□□ -0.81
SYNE2-217ENST00000555022 IPO7O95373 1038 aaKnown RBP9.97□□□□□ -0.81
SYNE2-217ENST00000555022 NBPF14Q5TI25 921 aa9.97□□□□□ -0.81
SYNE2-217ENST00000555022 NBPF10Q6P3W6 841 aaKnown RBP9.97□□□□□ -0.81
SYNE2-217ENST00000555022 LDHAL6AQ6ZMR3 332 aa9.97□□□□□ -0.81
SYNE2-217ENST00000555022 APTXQ7Z2E3 356 aaKnown RBP9.97□□□□□ -0.81
SYNE2-217ENST00000555022 NBPF15Q8N660 670 aa9.97□□□□□ -0.81
SYNE2-217ENST00000555022 IQUBQ8NA54 791 aa9.97□□□□□ -0.81
SYNE2-217ENST00000555022 MARCH10Q8NA82 808 aaPredicted RBP9.97□□□□□ -0.81
SYNE2-217ENST00000555022 SDR42E1Q8WUS8 393 aa9.97□□□□□ -0.81
SYNE2-217ENST00000555022 KANSL2Q9H9L4 492 aa9.97□□□□□ -0.81
SYNE2-217ENST00000555022 LY9Q9HBG7 655 aa9.97□□□□□ -0.81
SYNE2-217ENST00000555022 FAM207AQ9NSI2 230 aaPredicted RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms