RNA–Protein interactions for RNA: ENST00000554996.5

CCDC85C-203, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 4

Gene CCDC85C, Length 619 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-203ENST00000554996 NEDD4P46934 1319 aa12.38□□□□□ -0.43
CCDC85C-203ENST00000554996 MYCP01106 439 aaPredicted RBP12.38□□□□□ -0.43
CCDC85C-203ENST00000554996 RASEFQ8IZ41 740 aa12.38□□□□□ -0.43
CCDC85C-203ENST00000554996 ANKRD13CQ8N6S4 541 aa12.38□□□□□ -0.43
CCDC85C-203ENST00000554996 ACER1Q8TDN7 264 aa12.38□□□□□ -0.43
CCDC85C-203ENST00000554996 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.38□□□□□ -0.43
CCDC85C-203ENST00000554996 INCENPQ9NQS7 918 aa12.38□□□□□ -0.43
CCDC85C-203ENST00000554996 SRRDQ9UH36 339 aa12.38□□□□□ -0.43
CCDC85C-203ENST00000554996 FRMPD3Q5JV73 1810 aa12.38□□□□□ -0.43
CCDC85C-203ENST00000554996 DNAH12Q6ZR08 3092 aa12.38□□□□□ -0.43
CCDC85C-203ENST00000554996 MYPNQ86TC9 1320 aa12.37□□□□□ -0.43
CCDC85C-203ENST00000554996 MYH4Q9Y623 1939 aa12.37□□□□□ -0.43
CCDC85C-203ENST00000554996 SLC3A2P08195 630 aaKnown RBP12.37□□□□□ -0.43
CCDC85C-203ENST00000554996 NT5C2P49902 561 aa12.37□□□□□ -0.43
CCDC85C-203ENST00000554996 BACE1P56817 501 aa12.37□□□□□ -0.43
CCDC85C-203ENST00000554996 PDE4BQ07343 736 aa12.37□□□□□ -0.43
CCDC85C-203ENST00000554996 ZYXQ15942 572 aaKnown RBP12.37□□□□□ -0.43
CCDC85C-203ENST00000554996 SLC9C1Q4G0N8 1177 aa12.37□□□□□ -0.43
CCDC85C-203ENST00000554996 ASCC2Q9H1I8 757 aaPredicted RBP12.37□□□□□ -0.43
CCDC85C-203ENST00000554996 RNF41Q9H4P4 317 aaPredicted RBP12.37□□□□□ -0.43
CCDC85C-203ENST00000554996 TXNRD2Q9NNW7 524 aa12.37□□□□□ -0.43
CCDC85C-203ENST00000554996 EMILIN3Q9NT22 766 aa12.37□□□□□ -0.43
CCDC85C-203ENST00000554996 GINM1Q9NU53 330 aa12.37□□□□□ -0.43
CCDC85C-203ENST00000554996 ALPK3Q96L96 1907 aa12.37□□□□□ -0.43
CCDC85C-203ENST00000554996 IGKV6D-41A0A0C4DH26 115 aa12.36□□□□□ -0.43
CCDC85C-203ENST00000554996 E7EWF7 191 aa12.36□□□□□ -0.43
CCDC85C-203ENST00000554996 PRDM1O75626 825 aa12.36□□□□□ -0.43
CCDC85C-203ENST00000554996 AKR1B1P15121 316 aa12.36□□□□□ -0.43
CCDC85C-203ENST00000554996 EN2P19622 333 aaPredicted RBP12.36□□□□□ -0.43
CCDC85C-203ENST00000554996 COL9A3Q14050 684 aaPredicted RBP12.36□□□□□ -0.43
CCDC85C-203ENST00000554996 MTFR1Q15390 333 aa12.36□□□□□ -0.43
CCDC85C-203ENST00000554996 CERKLQ49MI3 558 aaPredicted RBP12.36□□□□□ -0.43
CCDC85C-203ENST00000554996 MFSD6Q6ZSS7 791 aa12.36□□□□□ -0.43
CCDC85C-203ENST00000554996 SMCR8Q8TEV9 937 aaPredicted RBP12.36□□□□□ -0.43
CCDC85C-203ENST00000554996 CCDC17Q96LX7 622 aa12.36□□□□□ -0.43
CCDC85C-203ENST00000554996 TRIM34Q9BYJ4 488 aa12.36□□□□□ -0.43
CCDC85C-203ENST00000554996 TBC1D2Q9BYX2 928 aa12.36□□□□□ -0.43
CCDC85C-203ENST00000554996 AS3MTQ9HBK9 375 aa12.36□□□□□ -0.43
CCDC85C-203ENST00000554996 ZNF287Q9HBT7 754 aa12.36□□□□□ -0.43
CCDC85C-203ENST00000554996 SNX14Q9Y5W7 946 aa12.36□□□□□ -0.43
CCDC85C-203ENST00000554996 A0A1W2PRG0 241 aa12.35□□□□□ -0.43
CCDC85C-203ENST00000554996 FMNL1O95466 1100 aaPredicted RBP12.35□□□□□ -0.43
CCDC85C-203ENST00000554996 NOVP48745 357 aa12.35□□□□□ -0.43
CCDC85C-203ENST00000554996 KIF22Q14807 665 aa12.35□□□□□ -0.43
CCDC85C-203ENST00000554996 SEPT2Q15019 361 aa12.35□□□□□ -0.43
CCDC85C-203ENST00000554996 FAM110CQ1W6H9 321 aa12.35□□□□□ -0.43
CCDC85C-203ENST00000554996 ABCB5Q2M3G0 1257 aa12.35□□□□□ -0.43
CCDC85C-203ENST00000554996 KIAA1755Q5JYT7 1200 aa12.35□□□□□ -0.43
CCDC85C-203ENST00000554996 RNF20Q5VTR2 975 aa12.35□□□□□ -0.43
CCDC85C-203ENST00000554996 SHISA4Q96DD7 197 aa12.35□□□□□ -0.43
CCDC85C-203ENST00000554996 CNNM2Q9H8M5 875 aa12.35□□□□□ -0.43
CCDC85C-203ENST00000554996 MKNK2Q9HBH9 465 aa12.35□□□□□ -0.43
CCDC85C-203ENST00000554996 USP17L10C9JJH3 530 aa12.34□□□□□ -0.43
CCDC85C-203ENST00000554996 ANAPC15P60006 121 aa12.34□□□□□ -0.43
CCDC85C-203ENST00000554996 RAB3GAP1Q15042 981 aa12.34□□□□□ -0.43
CCDC85C-203ENST00000554996 ADCK5Q3MIX3 580 aa12.34□□□□□ -0.43
CCDC85C-203ENST00000554996 TMEM179Q6ZVK1 233 aa12.34□□□□□ -0.43
CCDC85C-203ENST00000554996 SIAH1Q8IUQ4 282 aa12.34□□□□□ -0.43
CCDC85C-203ENST00000554996 MB21D2Q8IYB1 491 aaPredicted RBP12.34□□□□□ -0.43
CCDC85C-203ENST00000554996 STK11IPQ8N1F8 1099 aa12.34□□□□□ -0.43
CCDC85C-203ENST00000554996 NEDD1Q8NHV4 660 aa12.34□□□□□ -0.43
CCDC85C-203ENST00000554996 P2RX7Q99572 595 aaKnown RBP12.34□□□□□ -0.43
CCDC85C-203ENST00000554996 B4E1Z4 1266 aa12.33□□□□□ -0.44
CCDC85C-203ENST00000554996 TNPO2O14787 897 aaKnown RBP12.33□□□□□ -0.44
CCDC85C-203ENST00000554996 CNMDO75829 334 aa12.33□□□□□ -0.44
CCDC85C-203ENST00000554996 GNRH1P01148 92 aa12.33□□□□□ -0.44
CCDC85C-203ENST00000554996 ELNP15502 786 aa12.33□□□□□ -0.44
CCDC85C-203ENST00000554996 ZKSCAN1P17029 563 aaPredicted RBP12.33□□□□□ -0.44
CCDC85C-203ENST00000554996 VCAM1P19320 739 aa12.33□□□□□ -0.44
CCDC85C-203ENST00000554996 HOXA7P31268 230 aaPredicted RBP12.33□□□□□ -0.44
CCDC85C-203ENST00000554996 RBM25P49756 843 aaKnown RBP12.33□□□□□ -0.44
CCDC85C-203ENST00000554996 FLT3LGP49771 235 aa12.33□□□□□ -0.44
CCDC85C-203ENST00000554996 FCGRTP55899 365 aa12.33□□□□□ -0.44
CCDC85C-203ENST00000554996 ANTXR2P58335 489 aa12.33□□□□□ -0.44
CCDC85C-203ENST00000554996 HERVK_113P62684 666 aa12.33□□□□□ -0.44
CCDC85C-203ENST00000554996 FAM47AQ5JRC9 791 aa12.33□□□□□ -0.44
CCDC85C-203ENST00000554996 ESR2Q92731 530 aa12.33□□□□□ -0.44
CCDC85C-203ENST00000554996 C12orf42Q96LP6 360 aa12.33□□□□□ -0.44
CCDC85C-203ENST00000554996 KRT23Q9C075 422 aa12.33□□□□□ -0.44
CCDC85C-203ENST00000554996 IL17RBQ9NRM6 502 aa12.33□□□□□ -0.44
CCDC85C-203ENST00000554996 TCP11L1Q9NUJ3 509 aa12.33□□□□□ -0.44
CCDC85C-203ENST00000554996 TMOD4Q9NZQ9 345 aa12.33□□□□□ -0.44
CCDC85C-203ENST00000554996 MORF4L1Q9UBU8 362 aa12.33□□□□□ -0.44
CCDC85C-203ENST00000554996 PNMA3Q9UL41 463 aa12.33□□□□□ -0.44
CCDC85C-203ENST00000554996 ZNF236Q9UL36 1845 aa12.32□□□□□ -0.44
CCDC85C-203ENST00000554996 C19orf81C9J6K1 198 aa12.32□□□□□ -0.44
CCDC85C-203ENST00000554996 RANBP6O60518 1105 aaKnown RBP12.32□□□□□ -0.44
CCDC85C-203ENST00000554996 KDM4AO75164 1064 aa12.32□□□□□ -0.44
CCDC85C-203ENST00000554996 TFAP4Q01664 338 aa12.32□□□□□ -0.44
CCDC85C-203ENST00000554996 KRT32Q14532 448 aa12.32□□□□□ -0.44
CCDC85C-203ENST00000554996 Q3C1V9 767 aa12.32□□□□□ -0.44
CCDC85C-203ENST00000554996 CYB5R4Q7L1T6 521 aa12.32□□□□□ -0.44
CCDC85C-203ENST00000554996 ZNF444Q8N0Y2 327 aaPredicted RBP12.32□□□□□ -0.44
CCDC85C-203ENST00000554996 NCOA7Q8NI08 942 aa12.32□□□□□ -0.44
CCDC85C-203ENST00000554996 TBC1D32Q96NH3 1257 aa12.32□□□□□ -0.44
CCDC85C-203ENST00000554996 KIF2CQ99661 725 aa12.32□□□□□ -0.44
CCDC85C-203ENST00000554996 KIAA1683Q9H0B3 1180 aa12.32□□□□□ -0.44
CCDC85C-203ENST00000554996 PORCNQ9H237 461 aa12.32□□□□□ -0.44
CCDC85C-203ENST00000554996 ZSWIM5Q9P217 1185 aa12.32□□□□□ -0.44
CCDC85C-203ENST00000554996 WDR19Q8NEZ3 1342 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms