RNA–Protein interactions for RNA: ENST00000554995.1

PSEN1-211, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 592 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-211ENST00000554995 MFSD3Q96ES6 412 aa7.62□□□□□ -1.19
PSEN1-211ENST00000554995 APBA2Q99767 749 aa7.62□□□□□ -1.19
PSEN1-211ENST00000554995 PIDD1Q9HB75 910 aa7.62□□□□□ -1.19
PSEN1-211ENST00000554995 CBFA2T2O43439 604 aa7.61□□□□□ -1.19
PSEN1-211ENST00000554995 RNGTTO60942 597 aaKnown RBP7.61□□□□□ -1.19
PSEN1-211ENST00000554995 DRD2P14416 443 aa7.61□□□□□ -1.19
PSEN1-211ENST00000554995 PABPC4Q13310 644 aaKnown RBP eCLIP7.61□□□□□ -1.19
PSEN1-211ENST00000554995 CBX2Q14781 532 aaPredicted RBP7.61□□□□□ -1.19
PSEN1-211ENST00000554995 TM4SF20Q53R12 229 aa7.61□□□□□ -1.19
PSEN1-211ENST00000554995 HEATR6Q6AI08 1181 aaKnown RBP7.61□□□□□ -1.19
PSEN1-211ENST00000554995 PODNQ7Z5L7 613 aa7.61□□□□□ -1.19
PSEN1-211ENST00000554995 NIM1KQ8IY84 436 aa7.61□□□□□ -1.19
PSEN1-211ENST00000554995 ZNF512BQ96KM6 892 aaPredicted RBP7.61□□□□□ -1.19
PSEN1-211ENST00000554995 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.61□□□□□ -1.19
PSEN1-211ENST00000554995 GSX1Q9H4S2 264 aaPredicted RBP7.61□□□□□ -1.19
PSEN1-211ENST00000554995 DDX56Q9NY93 547 aaKnown RBP7.61□□□□□ -1.19
PSEN1-211ENST00000554995 APEX2Q9UBZ4 518 aa7.61□□□□□ -1.19
PSEN1-211ENST00000554995 IRS4O14654 1257 aaPredicted RBP7.6□□□□□ -1.19
PSEN1-211ENST00000554995 TIAF1O95411 115 aa7.6□□□□□ -1.19
PSEN1-211ENST00000554995 FAM209AQ5JX71 171 aa7.6□□□□□ -1.19
PSEN1-211ENST00000554995 YOD1Q5VVQ6 348 aaPredicted RBP7.6□□□□□ -1.19
PSEN1-211ENST00000554995 DCAF15Q66K64 600 aa7.6□□□□□ -1.19
PSEN1-211ENST00000554995 CCDC144CPQ8IYA2 1237 aa7.6□□□□□ -1.19
PSEN1-211ENST00000554995 NEDD1Q8NHV4 660 aa7.6□□□□□ -1.19
PSEN1-211ENST00000554995 XAGE3Q8WTP9 111 aa7.6□□□□□ -1.19
PSEN1-211ENST00000554995 STAG1Q8WVM7 1258 aa7.6□□□□□ -1.19
PSEN1-211ENST00000554995 PPP1R14AQ96A00 147 aa7.6□□□□□ -1.19
PSEN1-211ENST00000554995 TRIM11Q96F44 468 aa7.6□□□□□ -1.19
PSEN1-211ENST00000554995 FGD4Q96M96 766 aa7.6□□□□□ -1.19
PSEN1-211ENST00000554995 CDC6Q99741 560 aa7.6□□□□□ -1.19
PSEN1-211ENST00000554995 AARSD1Q9BTE6 412 aaKnown RBP7.6□□□□□ -1.19
PSEN1-211ENST00000554995 DHRS4Q9BTZ2 278 aa7.6□□□□□ -1.19
PSEN1-211ENST00000554995 FOXQ1Q9C009 403 aa7.6□□□□□ -1.19
PSEN1-211ENST00000554995 KLHL25Q9H0H3 589 aa7.6□□□□□ -1.19
PSEN1-211ENST00000554995 RRAGCQ9HB90 399 aa7.6□□□□□ -1.19
PSEN1-211ENST00000554995 NCOA5Q9HCD5 579 aaKnown RBP7.6□□□□□ -1.19
PSEN1-211ENST00000554995 LRP2BPQ9P2M1 347 aa7.6□□□□□ -1.19
PSEN1-211ENST00000554995 TRAV20A0A0B4J274 112 aa7.59□□□□□ -1.19
PSEN1-211ENST00000554995 SPDYE3A6NKU9 549 aa7.59□□□□□ -1.19
PSEN1-211ENST00000554995 RFPL3O75679 317 aa7.59□□□□□ -1.19
PSEN1-211ENST00000554995 ITGAVP06756 1048 aa7.59□□□□□ -1.19
PSEN1-211ENST00000554995 ASPAP45381 313 aa7.59□□□□□ -1.19
PSEN1-211ENST00000554995 PPP2R2AP63151 447 aa7.59□□□□□ -1.19
PSEN1-211ENST00000554995 HSP90AA2PQ14568 343 aaPredicted RBP7.59□□□□□ -1.19
PSEN1-211ENST00000554995 PLEKHG6Q3KR16 790 aa7.59□□□□□ -1.19
PSEN1-211ENST00000554995 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.59□□□□□ -1.19
PSEN1-211ENST00000554995 ZNF227Q86WZ6 799 aa7.59□□□□□ -1.19
PSEN1-211ENST00000554995 THNSL2Q86YJ6 484 aa7.59□□□□□ -1.19
PSEN1-211ENST00000554995 ZNF513Q8N8E2 541 aaPredicted RBP7.59□□□□□ -1.19
PSEN1-211ENST00000554995 C12orf50Q8NA57 414 aaPredicted RBP7.59□□□□□ -1.19
PSEN1-211ENST00000554995 PPP1R13LQ8WUF5 828 aa7.59□□□□□ -1.19
PSEN1-211ENST00000554995 LGR4Q9BXB1 951 aa7.59□□□□□ -1.19
PSEN1-211ENST00000554995 SSU72Q9NP77 194 aaKnown RBP7.59□□□□□ -1.19
PSEN1-211ENST00000554995 FAM105AQ9NUU6 356 aa7.59□□□□□ -1.19
PSEN1-211ENST00000554995 MRPS23Q9Y3D9 190 aaKnown RBP7.59□□□□□ -1.19
PSEN1-211ENST00000554995 ACTL7BQ9Y614 415 aa7.59□□□□□ -1.19
PSEN1-211ENST00000554995 TRBV23-1A0A0A0MS06 115 aa7.58□□□□□ -1.2
PSEN1-211ENST00000554995 PLD2O14939 933 aa7.58□□□□□ -1.2
PSEN1-211ENST00000554995 RAPGEF3O95398 923 aa7.58□□□□□ -1.2
PSEN1-211ENST00000554995 MYCLP1P12525 358 aaPredicted RBP7.58□□□□□ -1.2
PSEN1-211ENST00000554995 CNGA1P29973 690 aa7.58□□□□□ -1.2
PSEN1-211ENST00000554995 ARMCX6Q7L4S7 300 aa7.58□□□□□ -1.2
PSEN1-211ENST00000554995 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.58□□□□□ -1.2
PSEN1-211ENST00000554995 SMYD4Q8IYR2 804 aaPredicted RBP7.58□□□□□ -1.2
PSEN1-211ENST00000554995 C2CD4AQ8NCU7 369 aaPredicted RBP7.58□□□□□ -1.2
PSEN1-211ENST00000554995 LRRN4CLQ8ND94 238 aa7.58□□□□□ -1.2
PSEN1-211ENST00000554995 IPO9Q96P70 1041 aaKnown RBP7.58□□□□□ -1.2
PSEN1-211ENST00000554995 MKRN2Q9H000 416 aaKnown RBP7.58□□□□□ -1.2
PSEN1-211ENST00000554995 MRPL18Q9H0U6 180 aaKnown RBP7.58□□□□□ -1.2
PSEN1-211ENST00000554995 A0A087X0B3 334 aa7.57□□□□□ -1.2
PSEN1-211ENST00000554995 LRIG2O94898 1065 aa7.57□□□□□ -1.2
PSEN1-211ENST00000554995 STAT3P40763 770 aa7.57□□□□□ -1.2
PSEN1-211ENST00000554995 FNDC3BQ53EP0 1204 aaKnown RBP7.57□□□□□ -1.2
PSEN1-211ENST00000554995 NBPF12Q5TAG4 269 aaPredicted RBP7.57□□□□□ -1.2
PSEN1-211ENST00000554995 FDX2Q6P4F2 183 aa7.57□□□□□ -1.2
PSEN1-211ENST00000554995 IGF2-ASQ6U949 168 aa7.57□□□□□ -1.2
PSEN1-211ENST00000554995 ADAT2Q7Z6V5 191 aaKnown RBP7.57□□□□□ -1.2
PSEN1-211ENST00000554995 MFSD2AQ8NA29 543 aa7.57□□□□□ -1.2
PSEN1-211ENST00000554995 CHAC2Q8WUX2 184 aa7.57□□□□□ -1.2
PSEN1-211ENST00000554995 CLUHP3Q96NS8 147 aa7.57□□□□□ -1.2
PSEN1-211ENST00000554995 PLVAPQ9BX97 442 aa7.57□□□□□ -1.2
PSEN1-211ENST00000554995 FAM126AQ9BYI3 521 aaPredicted RBP7.57□□□□□ -1.2
PSEN1-211ENST00000554995 GBP3Q9H0R5 595 aa7.57□□□□□ -1.2
PSEN1-211ENST00000554995 IRF2BPLQ9H1B7 796 aa7.57□□□□□ -1.2
PSEN1-211ENST00000554995 ZNF451Q9Y4E5 1061 aa7.57□□□□□ -1.2
PSEN1-211ENST00000554995 FAM229AH3BQW9 127 aa7.56□□□□□ -1.2
PSEN1-211ENST00000554995 ANKRD39Q53RE8 183 aa7.56□□□□□ -1.2
PSEN1-211ENST00000554995 ANKRD34AQ69YU3 496 aa7.56□□□□□ -1.2
PSEN1-211ENST00000554995 ALYREFQ86V81 257 aaKnown RBP7.56□□□□□ -1.2
PSEN1-211ENST00000554995 JAMLQ86YT9 394 aa7.56□□□□□ -1.2
PSEN1-211ENST00000554995 KRTAP19-1Q8IUB9 90 aa7.56□□□□□ -1.2
PSEN1-211ENST00000554995 SCUBE1Q8IWY4 988 aa7.56□□□□□ -1.2
PSEN1-211ENST00000554995 C7orf61Q8IZ16 206 aa7.56□□□□□ -1.2
PSEN1-211ENST00000554995 AGGF1Q8N302 714 aaeCLIP7.56□□□□□ -1.2
PSEN1-211ENST00000554995 DNAJB8Q8NHS0 232 aa7.56□□□□□ -1.2
PSEN1-211ENST00000554995 PCOLCE2Q9UKZ9 415 aa7.56□□□□□ -1.2
PSEN1-211ENST00000554995 CEP131Q9UPN4 1083 aa7.56□□□□□ -1.2
PSEN1-211ENST00000554995 SUGT1Q9Y2Z0 365 aa7.56□□□□□ -1.2
PSEN1-211ENST00000554995 COL17A1Q9UMD9 1497 aaPredicted RBP7.55□□□□□ -1.2
PSEN1-211ENST00000554995 CNTNAP5Q8WYK1 1306 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms