RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 CDC5LQ99459 802 aaKnown RBP17.59■□□□□ 0.41
SYNE3-203ENST00000554873 SPATS2LQ9NUQ6 558 aaKnown RBP17.59■□□□□ 0.41
SYNE3-203ENST00000554873 RXRAP19793 462 aa17.59■□□□□ 0.41
SYNE3-203ENST00000554873 SNCBQ16143 134 aa17.59■□□□□ 0.41
SYNE3-203ENST00000554873 KRT40Q6A162 431 aa17.59■□□□□ 0.41
SYNE3-203ENST00000554873 NCAPH2Q6IBW4 605 aa17.59■□□□□ 0.41
SYNE3-203ENST00000554873 SELENOOQ9BVL4 669 aa17.59■□□□□ 0.41
SYNE3-203ENST00000554873 ETAA1Q9NY74 926 aa17.59■□□□□ 0.41
SYNE3-203ENST00000554873 CPDO75976 1380 aa17.59■□□□□ 0.41
SYNE3-203ENST00000554873 TLDC1Q6P9B6 456 aa17.58■□□□□ 0.41
SYNE3-203ENST00000554873 CYB5R4Q7L1T6 521 aa17.58■□□□□ 0.41
SYNE3-203ENST00000554873 CEP57Q86XR8 500 aa17.58■□□□□ 0.41
SYNE3-203ENST00000554873 ISCA1Q9BUE6 129 aa17.58■□□□□ 0.41
SYNE3-203ENST00000554873 NUP188Q5SRE5 1749 aa17.58■□□□□ 0.41
SYNE3-203ENST00000554873 ZMYM6O95789 1325 aa17.58■□□□□ 0.4
SYNE3-203ENST00000554873 PPP6R2O75170 966 aa17.58■□□□□ 0.4
SYNE3-203ENST00000554873 CENPHQ9H3R5 247 aa17.58■□□□□ 0.4
SYNE3-203ENST00000554873 ATP6V0A4Q9HBG4 840 aa17.58■□□□□ 0.4
SYNE3-203ENST00000554873 SENP2Q9HC62 589 aa17.58■□□□□ 0.4
SYNE3-203ENST00000554873 ANGEL1Q9UNK9 670 aaKnown RBP17.58■□□□□ 0.4
SYNE3-203ENST00000554873 CDC27P30260 824 aa17.57■□□□□ 0.4
SYNE3-203ENST00000554873 METAP2P50579 478 aaKnown RBP eCLIP17.57■□□□□ 0.4
SYNE3-203ENST00000554873 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.57■□□□□ 0.4
SYNE3-203ENST00000554873 FOXP4Q8IVH2 680 aaPredicted RBP17.57■□□□□ 0.4
SYNE3-203ENST00000554873 PHKBQ93100 1093 aa17.57■□□□□ 0.4
SYNE3-203ENST00000554873 MAP3K14Q99558 947 aa17.57■□□□□ 0.4
SYNE3-203ENST00000554873 SLC40A1Q9NP59 571 aa17.57■□□□□ 0.4
SYNE3-203ENST00000554873 ZNF18P17022 549 aa17.57■□□□□ 0.4
SYNE3-203ENST00000554873 SLC8A3P57103 927 aa17.57■□□□□ 0.4
SYNE3-203ENST00000554873 TBC1D10CQ8IV04 446 aa17.57■□□□□ 0.4
SYNE3-203ENST00000554873 CCDC13Q8IYE1 715 aa17.57■□□□□ 0.4
SYNE3-203ENST00000554873 ITFG2Q969R8 447 aa17.57■□□□□ 0.4
SYNE3-203ENST00000554873 GDAP1L1Q96MZ0 367 aa17.57■□□□□ 0.4
SYNE3-203ENST00000554873 HOOK1Q9UJC3 728 aaKnown RBP17.57■□□□□ 0.4
SYNE3-203ENST00000554873 FBXO3Q9UK99 471 aa17.57■□□□□ 0.4
SYNE3-203ENST00000554873 PKD1L3Q7Z443 1732 aa17.57■□□□□ 0.4
SYNE3-203ENST00000554873 ZEB2O60315 1214 aa17.57■□□□□ 0.4
SYNE3-203ENST00000554873 FAM237AA0A1B0GTK4 181 aa17.56■□□□□ 0.4
SYNE3-203ENST00000554873 IBSPP21815 317 aaPredicted RBP17.56■□□□□ 0.4
SYNE3-203ENST00000554873 TCIRG1Q13488 830 aa17.56■□□□□ 0.4
SYNE3-203ENST00000554873 LONRF3Q496Y0 759 aa17.56■□□□□ 0.4
SYNE3-203ENST00000554873 HSP90AA4PQ58FG1 418 aa17.56■□□□□ 0.4
SYNE3-203ENST00000554873 RESP18Q5W5W9 173 aa17.56■□□□□ 0.4
SYNE3-203ENST00000554873 FAM89AQ96GI7 184 aa17.56■□□□□ 0.4
SYNE3-203ENST00000554873 SH2B2O14492 632 aaPredicted RBP17.56■□□□□ 0.4
SYNE3-203ENST00000554873 OPA1O60313 960 aa17.56■□□□□ 0.4
SYNE3-203ENST00000554873 MCAMP43121 646 aa17.56■□□□□ 0.4
SYNE3-203ENST00000554873 NAP1L1P55209 391 aaKnown RBP17.56■□□□□ 0.4
SYNE3-203ENST00000554873 DRP2Q13474 957 aa17.56■□□□□ 0.4
SYNE3-203ENST00000554873 RCSD1Q6JBY9 416 aa17.56■□□□□ 0.4
SYNE3-203ENST00000554873 METTL16Q86W50 562 aaKnown RBP17.56■□□□□ 0.4
SYNE3-203ENST00000554873 C4AP0C0L4 1744 aa17.55■□□□□ 0.4
SYNE3-203ENST00000554873 C4BP0C0L5 1744 aa17.55■□□□□ 0.4
SYNE3-203ENST00000554873 GCKP35557 465 aa17.55■□□□□ 0.4
SYNE3-203ENST00000554873 NR1I3Q14994 352 aa17.55■□□□□ 0.4
SYNE3-203ENST00000554873 NAA25Q14CX7 972 aa17.55■□□□□ 0.4
SYNE3-203ENST00000554873 CCNI2Q6ZMN8 369 aaPredicted RBP17.55■□□□□ 0.4
SYNE3-203ENST00000554873 PPFIBP1Q86W92 1011 aa17.55■□□□□ 0.4
SYNE3-203ENST00000554873 PARP9Q8IXQ6 854 aa17.55■□□□□ 0.4
SYNE3-203ENST00000554873 FRMD3A2A2Y4 597 aa17.55■□□□□ 0.4
SYNE3-203ENST00000554873 MPHOSPH10O00566 681 aaKnown RBP17.55■□□□□ 0.4
SYNE3-203ENST00000554873 RNF187Q5TA31 235 aaPredicted RBP17.55■□□□□ 0.4
SYNE3-203ENST00000554873 APOA5Q6Q788 366 aa17.55■□□□□ 0.4
SYNE3-203ENST00000554873 RPGRIP1Q96KN7 1286 aa17.55■□□□□ 0.4
SYNE3-203ENST00000554873 TEX13AQ9BXU3 409 aaPredicted RBP17.55■□□□□ 0.4
SYNE3-203ENST00000554873 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.55■□□□□ 0.4
SYNE3-203ENST00000554873 NFE2L3Q9Y4A8 694 aa17.55■□□□□ 0.4
SYNE3-203ENST00000554873 PCDHA5Q9Y5H7 936 aa17.55■□□□□ 0.4
SYNE3-203ENST00000554873 DDX60Q8IY21 1712 aaKnown RBP17.55■□□□□ 0.4
SYNE3-203ENST00000554873 ERVV-2B6SEH9 535 aa17.54■□□□□ 0.4
SYNE3-203ENST00000554873 CDKL5O76039 1030 aa17.54■□□□□ 0.4
SYNE3-203ENST00000554873 EPB41P11171 864 aaKnown RBP17.54■□□□□ 0.4
SYNE3-203ENST00000554873 ADD2P35612 726 aa17.54■□□□□ 0.4
SYNE3-203ENST00000554873 PDE4BQ07343 736 aa17.54■□□□□ 0.4
SYNE3-203ENST00000554873 SLC9C2Q5TAH2 1124 aa17.54■□□□□ 0.4
SYNE3-203ENST00000554873 ZCRB1Q8TBF4 217 aaKnown RBP17.54■□□□□ 0.4
SYNE3-203ENST00000554873 GGA2Q9UJY4 613 aa17.54■□□□□ 0.4
SYNE3-203ENST00000554873 ZNF142P52746 1687 aaPredicted RBP17.54■□□□□ 0.4
SYNE3-203ENST00000554873 UBE2Q2LH0YL09 131 aa17.54■□□□□ 0.4
SYNE3-203ENST00000554873 CSF1RP07333 972 aa17.54■□□□□ 0.4
SYNE3-203ENST00000554873 BMP6P22004 513 aa17.54■□□□□ 0.4
SYNE3-203ENST00000554873 IFIT5Q13325 482 aaKnown RBP17.54■□□□□ 0.4
SYNE3-203ENST00000554873 NTRK3Q16288 839 aa17.54■□□□□ 0.4
SYNE3-203ENST00000554873 CCDC102BQ68D86 513 aa17.54■□□□□ 0.4
SYNE3-203ENST00000554873 TRAPPC11Q7Z392 1133 aa17.54■□□□□ 0.4
SYNE3-203ENST00000554873 MICU3Q86XE3 530 aa17.54■□□□□ 0.4
SYNE3-203ENST00000554873 NBPF5PQ86XG9 351 aaPredicted RBP17.54■□□□□ 0.4
SYNE3-203ENST00000554873 CCDC26Q8TAB7 109 aa17.54■□□□□ 0.4
SYNE3-203ENST00000554873 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.54■□□□□ 0.4
SYNE3-203ENST00000554873 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.54■□□□□ 0.4
SYNE3-203ENST00000554873 ZNF330Q9Y3S2 320 aaPredicted RBP17.54■□□□□ 0.4
SYNE3-203ENST00000554873 B4E1Z4 1266 aa17.53■□□□□ 0.4
SYNE3-203ENST00000554873 RWDD2BP57060 319 aa17.53■□□□□ 0.4
SYNE3-203ENST00000554873 PDCLQ13371 301 aa17.53■□□□□ 0.4
SYNE3-203ENST00000554873 MAB21L3Q8N8X9 362 aa17.53■□□□□ 0.4
SYNE3-203ENST00000554873 KCNH3Q9ULD8 1083 aa17.53■□□□□ 0.4
SYNE3-203ENST00000554873 GOLGA6L7A0A1B0GV03 622 aa17.53■□□□□ 0.4
SYNE3-203ENST00000554873 FOXN1O15353 648 aa17.53■□□□□ 0.4
SYNE3-203ENST00000554873 RANBP6O60518 1105 aaKnown RBP17.53■□□□□ 0.4
SYNE3-203ENST00000554873 SLC8A1P32418 973 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms