RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 MB21D1Q8N884 522 aa29.31■■■□□ 2.28
FOXA1-204ENST00000554607 RHPN1Q8TCX5 695 aa29.31■■■□□ 2.28
FOXA1-204ENST00000554607 SPATC1LQ9H0A9 340 aa29.31■■■□□ 2.28
FOXA1-204ENST00000554607 IL1RAPL2Q9NP60 686 aa29.31■■■□□ 2.28
FOXA1-204ENST00000554607 CYBAP13498 195 aa29.3■■■□□ 2.28
FOXA1-204ENST00000554607 ADORA2AP29274 412 aa29.3■■■□□ 2.28
FOXA1-204ENST00000554607 ATN1P54259 1190 aaPredicted RBP29.3■■■□□ 2.28
FOXA1-204ENST00000554607 TMEM179Q6ZVK1 233 aa29.3■■■□□ 2.28
FOXA1-204ENST00000554607 CLASRPQ8N2M8 674 aaKnown RBP29.3■■■□□ 2.28
FOXA1-204ENST00000554607 TRPV1Q8NER1 839 aa29.3■■■□□ 2.28
FOXA1-204ENST00000554607 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.3■■■□□ 2.28
FOXA1-204ENST00000554607 SWAP70Q9UH65 585 aa29.3■■■□□ 2.28
FOXA1-204ENST00000554607 DNAH12Q6ZR08 3092 aa29.29■■■□□ 2.28
FOXA1-204ENST00000554607 ZNF532Q9HCE3 1301 aa29.29■■■□□ 2.28
FOXA1-204ENST00000554607 FAM109BQ6ICB4 259 aaPredicted RBP29.29■■■□□ 2.28
FOXA1-204ENST00000554607 NAV1Q8NEY1 1877 aa29.29■■■□□ 2.28
FOXA1-204ENST00000554607 ERCC3P19447 782 aa29.28■■■□□ 2.28
FOXA1-204ENST00000554607 MROH8Q9H579 483 aa29.28■■■□□ 2.28
FOXA1-204ENST00000554607 DCP1AQ9NPI6 582 aaPredicted RBP29.28■■■□□ 2.28
FOXA1-204ENST00000554607 RTP1P59025 263 aa29.27■■■□□ 2.28
FOXA1-204ENST00000554607 HNRNPUQ00839 825 aaKnown RBP eCLIP29.27■■■□□ 2.28
FOXA1-204ENST00000554607 SDR42E1Q8WUS8 393 aa29.27■■■□□ 2.28
FOXA1-204ENST00000554607 SH2D4AQ9H788 454 aa29.27■■■□□ 2.28
FOXA1-204ENST00000554607 ARHGEF10LQ9HCE6 1279 aa29.27■■■□□ 2.28
FOXA1-204ENST00000554607 KBTBD13C9JR72 458 aa29.26■■■□□ 2.27
FOXA1-204ENST00000554607 POTEB2H3BUK9 544 aa29.26■■■□□ 2.27
FOXA1-204ENST00000554607 GOLIM4O00461 696 aa29.26■■■□□ 2.27
FOXA1-204ENST00000554607 SEPT4O43236 478 aa29.26■■■□□ 2.27
FOXA1-204ENST00000554607 IFIT2P09913 472 aaKnown RBP29.26■■■□□ 2.27
FOXA1-204ENST00000554607 DSG3P32926 999 aa29.26■■■□□ 2.27
FOXA1-204ENST00000554607 GJC2Q5T442 439 aaPredicted RBP29.26■■■□□ 2.27
FOXA1-204ENST00000554607 ABRAQ8N0Z2 381 aa29.26■■■□□ 2.27
FOXA1-204ENST00000554607 KIF1BPQ96EK5 621 aa29.26■■■□□ 2.27
FOXA1-204ENST00000554607 DNAJC2Q99543 621 aaKnown RBP29.26■■■□□ 2.27
FOXA1-204ENST00000554607 ZNF236Q9UL36 1845 aa29.26■■■□□ 2.27
FOXA1-204ENST00000554607 TCRBV5S4A2TA0A5A2 114 aa29.25■■■□□ 2.27
FOXA1-204ENST00000554607 LCORLQ8N3X6 602 aa29.25■■■□□ 2.27
FOXA1-204ENST00000554607 EVX2Q03828 476 aa29.24■■■□□ 2.27
FOXA1-204ENST00000554607 PLS1Q14651 629 aa29.24■■■□□ 2.27
FOXA1-204ENST00000554607 NCAPG2Q86XI2 1143 aa29.24■■■□□ 2.27
FOXA1-204ENST00000554607 ATP8A2Q9NTI2 1148 aa29.24■■■□□ 2.27
FOXA1-204ENST00000554607 ATP11BQ9Y2G3 1177 aa29.24■■■□□ 2.27
FOXA1-204ENST00000554607 TMX2Q9Y320 296 aa29.24■■■□□ 2.27
FOXA1-204ENST00000554607 COBLO75128 1261 aa29.23■■■□□ 2.27
FOXA1-204ENST00000554607 FLOT1O75955 427 aa29.23■■■□□ 2.27
FOXA1-204ENST00000554607 MS4A1P11836 297 aa29.23■■■□□ 2.27
FOXA1-204ENST00000554607 SLC39A5Q6ZMH5 540 aa29.23■■■□□ 2.27
FOXA1-204ENST00000554607 SLC44A5Q8NCS7 719 aa29.23■■■□□ 2.27
FOXA1-204ENST00000554607 PANK1Q8TE04 598 aa29.23■■■□□ 2.27
FOXA1-204ENST00000554607 CCDC17Q96LX7 622 aa29.23■■■□□ 2.27
FOXA1-204ENST00000554607 HMMRO75330 724 aa29.22■■■□□ 2.27
FOXA1-204ENST00000554607 CYP2D6P10635 497 aa29.22■■■□□ 2.27
FOXA1-204ENST00000554607 ICA1Q05084 483 aa29.22■■■□□ 2.27
FOXA1-204ENST00000554607 RPAP2Q8IXW5 612 aaPredicted RBP29.22■■■□□ 2.27
FOXA1-204ENST00000554607 VCPKMTQ9H867 229 aa29.22■■■□□ 2.27
FOXA1-204ENST00000554607 FCER1AP12319 257 aa29.21■■■□□ 2.27
FOXA1-204ENST00000554607 KIAA1755Q5JYT7 1200 aa29.21■■■□□ 2.27
FOXA1-204ENST00000554607 AMOTL1Q8IY63 956 aa29.21■■■□□ 2.27
FOXA1-204ENST00000554607 DYNLL2Q96FJ2 89 aa29.21■■■□□ 2.27
FOXA1-204ENST00000554607 ARMT1Q9H993 441 aa29.21■■■□□ 2.27
FOXA1-204ENST00000554607 RLFQ13129 1914 aa29.2■■■□□ 2.27
FOXA1-204ENST00000554607 APBB1O00213 710 aa29.2■■■□□ 2.26
FOXA1-204ENST00000554607 WDR46O15213 610 aaKnown RBP29.2■■■□□ 2.26
FOXA1-204ENST00000554607 SLC25A27O95847 323 aa29.2■■■□□ 2.26
FOXA1-204ENST00000554607 AKR1B1P15121 316 aa29.2■■■□□ 2.26
FOXA1-204ENST00000554607 SIAH1Q8IUQ4 282 aa29.2■■■□□ 2.26
FOXA1-204ENST00000554607 SPICE1Q8N0Z3 855 aa29.2■■■□□ 2.26
FOXA1-204ENST00000554607 ATG4CQ96DT6 458 aa29.2■■■□□ 2.26
FOXA1-204ENST00000554607 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.2■■■□□ 2.26
FOXA1-204ENST00000554607 CUL9Q8IWT3 2517 aa29.2■■■□□ 2.26
FOXA1-204ENST00000554607 A0A0G2JMZ2 1700 aa29.2■■■□□ 2.26
FOXA1-204ENST00000554607 RAB11FIP3O75154 756 aa29.19■■■□□ 2.26
FOXA1-204ENST00000554607 MYCNP04198 464 aaPredicted RBP29.19■■■□□ 2.26
FOXA1-204ENST00000554607 ANO1Q5XXA6 986 aa29.19■■■□□ 2.26
FOXA1-204ENST00000554607 DDRGK1Q96HY6 314 aa29.19■■■□□ 2.26
FOXA1-204ENST00000554607 MAML3Q96JK9 1138 aa29.19■■■□□ 2.26
FOXA1-204ENST00000554607 PAG1Q9NWQ8 432 aa29.19■■■□□ 2.26
FOXA1-204ENST00000554607 ADD2P35612 726 aa29.18■■■□□ 2.26
FOXA1-204ENST00000554607 SNX17Q15036 470 aa29.18■■■□□ 2.26
FOXA1-204ENST00000554607 PRAMEF19Q5SWL8 479 aa29.18■■■□□ 2.26
FOXA1-204ENST00000554607 ZNF697Q5TEC3 545 aa29.18■■■□□ 2.26
FOXA1-204ENST00000554607 NRBP1Q9UHY1 535 aa29.18■■■□□ 2.26
FOXA1-204ENST00000554607 MBD4O95243 580 aa29.17■■■□□ 2.26
FOXA1-204ENST00000554607 C12orf60Q5U649 245 aa29.17■■■□□ 2.26
FOXA1-204ENST00000554607 C1orf53Q5VUE5 145 aa29.17■■■□□ 2.26
FOXA1-204ENST00000554607 GUCD1Q96NT3 240 aa29.17■■■□□ 2.26
FOXA1-204ENST00000554607 PRDM5Q9NQX1 630 aaPredicted RBP29.17■■■□□ 2.26
FOXA1-204ENST00000554607 MYH8P13535 1937 aa29.16■■■□□ 2.26
FOXA1-204ENST00000554607 PRKAB2O43741 272 aa29.16■■■□□ 2.26
FOXA1-204ENST00000554607 ADCYAP1R1P41586 468 aa29.16■■■□□ 2.26
FOXA1-204ENST00000554607 CDK8P49336 464 aa29.16■■■□□ 2.26
FOXA1-204ENST00000554607 TMEM132BQ14DG7 1078 aa29.16■■■□□ 2.26
FOXA1-204ENST00000554607 LRRC41Q15345 812 aa29.16■■■□□ 2.26
FOXA1-204ENST00000554607 SAMD1Q6SPF0 538 aaPredicted RBP29.16■■■□□ 2.26
FOXA1-204ENST00000554607 ADAMTS5Q9UNA0 930 aa29.16■■■□□ 2.26
FOXA1-204ENST00000554607 TRIM60Q495X7 471 aa29.15■■■□□ 2.26
FOXA1-204ENST00000554607 CLEC10AQ8IUN9 316 aa29.15■■■□□ 2.26
FOXA1-204ENST00000554607 MMP19Q99542 508 aa29.15■■■□□ 2.26
FOXA1-204ENST00000554607 BCL11AQ9H165 835 aa29.15■■■□□ 2.26
FOXA1-204ENST00000554607 BOLA2Q9H3K6 86 aa29.15■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms