RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 CCDC171Q6TFL3 1326 aa15.55■□□□□ 0.08
SHMT2-211ENST00000554310 GRK4P32298 578 aa15.55■□□□□ 0.08
SHMT2-211ENST00000554310 ERVK-9P63128 1117 aa15.55■□□□□ 0.08
SHMT2-211ENST00000554310 ERVK-24P63145 666 aa15.55■□□□□ 0.08
SHMT2-211ENST00000554310 MLLT1Q03111 559 aaPredicted RBP15.55■□□□□ 0.08
SHMT2-211ENST00000554310 PDE4BQ07343 736 aa15.55■□□□□ 0.08
SHMT2-211ENST00000554310 NMIQ13287 307 aaPredicted RBP15.55■□□□□ 0.08
SHMT2-211ENST00000554310 SIAH1Q8IUQ4 282 aa15.55■□□□□ 0.08
SHMT2-211ENST00000554310 SLAIN1Q8ND83 568 aa15.55■□□□□ 0.08
SHMT2-211ENST00000554310 SH3TC2Q8TF17 1288 aa15.55■□□□□ 0.08
SHMT2-211ENST00000554310 TANGO6Q9C0B7 1094 aa15.55■□□□□ 0.08
SHMT2-211ENST00000554310 VCPKMTQ9H867 229 aa15.55■□□□□ 0.08
SHMT2-211ENST00000554310 RBPJLQ9UBG7 517 aa15.55■□□□□ 0.08
SHMT2-211ENST00000554310 RABGAP1Q9Y3P9 1069 aa15.55■□□□□ 0.08
SHMT2-211ENST00000554310 PLXNB2O15031 1838 aa15.54■□□□□ 0.08
SHMT2-211ENST00000554310 LAMA4Q16363 1823 aa15.54■□□□□ 0.08
SHMT2-211ENST00000554310 SPDYE16A6NNV3 312 aaPredicted RBP15.54■□□□□ 0.08
SHMT2-211ENST00000554310 HIP1O00291 1037 aa15.54■□□□□ 0.08
SHMT2-211ENST00000554310 WDR46O15213 610 aaKnown RBP15.54■□□□□ 0.08
SHMT2-211ENST00000554310 EEF2P13639 858 aaKnown RBP15.54■□□□□ 0.08
SHMT2-211ENST00000554310 SDSP20132 328 aa15.54■□□□□ 0.08
SHMT2-211ENST00000554310 MAPK4P31152 587 aa15.54■□□□□ 0.08
SHMT2-211ENST00000554310 FLT3LGP49771 235 aa15.54■□□□□ 0.08
SHMT2-211ENST00000554310 MFAP1P55081 439 aaKnown RBP15.54■□□□□ 0.08
SHMT2-211ENST00000554310 ALX1Q15699 326 aa15.54■□□□□ 0.08
SHMT2-211ENST00000554310 VPS53Q5VIR6 699 aa15.54■□□□□ 0.08
SHMT2-211ENST00000554310 STK11IPQ8N1F8 1099 aa15.54■□□□□ 0.08
SHMT2-211ENST00000554310 PAGR1Q9BTK6 254 aa15.54■□□□□ 0.08
SHMT2-211ENST00000554310 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.54■□□□□ 0.085e-8■■■□□ 18.8
SHMT2-211ENST00000554310 GOPCQ9HD26 462 aa15.54■□□□□ 0.08
SHMT2-211ENST00000554310 DIAPH3Q9NSV4 1193 aa15.54■□□□□ 0.08
SHMT2-211ENST00000554310 GABRQQ9UN88 632 aa15.54■□□□□ 0.08
SHMT2-211ENST00000554310 CENPFP49454 3210 aa15.54■□□□□ 0.08
SHMT2-211ENST00000554310 PRDM1O75626 825 aa15.53■□□□□ 0.08
SHMT2-211ENST00000554310 PDE4AP27815 886 aa15.53■□□□□ 0.08
SHMT2-211ENST00000554310 CCNA1P78396 465 aa15.53■□□□□ 0.08
SHMT2-211ENST00000554310 ATP2B2Q01814 1243 aa15.53■□□□□ 0.08
SHMT2-211ENST00000554310 ZNF589Q86UQ0 364 aaPredicted RBP15.53■□□□□ 0.08
SHMT2-211ENST00000554310 ZNF444Q8N0Y2 327 aaPredicted RBP15.53■□□□□ 0.08
SHMT2-211ENST00000554310 PXYLP1Q8TE99 480 aa15.53■□□□□ 0.08
SHMT2-211ENST00000554310 SOCS4Q8WXH5 440 aa15.53■□□□□ 0.08
SHMT2-211ENST00000554310 TMEM106CQ9BVX2 250 aa15.53■□□□□ 0.08
SHMT2-211ENST00000554310 NYAP2Q9P242 653 aa15.53■□□□□ 0.08
SHMT2-211ENST00000554310 SYNPO2Q9UMS6 1093 aa15.53■□□□□ 0.08
SHMT2-211ENST00000554310 IGKV6D-41A0A0C4DH26 115 aa15.52■□□□□ 0.08
SHMT2-211ENST00000554310 ADCY3O60266 1144 aa15.52■□□□□ 0.08
SHMT2-211ENST00000554310 COG2Q14746 738 aa15.52■□□□□ 0.08
SHMT2-211ENST00000554310 KIAA1755Q5JYT7 1200 aa15.52■□□□□ 0.08
SHMT2-211ENST00000554310 POTEEQ6S8J3 1075 aa15.52■□□□□ 0.08
SHMT2-211ENST00000554310 CCAR1Q8IX12 1150 aaKnown RBP15.52■□□□□ 0.08
SHMT2-211ENST00000554310 SPICE1Q8N0Z3 855 aa15.52■□□□□ 0.08
SHMT2-211ENST00000554310 HOXC10Q9NYD6 342 aa15.52■□□□□ 0.08
SHMT2-211ENST00000554310 ANAPC4Q9UJX5 808 aa15.52■□□□□ 0.08
SHMT2-211ENST00000554310 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.52■□□□□ 0.08
SHMT2-211ENST00000554310 CNMDO75829 334 aa15.51■□□□□ 0.07
SHMT2-211ENST00000554310 FLOT1O75955 427 aa15.51■□□□□ 0.07
SHMT2-211ENST00000554310 TSPY3P0CV98 308 aa15.51■□□□□ 0.07
SHMT2-211ENST00000554310 TSPY8P0CW00 308 aa15.51■□□□□ 0.07
SHMT2-211ENST00000554310 HSPD1P10809 573 aaKnown RBP15.51■□□□□ 0.07
SHMT2-211ENST00000554310 UBXN2AP68543 259 aa15.51■□□□□ 0.07
SHMT2-211ENST00000554310 PPP4R3BQ5MIZ7 849 aa15.51■□□□□ 0.07
SHMT2-211ENST00000554310 TTC22Q5TAA0 569 aa15.51■□□□□ 0.07
SHMT2-211ENST00000554310 MB21D1Q8N884 522 aa15.51■□□□□ 0.07
SHMT2-211ENST00000554310 NEDD1Q8NHV4 660 aa15.51■□□□□ 0.07
SHMT2-211ENST00000554310 ZNF236Q9UL36 1845 aa15.51■□□□□ 0.07
SHMT2-211ENST00000554310 PEX10O60683 326 aa15.5■□□□□ 0.07
SHMT2-211ENST00000554310 TTLL1O95922 423 aa15.5■□□□□ 0.07
SHMT2-211ENST00000554310 DSG3P32926 999 aa15.5■□□□□ 0.07
SHMT2-211ENST00000554310 Q3C1V9 767 aa15.5■□□□□ 0.07
SHMT2-211ENST00000554310 GPR142Q7Z601 462 aa15.5■□□□□ 0.07
SHMT2-211ENST00000554310 CEP95Q96GE4 821 aa15.5■□□□□ 0.07
SHMT2-211ENST00000554310 PORCNQ9H237 461 aa15.5■□□□□ 0.07
SHMT2-211ENST00000554310 MTMR4Q9NYA4 1195 aa15.5■□□□□ 0.07
SHMT2-211ENST00000554310 BIN2Q9UBW5 565 aaPredicted RBP15.5■□□□□ 0.07
SHMT2-211ENST00000554310 GJD2Q9UKL4 321 aa15.5■□□□□ 0.07
SHMT2-211ENST00000554310 POTEFA5A3E0 1075 aa15.49■□□□□ 0.07
SHMT2-211ENST00000554310 ORC4O43929 436 aa15.49■□□□□ 0.07
SHMT2-211ENST00000554310 FGAP02671 866 aa15.49■□□□□ 0.07
SHMT2-211ENST00000554310 GSPT1P15170 499 aaKnown RBP15.49■□□□□ 0.07
SHMT2-211ENST00000554310 ELNP15502 786 aa15.49■□□□□ 0.07
SHMT2-211ENST00000554310 CTDSPL2Q05D32 466 aa15.49■□□□□ 0.07
SHMT2-211ENST00000554310 CWC27Q6UX04 472 aaKnown RBP15.49■□□□□ 0.07
SHMT2-211ENST00000554310 PLEKHH3Q7Z736 793 aa15.49■□□□□ 0.07
SHMT2-211ENST00000554310 NUDT12Q9BQG2 462 aa15.49■□□□□ 0.07
SHMT2-211ENST00000554310 CWC22Q9HCG8 908 aaKnown RBP15.49■□□□□ 0.07
SHMT2-211ENST00000554310 BTBD7Q9P203 1132 aa15.49■□□□□ 0.07
SHMT2-211ENST00000554310 COL11A1P12107 1806 aaPredicted RBP15.49■□□□□ 0.07
SHMT2-211ENST00000554310 TSPY2A6NKD2 308 aa15.48■□□□□ 0.07
SHMT2-211ENST00000554310 RAD21O60216 631 aa15.48■□□□□ 0.07
SHMT2-211ENST00000554310 NDUFB10O96000 172 aa15.48■□□□□ 0.07
SHMT2-211ENST00000554310 HMGCRP04035 888 aa15.48■□□□□ 0.07
SHMT2-211ENST00000554310 INHAP05111 366 aa15.48■□□□□ 0.07
SHMT2-211ENST00000554310 FGRP09769 529 aa15.48■□□□□ 0.07
SHMT2-211ENST00000554310 PCP11498 1178 aaKnown RBP15.48■□□□□ 0.07
SHMT2-211ENST00000554310 XRCC5P13010 732 aaKnown RBP15.48■□□□□ 0.07
SHMT2-211ENST00000554310 TFAP4Q01664 338 aa15.48■□□□□ 0.07
SHMT2-211ENST00000554310 FAM83BQ5T0W9 1011 aa15.48■□□□□ 0.07
SHMT2-211ENST00000554310 GMCL1P1Q8NEA9 526 aa15.48■□□□□ 0.07
SHMT2-211ENST00000554310 SHCBP1Q8NEM2 672 aa15.48■□□□□ 0.07
SHMT2-211ENST00000554310 MKL1Q969V6 931 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms