RNA–Protein interactions for RNA: ENST00000553531.1

PTPN21-203, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 3

Gene PTPN21, Length 704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-203ENST00000553531 LBX2Q6XYB7 198 aa14.29□□□□□ -0.12
PTPN21-203ENST00000553531 PORCNQ9H237 461 aa14.29□□□□□ -0.12
PTPN21-203ENST00000553531 RPAP3Q9H6T3 665 aaPredicted RBP14.29□□□□□ -0.12
PTPN21-203ENST00000553531 HELLSQ9NRZ9 838 aa14.29□□□□□ -0.12
PTPN21-203ENST00000553531 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.29□□□□□ -0.12
PTPN21-203ENST00000553531 PLIN4Q96Q06 1357 aa14.29□□□□□ -0.12
PTPN21-203ENST00000553531 TNPO2O14787 897 aaKnown RBP14.28□□□□□ -0.12
PTPN21-203ENST00000553531 PRDM1O75626 825 aa14.28□□□□□ -0.12
PTPN21-203ENST00000553531 MYCNP04198 464 aaPredicted RBP14.28□□□□□ -0.12
PTPN21-203ENST00000553531 APPP05067 770 aa14.28□□□□□ -0.12
PTPN21-203ENST00000553531 ERVK-9P63128 1117 aa14.28□□□□□ -0.12
PTPN21-203ENST00000553531 ERVK-24P63145 666 aa14.28□□□□□ -0.12
PTPN21-203ENST00000553531 PPARAQ07869 468 aa14.28□□□□□ -0.12
PTPN21-203ENST00000553531 IRF5Q13568 498 aa14.28□□□□□ -0.12
PTPN21-203ENST00000553531 VCPKMTQ9H867 229 aa14.28□□□□□ -0.12
PTPN21-203ENST00000553531 KANSL2Q9H9L4 492 aa14.28□□□□□ -0.12
PTPN21-203ENST00000553531 BTBD7Q9P203 1132 aa14.28□□□□□ -0.12
PTPN21-203ENST00000553531 ZNF236Q9UL36 1845 aa14.27□□□□□ -0.12
PTPN21-203ENST00000553531 GSPT1P15170 499 aaKnown RBP14.27□□□□□ -0.13
PTPN21-203ENST00000553531 SDSP20132 328 aa14.27□□□□□ -0.13
PTPN21-203ENST00000553531 HOXD10P28358 340 aa14.27□□□□□ -0.13
PTPN21-203ENST00000553531 GRK4P32298 578 aa14.27□□□□□ -0.13
PTPN21-203ENST00000553531 MLLT1Q03111 559 aaPredicted RBP14.27□□□□□ -0.13
PTPN21-203ENST00000553531 MTFR1Q15390 333 aa14.27□□□□□ -0.13
PTPN21-203ENST00000553531 ALX1Q15699 326 aa14.27□□□□□ -0.13
PTPN21-203ENST00000553531 MCMDC2Q4G0Z9 681 aa14.27□□□□□ -0.13
PTPN21-203ENST00000553531 SPICE1Q8N0Z3 855 aa14.27□□□□□ -0.13
PTPN21-203ENST00000553531 GPRC5AQ8NFJ5 357 aa14.27□□□□□ -0.13
PTPN21-203ENST00000553531 NAPBQ9H115 298 aa14.27□□□□□ -0.13
PTPN21-203ENST00000553531 IL25Q9H293 177 aa14.27□□□□□ -0.13
PTPN21-203ENST00000553531 ARHGEF10LQ9HCE6 1279 aa14.27□□□□□ -0.13
PTPN21-203ENST00000553531 INCENPQ9NQS7 918 aa14.27□□□□□ -0.13
PTPN21-203ENST00000553531 PDE4DIPQ5VU43 2346 aa14.26□□□□□ -0.13
PTPN21-203ENST00000553531 TRIM6-TRIM34B2RNG4 842 aa14.26□□□□□ -0.13
PTPN21-203ENST00000553531 ELNP15502 786 aa14.26□□□□□ -0.13
PTPN21-203ENST00000553531 NKX2-3Q8TAU0 364 aa14.26□□□□□ -0.13
PTPN21-203ENST00000553531 RAET1EQ8TD07 263 aa14.26□□□□□ -0.13
PTPN21-203ENST00000553531 LPAR1Q92633 364 aa14.26□□□□□ -0.13
PTPN21-203ENST00000553531 USP6NLQ92738 828 aa14.26□□□□□ -0.13
PTPN21-203ENST00000553531 RILPL2Q969X0 211 aa14.26□□□□□ -0.13
PTPN21-203ENST00000553531 PAGR1Q9BTK6 254 aa14.26□□□□□ -0.13
PTPN21-203ENST00000553531 NACAP1Q9BZK3 213 aa14.26□□□□□ -0.13
PTPN21-203ENST00000553531 NBPF3Q9H094 633 aa14.26□□□□□ -0.13
PTPN21-203ENST00000553531 NYAP2Q9P242 653 aa14.26□□□□□ -0.13
PTPN21-203ENST00000553531 ANAPC4Q9UJX5 808 aa14.26□□□□□ -0.13
PTPN21-203ENST00000553531 RABGAP1Q9Y3P9 1069 aa14.26□□□□□ -0.13
PTPN21-203ENST00000553531 ZMYM6O95789 1325 aa14.25□□□□□ -0.13
PTPN21-203ENST00000553531 CCDC171Q6TFL3 1326 aa14.25□□□□□ -0.13
PTPN21-203ENST00000553531 ADCY3O60266 1144 aa14.25□□□□□ -0.13
PTPN21-203ENST00000553531 FGAP02671 866 aa14.25□□□□□ -0.13
PTPN21-203ENST00000553531 FGRP09769 529 aa14.25□□□□□ -0.13
PTPN21-203ENST00000553531 HSPD1P10809 573 aaKnown RBP14.25□□□□□ -0.13
PTPN21-203ENST00000553531 EN2P19622 333 aaPredicted RBP14.25□□□□□ -0.13
PTPN21-203ENST00000553531 CTDSPL2Q05D32 466 aa14.25□□□□□ -0.13
PTPN21-203ENST00000553531 SLAIN1Q8ND83 568 aa14.25□□□□□ -0.13
PTPN21-203ENST00000553531 PXYLP1Q8TE99 480 aa14.25□□□□□ -0.13
PTPN21-203ENST00000553531 GTF3C2Q8WUA4 911 aaPredicted RBP14.25□□□□□ -0.13
PTPN21-203ENST00000553531 SHISA4Q96DD7 197 aa14.25□□□□□ -0.13
PTPN21-203ENST00000553531 CEP95Q96GE4 821 aa14.25□□□□□ -0.13
PTPN21-203ENST00000553531 MKNK2Q9HBH9 465 aa14.25□□□□□ -0.13
PTPN21-203ENST00000553531 MKI67P46013 3256 aaKnown RBP14.24□□□□□ -0.13
PTPN21-203ENST00000553531 ZNFX1Q9P2E3 1918 aaKnown RBP14.24□□□□□ -0.13
PTPN21-203ENST00000553531 WDR46O15213 610 aaKnown RBP14.24□□□□□ -0.13
PTPN21-203ENST00000553531 MYCP01106 439 aaPredicted RBP14.24□□□□□ -0.13
PTPN21-203ENST00000553531 DSG3P32926 999 aa14.24□□□□□ -0.13
PTPN21-203ENST00000553531 COG2Q14746 738 aa14.24□□□□□ -0.13
PTPN21-203ENST00000553531 FAM47AQ5JRC9 791 aa14.24□□□□□ -0.13
PTPN21-203ENST00000553531 TTC22Q5TAA0 569 aa14.24□□□□□ -0.13
PTPN21-203ENST00000553531 NBPF11Q86T75 865 aa14.24□□□□□ -0.13
PTPN21-203ENST00000553531 NEDD1Q8NHV4 660 aa14.24□□□□□ -0.13
PTPN21-203ENST00000553531 COA7Q96BR5 231 aa14.24□□□□□ -0.13
PTPN21-203ENST00000553531 TANGO6Q9C0B7 1094 aa14.24□□□□□ -0.13
PTPN21-203ENST00000553531 FBXO28Q9NVF7 368 aa14.24□□□□□ -0.13
PTPN21-203ENST00000553531 MTMR4Q9NYA4 1195 aa14.24□□□□□ -0.13
PTPN21-203ENST00000553531 ADAMTS5Q9UNA0 930 aa14.24□□□□□ -0.13
PTPN21-203ENST00000553531 FRMPD3Q5JV73 1810 aa14.23□□□□□ -0.13
PTPN21-203ENST00000553531 ATP2B2Q01814 1243 aa14.23□□□□□ -0.13
PTPN21-203ENST00000553531 MORN1Q5T089 497 aa14.23□□□□□ -0.13
PTPN21-203ENST00000553531 GPR142Q7Z601 462 aa14.23□□□□□ -0.13
PTPN21-203ENST00000553531 TRIB2Q92519 343 aa14.23□□□□□ -0.13
PTPN21-203ENST00000553531 MKL1Q969V6 931 aa14.23□□□□□ -0.13
PTPN21-203ENST00000553531 ATG4CQ96DT6 458 aa14.23□□□□□ -0.13
PTPN21-203ENST00000553531 NUP88Q99567 741 aaPredicted RBP14.23□□□□□ -0.13
PTPN21-203ENST00000553531 SH2D4AQ9H788 454 aa14.23□□□□□ -0.13
PTPN21-203ENST00000553531 IL17RBQ9NRM6 502 aa14.23□□□□□ -0.13
PTPN21-203ENST00000553531 ORC4O43929 436 aa14.22□□□□□ -0.13
PTPN21-203ENST00000553531 NDUFB10O96000 172 aa14.22□□□□□ -0.13
PTPN21-203ENST00000553531 INHAP05111 366 aa14.22□□□□□ -0.13
PTPN21-203ENST00000553531 CCL5P13501 91 aa14.22□□□□□ -0.13
PTPN21-203ENST00000553531 MAPK4P31152 587 aa14.22□□□□□ -0.13
PTPN21-203ENST00000553531 NOVP48745 357 aa14.22□□□□□ -0.13
PTPN21-203ENST00000553531 TFAP4Q01664 338 aa14.22□□□□□ -0.13
PTPN21-203ENST00000553531 PDE4BQ07343 736 aa14.22□□□□□ -0.13
PTPN21-203ENST00000553531 TRIM32Q13049 653 aa14.22□□□□□ -0.13
PTPN21-203ENST00000553531 FAM83BQ5T0W9 1011 aa14.22□□□□□ -0.13
PTPN21-203ENST00000553531 TBC1D10CQ8IV04 446 aa14.22□□□□□ -0.13
PTPN21-203ENST00000553531 ZNF444Q8N0Y2 327 aaPredicted RBP14.22□□□□□ -0.13
PTPN21-203ENST00000553531 REPS2Q8NFH8 660 aa14.22□□□□□ -0.13
PTPN21-203ENST00000553531 MOV10L1Q9BXT6 1211 aaKnown RBP14.22□□□□□ -0.13
PTPN21-203ENST00000553531 UNC93B1Q9H1C4 597 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms