RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 QRICH2Q9H0J4 1663 aa6.53□□□□□ -1.36
ATXN3-220ENST00000553491 FAM95CA0A1B0GW59 222 aa6.53□□□□□ -1.36
ATXN3-220ENST00000553491 ENC1O14682 589 aa6.53□□□□□ -1.36
ATXN3-220ENST00000553491 TMPRSS2O15393 492 aa6.53□□□□□ -1.36
ATXN3-220ENST00000553491 F13BP05160 661 aa6.53□□□□□ -1.36
ATXN3-220ENST00000553491 BMP6P22004 513 aa6.53□□□□□ -1.36
ATXN3-220ENST00000553491 GSTT1P30711 240 aa6.53□□□□□ -1.36
ATXN3-220ENST00000553491 USP11P51784 963 aa6.53□□□□□ -1.36
ATXN3-220ENST00000553491 FANCCQ00597 558 aa6.53□□□□□ -1.36
ATXN3-220ENST00000553491 PPP2R3AQ06190 1150 aa6.53□□□□□ -1.36
ATXN3-220ENST00000553491 ZNF252P-AS1Q0IIN9 211 aa6.53□□□□□ -1.36
ATXN3-220ENST00000553491 KIF4BQ2VIQ3 1234 aa6.53□□□□□ -1.36
ATXN3-220ENST00000553491 C9orf131Q5VYM1 1079 aa6.53□□□□□ -1.36
ATXN3-220ENST00000553491 BRINP3Q76B58 766 aa6.53□□□□□ -1.36
ATXN3-220ENST00000553491 SHKBP1Q8TBC3 707 aa6.53□□□□□ -1.36
ATXN3-220ENST00000553491 MFSD14AQ96MC6 490 aa6.53□□□□□ -1.36
ATXN3-220ENST00000553491 CDK19Q9BWU1 502 aa6.53□□□□□ -1.36
ATXN3-220ENST00000553491 ZC3H12CQ9C0D7 883 aaKnown RBP6.53□□□□□ -1.36
ATXN3-220ENST00000553491 SEMA6CQ9H3T2 930 aa6.53□□□□□ -1.36
ATXN3-220ENST00000553491 RAD18Q9NS91 495 aa6.53□□□□□ -1.36
ATXN3-220ENST00000553491 CRIM1Q9NZV1 1036 aa6.53□□□□□ -1.36
ATXN3-220ENST00000553491 GPN3Q9UHW5 284 aaPredicted RBP6.53□□□□□ -1.36
ATXN3-220ENST00000553491 ROCK2O75116 1388 aaKnown RBP6.53□□□□□ -1.36
ATXN3-220ENST00000553491 FAM135BQ49AJ0 1406 aa6.52□□□□□ -1.37
ATXN3-220ENST00000553491 ADGRL3Q9HAR2 1447 aa6.52□□□□□ -1.37
ATXN3-220ENST00000553491 ASXL1Q8IXJ9 1541 aa6.52□□□□□ -1.37
ATXN3-220ENST00000553491 KIAA1324LA8MWY0 1029 aaPredicted RBP6.52□□□□□ -1.37
ATXN3-220ENST00000553491 PAGE1O75459 146 aa6.52□□□□□ -1.37
ATXN3-220ENST00000553491 NME2P22392 152 aa6.52□□□□□ -1.37
ATXN3-220ENST00000553491 ARNTP27540 789 aa6.52□□□□□ -1.37
ATXN3-220ENST00000553491 ADMP35318 185 aa6.52□□□□□ -1.37
ATXN3-220ENST00000553491 PDE3AQ14432 1141 aa6.52□□□□□ -1.37
ATXN3-220ENST00000553491 MEI1Q5TIA1 1274 aa6.52□□□□□ -1.37
ATXN3-220ENST00000553491 METTL16Q86W50 562 aaKnown RBP6.52□□□□□ -1.37
ATXN3-220ENST00000553491 SULF2Q8IWU5 870 aa6.52□□□□□ -1.37
ATXN3-220ENST00000553491 NGDNQ8NEJ9 315 aaKnown RBP6.52□□□□□ -1.37
ATXN3-220ENST00000553491 PRKAG2Q9UGJ0 569 aa6.52□□□□□ -1.37
ATXN3-220ENST00000553491 PPM1HQ9ULR3 514 aa6.52□□□□□ -1.37
ATXN3-220ENST00000553491 USP31Q70CQ4 1352 aa6.52□□□□□ -1.37
ATXN3-220ENST00000553491 NRXN1Q9ULB1 1477 aa6.52□□□□□ -1.37
ATXN3-220ENST00000553491 PRAG1Q86YV5 1406 aa6.51□□□□□ -1.37
ATXN3-220ENST00000553491 ITSN1Q15811 1721 aa6.51□□□□□ -1.37
ATXN3-220ENST00000553491 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.51□□□□□ -1.37
ATXN3-220ENST00000553491 NFICP08651 508 aa6.51□□□□□ -1.37
ATXN3-220ENST00000553491 RXRBP28702 533 aa6.51□□□□□ -1.37
ATXN3-220ENST00000553491 SSTR4P31391 388 aa6.51□□□□□ -1.37
ATXN3-220ENST00000553491 NFKBIBQ15653 356 aa6.51□□□□□ -1.37
ATXN3-220ENST00000553491 RASIP1Q5U651 963 aa6.51□□□□□ -1.37
ATXN3-220ENST00000553491 MPRIPQ6WCQ1 1025 aa6.51□□□□□ -1.37
ATXN3-220ENST00000553491 DYMQ7RTS9 669 aa6.51□□□□□ -1.37
ATXN3-220ENST00000553491 KRT28Q7Z3Y7 464 aa6.51□□□□□ -1.37
ATXN3-220ENST00000553491 LRRC59Q96AG4 307 aaKnown RBP6.51□□□□□ -1.37
ATXN3-220ENST00000553491 FANCD2OSQ96PS1 177 aa6.51□□□□□ -1.37
ATXN3-220ENST00000553491 POLR3GLQ9BT43 218 aa6.51□□□□□ -1.37
ATXN3-220ENST00000553491 DISC1Q9NRI5 854 aa6.51□□□□□ -1.37
ATXN3-220ENST00000553491 METTL5Q9NRN9 209 aaKnown RBP6.51□□□□□ -1.37
ATXN3-220ENST00000553491 C1GALT1Q9NS00 363 aa6.51□□□□□ -1.37
ATXN3-220ENST00000553491 KAT6BQ8WYB5 2073 aa6.51□□□□□ -1.37
ATXN3-220ENST00000553491 CENPJQ9HC77 1338 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-220ENST00000553491 MST1RQ04912 1400 aa6.5□□□□□ -1.37
ATXN3-220ENST00000553491 PTCH1Q13635 1447 aa6.5□□□□□ -1.37
ATXN3-220ENST00000553491 C1orf167Q5SNV9 1468 aa6.5□□□□□ -1.37
ATXN3-220ENST00000553491 WDR64B1ANS9 1081 aa6.5□□□□□ -1.37
ATXN3-220ENST00000553491 DYNC1LI2O43237 492 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-220ENST00000553491 COBLO75128 1261 aa6.5□□□□□ -1.37
ATXN3-220ENST00000553491 ASPAP45381 313 aa6.5□□□□□ -1.37
ATXN3-220ENST00000553491 TAF1CQ15572 869 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-220ENST00000553491 PAOXQ6QHF9 649 aa6.5□□□□□ -1.37
ATXN3-220ENST00000553491 TPTE2Q6XPS3 522 aa6.5□□□□□ -1.37
ATXN3-220ENST00000553491 ZAR1Q86SH2 424 aa6.5□□□□□ -1.37
ATXN3-220ENST00000553491 RNF34Q969K3 372 aa6.5□□□□□ -1.37
ATXN3-220ENST00000553491 AP4E1Q9UPM8 1137 aa6.5□□□□□ -1.37
ATXN3-220ENST00000553491 NHSL1Q5SYE7 1610 aa6.5□□□□□ -1.37
ATXN3-220ENST00000553491 ADGRB1O14514 1584 aa6.49□□□□□ -1.37
ATXN3-220ENST00000553491 ADAMTS4O75173 837 aa6.49□□□□□ -1.37
ATXN3-220ENST00000553491 FBXO24O75426 580 aa6.49□□□□□ -1.37
ATXN3-220ENST00000553491 SPINK2P20155 84 aa6.49□□□□□ -1.37
ATXN3-220ENST00000553491 HOXA10P31260 410 aaPredicted RBP6.49□□□□□ -1.37
ATXN3-220ENST00000553491 ZNF76P36508 570 aa6.49□□□□□ -1.37
ATXN3-220ENST00000553491 ID3Q02535 119 aa6.49□□□□□ -1.37
ATXN3-220ENST00000553491 RAD51AP2Q09MP3 1159 aa6.49□□□□□ -1.37
ATXN3-220ENST00000553491 NT5DC4Q86YG4 428 aa6.49□□□□□ -1.37
ATXN3-220ENST00000553491 GRIN3AQ8TCU5 1115 aa6.49□□□□□ -1.37
ATXN3-220ENST00000553491 SLFN14P0C7P3 912 aa6.48□□□□□ -1.37
ATXN3-220ENST00000553491 RAB6AP20340 208 aa6.48□□□□□ -1.37
ATXN3-220ENST00000553491 ERCC5P28715 1186 aaPredicted RBP6.48□□□□□ -1.37
ATXN3-220ENST00000553491 ST13P50502 369 aaKnown RBP6.48□□□□□ -1.37
ATXN3-220ENST00000553491 ZC3H12AQ5D1E8 599 aaKnown RBP6.48□□□□□ -1.37
ATXN3-220ENST00000553491 DTX1Q86Y01 620 aa6.48□□□□□ -1.37
ATXN3-220ENST00000553491 FBXL6Q8N531 539 aa6.48□□□□□ -1.37
ATXN3-220ENST00000553491 GPBAR1Q8TDU6 330 aa6.48□□□□□ -1.37
ATXN3-220ENST00000553491 KCNB2Q92953 911 aa6.48□□□□□ -1.37
ATXN3-220ENST00000553491 YIPF2Q9BWQ6 316 aa6.48□□□□□ -1.37
ATXN3-220ENST00000553491 EMILIN2Q9BXX0 1053 aa6.48□□□□□ -1.37
ATXN3-220ENST00000553491 CEP44Q9C0F1 390 aa6.48□□□□□ -1.37
ATXN3-220ENST00000553491 DLC1Q96QB1 1528 aa6.48□□□□□ -1.37
ATXN3-220ENST00000553491 TECPR2O15040 1411 aa6.48□□□□□ -1.37
ATXN3-220ENST00000553491 DCCP43146 1447 aa6.48□□□□□ -1.37
ATXN3-220ENST00000553491 KIF1AQ12756 1690 aa6.48□□□□□ -1.37
ATXN3-220ENST00000553491 CDC42BPGQ6DT37 1551 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms