RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 KIAA1324LA8MWY0 1029 aaPredicted RBP7.22□□□□□ -1.25
SCFD1-209ENST00000553280 ADMP35318 185 aa7.22□□□□□ -1.25
SCFD1-209ENST00000553280 CCNFP41002 786 aa7.22□□□□□ -1.25
SCFD1-209ENST00000553280 GYS2P54840 703 aa7.22□□□□□ -1.25
SCFD1-209ENST00000553280 ETF1P62495 437 aaKnown RBP7.22□□□□□ -1.25
SCFD1-209ENST00000553280 SSRP1Q08945 709 aaKnown RBP7.22□□□□□ -1.25
SCFD1-209ENST00000553280 INTS5Q6P9B9 1019 aaKnown RBP7.22□□□□□ -1.25
SCFD1-209ENST00000553280 GIMAP7Q8NHV1 300 aa7.22□□□□□ -1.25
SCFD1-209ENST00000553280 ACSF2Q96CM8 615 aaPredicted RBP7.22□□□□□ -1.25
SCFD1-209ENST00000553280 TBC1D32Q96NH3 1257 aa7.22□□□□□ -1.25
SCFD1-209ENST00000553280 OSBPL1AQ9BXW6 950 aa7.22□□□□□ -1.25
SCFD1-209ENST00000553280 FAM105AQ9NUU6 356 aa7.22□□□□□ -1.25
SCFD1-209ENST00000553280 ADAMTS4O75173 837 aa7.21□□□□□ -1.26
SCFD1-209ENST00000553280 ASPAP45381 313 aa7.21□□□□□ -1.26
SCFD1-209ENST00000553280 ID3Q02535 119 aa7.21□□□□□ -1.26
SCFD1-209ENST00000553280 PPM1JQ5JR12 505 aa7.21□□□□□ -1.26
SCFD1-209ENST00000553280 ZBTB37Q5TC79 503 aa7.21□□□□□ -1.26
SCFD1-209ENST00000553280 SLFN12Q8IYM2 578 aa7.21□□□□□ -1.26
SCFD1-209ENST00000553280 SYNPOQ8N3V7 929 aa7.21□□□□□ -1.26
SCFD1-209ENST00000553280 EZH1Q92800 747 aaPredicted RBP7.21□□□□□ -1.26
SCFD1-209ENST00000553280 FEZ1Q99689 392 aa7.21□□□□□ -1.26
SCFD1-209ENST00000553280 EPN3Q9H201 632 aa7.21□□□□□ -1.26
SCFD1-209ENST00000553280 LGR6Q9HBX8 967 aa7.21□□□□□ -1.26
SCFD1-209ENST00000553280 PIM2Q9P1W9 311 aa7.21□□□□□ -1.26
SCFD1-209ENST00000553280 TJP2Q9UDY2 1190 aa7.21□□□□□ -1.26
SCFD1-209ENST00000553280 KLHL3Q9UH77 587 aa7.21□□□□□ -1.26
SCFD1-209ENST00000553280 ZNF214Q9UL59 606 aaPredicted RBP7.21□□□□□ -1.26
SCFD1-209ENST00000553280 RAG1P15918 1043 aa7.2□□□□□ -1.26
SCFD1-209ENST00000553280 SPINK2P20155 84 aa7.2□□□□□ -1.26
SCFD1-209ENST00000553280 YARSP54577 528 aaKnown RBP7.2□□□□□ -1.26
SCFD1-209ENST00000553280 SLC7A5Q01650 507 aa7.2□□□□□ -1.26
SCFD1-209ENST00000553280 LONRF2Q1L5Z9 754 aa7.2□□□□□ -1.26
SCFD1-209ENST00000553280 TAF7LQ5H9L4 462 aa7.2□□□□□ -1.26
SCFD1-209ENST00000553280 KIAA1211LQ6NV74 962 aa7.2□□□□□ -1.26
SCFD1-209ENST00000553280 HID1Q8IV36 788 aa7.2□□□□□ -1.26
SCFD1-209ENST00000553280 MRPL41Q8IXM3 137 aaKnown RBP7.2□□□□□ -1.26
SCFD1-209ENST00000553280 ZNF507Q8TCN5 953 aa7.2□□□□□ -1.26
SCFD1-209ENST00000553280 KLHL6Q8WZ60 621 aa7.2□□□□□ -1.26
SCFD1-209ENST00000553280 DHRS1Q96LJ7 313 aa7.2□□□□□ -1.26
SCFD1-209ENST00000553280 SPATA9Q9BWV2 254 aa7.2□□□□□ -1.26
SCFD1-209ENST00000553280 SEMA6CQ9H3T2 930 aa7.2□□□□□ -1.26
SCFD1-209ENST00000553280 DISC1Q9NRI5 854 aa7.2□□□□□ -1.26
SCFD1-209ENST00000553280 CRIM1Q9NZV1 1036 aa7.2□□□□□ -1.26
SCFD1-209ENST00000553280 PPP1R9AQ9ULJ8 1098 aa7.2□□□□□ -1.26
SCFD1-209ENST00000553280 PCDHB10Q9UN67 800 aa7.2□□□□□ -1.26
SCFD1-209ENST00000553280 COL4A3BPQ9Y5P4 624 aa7.2□□□□□ -1.26
SCFD1-209ENST00000553280 PTCH2Q9Y6C5 1203 aa7.2□□□□□ -1.26
SCFD1-209ENST00000553280 FAM170BA6NMN3 283 aa7.19□□□□□ -1.26
SCFD1-209ENST00000553280 TMPRSS2O15393 492 aa7.19□□□□□ -1.26
SCFD1-209ENST00000553280 NTF4P34130 210 aa7.19□□□□□ -1.26
SCFD1-209ENST00000553280 GP2P55259 537 aaKnown RBP7.19□□□□□ -1.26
SCFD1-209ENST00000553280 ANAPC15P60006 121 aa7.19□□□□□ -1.26
SCFD1-209ENST00000553280 MAP7Q14244 749 aa7.19□□□□□ -1.26
SCFD1-209ENST00000553280 TCEA2Q15560 299 aa7.19□□□□□ -1.26
SCFD1-209ENST00000553280 GNPTABQ3T906 1256 aa7.19□□□□□ -1.26
SCFD1-209ENST00000553280 SLC6A19Q695T7 634 aa7.19□□□□□ -1.26
SCFD1-209ENST00000553280 ZAR1Q86SH2 424 aa7.19□□□□□ -1.26
SCFD1-209ENST00000553280 DTX1Q86Y01 620 aa7.19□□□□□ -1.26
SCFD1-209ENST00000553280 RNF214Q8ND24 703 aa7.19□□□□□ -1.26
SCFD1-209ENST00000553280 FAM13CQ8NE31 585 aa7.19□□□□□ -1.26
SCFD1-209ENST00000553280 TMEM87BQ96K49 555 aa7.19□□□□□ -1.26
SCFD1-209ENST00000553280 KRTAP9-2Q9BYQ4 174 aa7.19□□□□□ -1.26
SCFD1-209ENST00000553280 ACSS3Q9H6R3 686 aa7.19□□□□□ -1.26
SCFD1-209ENST00000553280 PCDH12Q9NPG4 1184 aa7.19□□□□□ -1.26
SCFD1-209ENST00000553280 PICK1Q9NRD5 415 aa7.19□□□□□ -1.26
SCFD1-209ENST00000553280 DAGLAQ9Y4D2 1042 aa7.19□□□□□ -1.26
SCFD1-209ENST00000553280 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.18□□□□□ -1.26
SCFD1-209ENST00000553280 IQCA1LA6NCM1 817 aa7.18□□□□□ -1.26
SCFD1-209ENST00000553280 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.18□□□□□ -1.26
SCFD1-209ENST00000553280 RGS13O14921 159 aa7.18□□□□□ -1.26
SCFD1-209ENST00000553280 SUSD5O60279 629 aa7.18□□□□□ -1.26
SCFD1-209ENST00000553280 FAM153BP0C7A2 387 aa7.18□□□□□ -1.26
SCFD1-209ENST00000553280 SLC10A6Q3KNW5 377 aa7.18□□□□□ -1.26
SCFD1-209ENST00000553280 TKFCQ3LXA3 575 aa7.18□□□□□ -1.26
SCFD1-209ENST00000553280 BBS9Q3SYG4 887 aa7.18□□□□□ -1.26
SCFD1-209ENST00000553280 ZC3H12BQ5HYM0 836 aaKnown RBP7.18□□□□□ -1.26
SCFD1-209ENST00000553280 ZBTB38Q8NAP3 1195 aaPredicted RBP7.18□□□□□ -1.26
SCFD1-209ENST00000553280 ZSWIM2Q8NEG5 633 aa7.18□□□□□ -1.26
SCFD1-209ENST00000553280 OAS3Q9Y6K5 1087 aaKnown RBP7.18□□□□□ -1.26
SCFD1-209ENST00000553280 FAM86C2PA6NEL3 165 aa7.17□□□□□ -1.26
SCFD1-209ENST00000553280 DYNC1LI2O43237 492 aaPredicted RBP7.17□□□□□ -1.26
SCFD1-209ENST00000553280 ADCY3O60266 1144 aa7.17□□□□□ -1.26
SCFD1-209ENST00000553280 POLR2BP30876 1174 aaKnown RBP7.17□□□□□ -1.26
SCFD1-209ENST00000553280 MASP1P48740 699 aa7.17□□□□□ -1.26
SCFD1-209ENST00000553280 PMS1P54277 932 aaKnown RBP7.17□□□□□ -1.26
SCFD1-209ENST00000553280 LRRC47Q8N1G4 583 aaKnown RBP7.17□□□□□ -1.26
SCFD1-209ENST00000553280 GATA6Q92908 595 aa7.17□□□□□ -1.26
SCFD1-209ENST00000553280 SGSM3Q96HU1 749 aa7.17□□□□□ -1.26
SCFD1-209ENST00000553280 FANCD2OSQ96PS1 177 aa7.17□□□□□ -1.26
SCFD1-209ENST00000553280 SLC26A8Q96RN1 970 aa7.17□□□□□ -1.26
SCFD1-209ENST00000553280 FBRSQ9HAH7 460 aa7.17□□□□□ -1.26
SCFD1-209ENST00000553280 ASMTLO95671 621 aa7.16□□□□□ -1.26
SCFD1-209ENST00000553280 WNT11O96014 354 aa7.16□□□□□ -1.26
SCFD1-209ENST00000553280 FOSL1P15407 271 aa7.16□□□□□ -1.26
SCFD1-209ENST00000553280 CAP2P40123 477 aa7.16□□□□□ -1.26
SCFD1-209ENST00000553280 ZNF143P52747 638 aaPredicted RBP7.16□□□□□ -1.26
SCFD1-209ENST00000553280 TMEM67Q5HYA8 995 aa7.16□□□□□ -1.26
SCFD1-209ENST00000553280 CDC37L1Q7L3B6 337 aa7.16□□□□□ -1.26
SCFD1-209ENST00000553280 TMEM192Q8IY95 271 aa7.16□□□□□ -1.26
SCFD1-209ENST00000553280 PHACTR4Q8IZ21 702 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms