RNA–Protein interactions for RNA: ENST00000552812.1

CACNB3-224, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

Gene CACNB3, Length 1,712 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-224ENST00000552812 FMNL1O95466 1100 aaPredicted RBP13.11□□□□□ -0.31
CACNB3-224ENST00000552812 SHMT1P34896 483 aa13.11□□□□□ -0.31
CACNB3-224ENST00000552812 SSRP1Q08945 709 aaKnown RBP13.11□□□□□ -0.31
CACNB3-224ENST00000552812 MCTP1Q6DN14 999 aa13.11□□□□□ -0.31
CACNB3-224ENST00000552812 ZFPM1Q8IX07 1006 aa13.11□□□□□ -0.31
CACNB3-224ENST00000552812 ZNF710Q8N1W2 664 aa13.11□□□□□ -0.31
CACNB3-224ENST00000552812 CTCFLQ8NI51 663 aaPredicted RBP13.11□□□□□ -0.31
CACNB3-224ENST00000552812 WASF1Q92558 559 aa13.11□□□□□ -0.31
CACNB3-224ENST00000552812 SYT17Q9BSW7 474 aa13.11□□□□□ -0.31
CACNB3-224ENST00000552812 ZNF70Q9UC06 446 aaPredicted RBP13.11□□□□□ -0.31
CACNB3-224ENST00000552812 DDTLA6NHG4 134 aaPredicted RBP13.1□□□□□ -0.31
CACNB3-224ENST00000552812 LMNB1P20700 586 aa13.1□□□□□ -0.31
CACNB3-224ENST00000552812 KIF5BP33176 963 aa13.1□□□□□ -0.31
CACNB3-224ENST00000552812 PPP4R3BQ5MIZ7 849 aa13.1□□□□□ -0.31
CACNB3-224ENST00000552812 ZSCAN29Q8IWY8 852 aaPredicted RBP13.1□□□□□ -0.31
CACNB3-224ENST00000552812 CRACR2BQ8N4Y2 399 aaPredicted RBP13.1□□□□□ -0.31
CACNB3-224ENST00000552812 PNMA1Q8ND90 353 aa13.1□□□□□ -0.31
CACNB3-224ENST00000552812 FBXO18Q8NFZ0 1043 aa13.1□□□□□ -0.31
CACNB3-224ENST00000552812 C8orf76Q96K31 380 aa13.1□□□□□ -0.31
CACNB3-224ENST00000552812 RNF26Q9BY78 433 aaPredicted RBP13.1□□□□□ -0.31
CACNB3-224ENST00000552812 MYOZ2Q9NPC6 264 aa13.1□□□□□ -0.31
CACNB3-224ENST00000552812 STX8Q9UNK0 236 aa13.1□□□□□ -0.31
CACNB3-224ENST00000552812 GREB1LQ9C091 1923 aaPredicted RBP13.1□□□□□ -0.31
CACNB3-224ENST00000552812 SKOR2Q2VWA4 1001 aaPredicted RBP13.1□□□□□ -0.31
CACNB3-224ENST00000552812 ARHGAP27Q6ZUM4 889 aa13.1□□□□□ -0.31
CACNB3-224ENST00000552812 SH3BP5LQ7L8J4 393 aa13.1□□□□□ -0.31
CACNB3-224ENST00000552812 NBPF11Q86T75 865 aa13.1□□□□□ -0.31
CACNB3-224ENST00000552812 FAM83AQ86UY5 434 aa13.1□□□□□ -0.31
CACNB3-224ENST00000552812 FAM151AQ8WW52 585 aa13.1□□□□□ -0.31
CACNB3-224ENST00000552812 PHKBQ93100 1093 aa13.1□□□□□ -0.31
CACNB3-224ENST00000552812 IGKV6D-41A0A0C4DH26 115 aa13.09□□□□□ -0.31
CACNB3-224ENST00000552812 WNT10BO00744 389 aa13.09□□□□□ -0.31
CACNB3-224ENST00000552812 PPFIA3O75145 1194 aa13.09□□□□□ -0.31
CACNB3-224ENST00000552812 DEXIO95424 95 aa13.09□□□□□ -0.31
CACNB3-224ENST00000552812 TOP1P11387 765 aaKnown RBP13.09□□□□□ -0.31
CACNB3-224ENST00000552812 TATDN1Q6P1N9 297 aa13.09□□□□□ -0.31
CACNB3-224ENST00000552812 TMTC3Q6ZXV5 915 aa13.09□□□□□ -0.31
CACNB3-224ENST00000552812 TMEM87AQ8NBN3 555 aa13.09□□□□□ -0.31
CACNB3-224ENST00000552812 CEP95Q96GE4 821 aa13.09□□□□□ -0.31
CACNB3-224ENST00000552812 TMEM47Q9BQJ4 181 aa13.09□□□□□ -0.31
CACNB3-224ENST00000552812 ALG1Q9BT22 464 aa13.09□□□□□ -0.31
CACNB3-224ENST00000552812 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.09□□□□□ -0.31
CACNB3-224ENST00000552812 SLC26A6Q9BXS9 759 aa13.09□□□□□ -0.31
CACNB3-224ENST00000552812 TRIM34Q9BYJ4 488 aa13.09□□□□□ -0.31
CACNB3-224ENST00000552812 DNAJC18Q9H819 358 aa13.09□□□□□ -0.31
CACNB3-224ENST00000552812 MTMR4Q9NYA4 1195 aa13.09□□□□□ -0.31
CACNB3-224ENST00000552812 HERC5Q9UII4 1024 aaKnown RBP13.09□□□□□ -0.31
CACNB3-224ENST00000552812 CLRN2A0PK11 232 aa13.08□□□□□ -0.32
CACNB3-224ENST00000552812 AKR1B1P15121 316 aa13.08□□□□□ -0.32
CACNB3-224ENST00000552812 GMPSP49915 693 aaPredicted RBP13.08□□□□□ -0.32
CACNB3-224ENST00000552812 GNAQP50148 359 aa13.08□□□□□ -0.32
CACNB3-224ENST00000552812 FUT2Q10981 343 aa13.08□□□□□ -0.32
CACNB3-224ENST00000552812 RESTQ13127 1097 aa13.08□□□□□ -0.32
CACNB3-224ENST00000552812 GRM4Q14833 912 aa13.08□□□□□ -0.32
CACNB3-224ENST00000552812 CSPP1Q1MSJ5 1256 aa13.08□□□□□ -0.32
CACNB3-224ENST00000552812 FERMT3Q86UX7 667 aa13.08□□□□□ -0.32
CACNB3-224ENST00000552812 CSRNP1Q96S65 589 aa13.08□□□□□ -0.32
CACNB3-224ENST00000552812 LMBRD1Q9NUN5 540 aa13.08□□□□□ -0.32
CACNB3-224ENST00000552812 SBF1O95248 1867 aa13.08□□□□□ -0.32
CACNB3-224ENST00000552812 CNTNAP1P78357 1384 aa13.08□□□□□ -0.32
CACNB3-224ENST00000552812 TCP10L2B9ZVM9 353 aa13.08□□□□□ -0.32
CACNB3-224ENST00000552812 PRPF3O43395 683 aaKnown RBP13.08□□□□□ -0.32
CACNB3-224ENST00000552812 TRAK2O60296 914 aa13.08□□□□□ -0.32
CACNB3-224ENST00000552812 AKAP17AQ02040 695 aaKnown RBP13.08□□□□□ -0.32
CACNB3-224ENST00000552812 RBM27Q9P2N5 1060 aaKnown RBP13.08□□□□□ -0.32
CACNB3-224ENST00000552812 ZNF541Q9H0D2 1346 aa13.07□□□□□ -0.32
CACNB3-224ENST00000552812 TTLL1O95922 423 aa13.07□□□□□ -0.32
CACNB3-224ENST00000552812 TNNI2P48788 182 aa13.07□□□□□ -0.32
CACNB3-224ENST00000552812 KRT85P78386 507 aa13.07□□□□□ -0.32
CACNB3-224ENST00000552812 DNM1Q05193 864 aaKnown RBP13.07□□□□□ -0.32
CACNB3-224ENST00000552812 TNFAIP1Q13829 316 aa13.07□□□□□ -0.32
CACNB3-224ENST00000552812 TRIM29Q14134 588 aa13.07□□□□□ -0.32
CACNB3-224ENST00000552812 CERKLQ49MI3 558 aaPredicted RBP13.07□□□□□ -0.32
CACNB3-224ENST00000552812 ATL3Q6DD88 541 aa13.07□□□□□ -0.32
CACNB3-224ENST00000552812 MICALL2Q8IY33 904 aa13.07□□□□□ -0.32
CACNB3-224ENST00000552812 GPC2Q8N158 579 aa13.07□□□□□ -0.32
CACNB3-224ENST00000552812 VEZTQ9HBM0 779 aa13.07□□□□□ -0.32
CACNB3-224ENST00000552812 GJA3Q9Y6H8 435 aa13.07□□□□□ -0.32
CACNB3-224ENST00000552812 TCHHQ07283 1943 aa13.07□□□□□ -0.32
CACNB3-224ENST00000552812 PRPF40AO75400 957 aaKnown RBP13.06□□□□□ -0.32
CACNB3-224ENST00000552812 PLEKHA8P1O95397 391 aa13.06□□□□□ -0.32
CACNB3-224ENST00000552812 NBPF9Q3BBW0 867 aa13.06□□□□□ -0.32
CACNB3-224ENST00000552812 FOXD4L6Q3SYB3 417 aaPredicted RBP13.06□□□□□ -0.32
CACNB3-224ENST00000552812 FOXD4L3Q6VB84 417 aaPredicted RBP13.06□□□□□ -0.32
CACNB3-224ENST00000552812 IFNLR1Q8IU57 520 aaPredicted RBP13.06□□□□□ -0.32
CACNB3-224ENST00000552812 CHAMP1Q96JM3 812 aa13.06□□□□□ -0.32
CACNB3-224ENST00000552812 LZTS2Q9BRK4 669 aa13.06□□□□□ -0.32
CACNB3-224ENST00000552812 CNOT7Q9UIV1 285 aaKnown RBP13.06□□□□□ -0.32
CACNB3-224ENST00000552812 CNTNAP5Q8WYK1 1306 aa13.06□□□□□ -0.32
CACNB3-224ENST00000552812 MYH6P13533 1939 aa13.06□□□□□ -0.32
CACNB3-224ENST00000552812 MYH15Q9Y2K3 1946 aa13.06□□□□□ -0.32
CACNB3-224ENST00000552812 TBC1D12O60347 775 aa13.05□□□□□ -0.32
CACNB3-224ENST00000552812 XBP1P17861 261 aa13.05□□□□□ -0.32
CACNB3-224ENST00000552812 FOSBP53539 338 aa13.05□□□□□ -0.32
CACNB3-224ENST00000552812 GUCY1B3Q02153 619 aa13.05□□□□□ -0.32
CACNB3-224ENST00000552812 KRT40Q6A162 431 aa13.05□□□□□ -0.32
CACNB3-224ENST00000552812 TMEM179Q6ZVK1 233 aa13.05□□□□□ -0.32
CACNB3-224ENST00000552812 BRAPQ7Z569 592 aa13.05□□□□□ -0.32
CACNB3-224ENST00000552812 CMTR1Q8N1G2 835 aaKnown RBP13.05□□□□□ -0.32
CACNB3-224ENST00000552812 CCDC82Q8N4S0 544 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms