RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 C7orf43Q8WVR3 580 aa9.4□□□□□ -0.9
CHPT1-208ENST00000552215 WASF1Q92558 559 aa9.4□□□□□ -0.9
CHPT1-208ENST00000552215 DHX36Q9H2U1 1008 aaKnown RBP9.4□□□□□ -0.9
CHPT1-208ENST00000552215 RTEL1Q9NZ71 1219 aa9.4□□□□□ -0.9
CHPT1-208ENST00000552215 LIG1P18858 919 aa9.4□□□□□ -0.91
CHPT1-208ENST00000552215 KANSL2Q9H9L4 492 aa9.4□□□□□ -0.91
CHPT1-208ENST00000552215 MYO3BQ8WXR4 1341 aa9.39□□□□□ -0.91
CHPT1-208ENST00000552215 DDX11L8A8MPP1 907 aa9.39□□□□□ -0.91
CHPT1-208ENST00000552215 F13A1P00488 732 aa9.39□□□□□ -0.91
CHPT1-208ENST00000552215 VIL1P09327 827 aaKnown RBP9.39□□□□□ -0.91
CHPT1-208ENST00000552215 FOXP4Q8IVH2 680 aaPredicted RBP9.39□□□□□ -0.91
CHPT1-208ENST00000552215 DRC7Q8IY82 874 aa9.39□□□□□ -0.91
CHPT1-208ENST00000552215 NSUN7Q8NE18 718 aaKnown RBP9.39□□□□□ -0.91
CHPT1-208ENST00000552215 ZNF396Q96N95 335 aaPredicted RBP9.39□□□□□ -0.91
CHPT1-208ENST00000552215 NBPF3Q9H094 633 aa9.39□□□□□ -0.91
CHPT1-208ENST00000552215 PCDHA1Q9Y5I3 950 aa9.39□□□□□ -0.91
CHPT1-208ENST00000552215 SMCO2A6NFE2 343 aa9.39□□□□□ -0.91
CHPT1-208ENST00000552215 NCAPG2Q86XI2 1143 aa9.39□□□□□ -0.91
CHPT1-208ENST00000552215 AGBL3Q8NEM8 1001 aa9.39□□□□□ -0.91
CHPT1-208ENST00000552215 CUL5Q93034 780 aa9.39□□□□□ -0.91
CHPT1-208ENST00000552215 GPRC5DQ9NZD1 345 aa9.39□□□□□ -0.91
CHPT1-208ENST00000552215 ARFGEF2Q9Y6D5 1785 aa9.39□□□□□ -0.91
CHPT1-208ENST00000552215 FAM205AQ6ZU69 1335 aa9.39□□□□□ -0.91
CHPT1-208ENST00000552215 GADD45BO75293 160 aaPredicted RBP9.39□□□□□ -0.91
CHPT1-208ENST00000552215 INF2Q27J81 1249 aa9.39□□□□□ -0.91
CHPT1-208ENST00000552215 NBPF11Q86T75 865 aa9.39□□□□□ -0.91
CHPT1-208ENST00000552215 CDK5RAP3Q96JB5 506 aa9.39□□□□□ -0.91
CHPT1-208ENST00000552215 KLRG2A4D1S0 409 aaPredicted RBP9.38□□□□□ -0.91
CHPT1-208ENST00000552215 USP17L15C9J2P7 530 aa9.38□□□□□ -0.91
CHPT1-208ENST00000552215 USP17L13C9JLJ4 530 aa9.38□□□□□ -0.91
CHPT1-208ENST00000552215 USP17L11C9JVI0 530 aa9.38□□□□□ -0.91
CHPT1-208ENST00000552215 USP17L18D6R9N7 530 aa9.38□□□□□ -0.91
CHPT1-208ENST00000552215 USP17L22D6RA61 530 aa9.38□□□□□ -0.91
CHPT1-208ENST00000552215 USP17L17D6RBQ6 530 aa9.38□□□□□ -0.91
CHPT1-208ENST00000552215 USP17L19D6RCP7 530 aa9.38□□□□□ -0.91
CHPT1-208ENST00000552215 USP17L20D6RJB6 530 aa9.38□□□□□ -0.91
CHPT1-208ENST00000552215 FOXP2O15409 715 aa9.38□□□□□ -0.91
CHPT1-208ENST00000552215 VEGFAP15692 232 aaPredicted RBP9.38□□□□□ -0.91
CHPT1-208ENST00000552215 RAD51AP2Q09MP3 1159 aa9.38□□□□□ -0.91
CHPT1-208ENST00000552215 USP17L24Q0WX57 530 aa9.38□□□□□ -0.91
CHPT1-208ENST00000552215 USP17L6PQ6QN14 398 aa9.38□□□□□ -0.91
CHPT1-208ENST00000552215 RAVER2Q9HCJ3 691 aaKnown RBP9.38□□□□□ -0.91
CHPT1-208ENST00000552215 NOL7Q9UMY1 257 aaKnown RBP9.38□□□□□ -0.91
CHPT1-208ENST00000552215 TACC3Q9Y6A5 838 aa9.38□□□□□ -0.91
CHPT1-208ENST00000552215 SYCE3A1L190 88 aa9.38□□□□□ -0.91
CHPT1-208ENST00000552215 PFKFB2O60825 505 aa9.38□□□□□ -0.91
CHPT1-208ENST00000552215 AFMP43652 599 aa9.38□□□□□ -0.91
CHPT1-208ENST00000552215 OXER1Q8TDS5 423 aa9.38□□□□□ -0.91
CHPT1-208ENST00000552215 IGDCC4Q8TDY8 1250 aa9.38□□□□□ -0.91
CHPT1-208ENST00000552215 CLMNQ96JQ2 1002 aa9.38□□□□□ -0.91
CHPT1-208ENST00000552215 COL1A1P02452 1464 aaPredicted RBP9.38□□□□□ -0.91
CHPT1-208ENST00000552215 A0A1B0GVL5 298 aa9.38□□□□□ -0.91
CHPT1-208ENST00000552215 FAM205CA6NFA0 338 aa9.38□□□□□ -0.91
CHPT1-208ENST00000552215 BMP3P12645 472 aa9.38□□□□□ -0.91
CHPT1-208ENST00000552215 HUNKP57058 714 aa9.38□□□□□ -0.91
CHPT1-208ENST00000552215 FSIP1Q8NA03 581 aa9.38□□□□□ -0.91
CHPT1-208ENST00000552215 FAM151AQ8WW52 585 aa9.38□□□□□ -0.91
CHPT1-208ENST00000552215 TTC14Q96N46 770 aa9.38□□□□□ -0.91
CHPT1-208ENST00000552215 MRVI1Q9Y6F6 885 aa9.38□□□□□ -0.91
CHPT1-208ENST00000552215 VWA3AA6NCI4 1184 aa9.37□□□□□ -0.91
CHPT1-208ENST00000552215 SPDYE3A6NKU9 549 aa9.37□□□□□ -0.91
CHPT1-208ENST00000552215 KINO60870 393 aaKnown RBP9.37□□□□□ -0.91
CHPT1-208ENST00000552215 KRT18P05783 430 aaKnown RBP9.37□□□□□ -0.91
CHPT1-208ENST00000552215 POLD4Q9HCU8 107 aa9.37□□□□□ -0.91
CHPT1-208ENST00000552215 GNAQP50148 359 aa9.37□□□□□ -0.91
CHPT1-208ENST00000552215 KLHL10Q6JEL2 608 aa9.37□□□□□ -0.91
CHPT1-208ENST00000552215 SRBD1Q8N5C6 995 aaKnown RBP9.37□□□□□ -0.91
CHPT1-208ENST00000552215 GJA10Q969M2 543 aa9.37□□□□□ -0.91
CHPT1-208ENST00000552215 RTN4Q9NQC3 1192 aaKnown RBP9.37□□□□□ -0.91
CHPT1-208ENST00000552215 USP54Q70EL1 1684 aa9.37□□□□□ -0.91
CHPT1-208ENST00000552215 ASNSP08243 561 aa9.37□□□□□ -0.91
CHPT1-208ENST00000552215 TXKP42681 527 aa9.37□□□□□ -0.91
CHPT1-208ENST00000552215 CSPP1Q1MSJ5 1256 aa9.37□□□□□ -0.91
CHPT1-208ENST00000552215 MAEAQ7L5Y9 396 aa9.37□□□□□ -0.91
CHPT1-208ENST00000552215 GPC2Q8N158 579 aa9.37□□□□□ -0.91
CHPT1-208ENST00000552215 GOPCQ9HD26 462 aa9.37□□□□□ -0.91
CHPT1-208ENST00000552215 IL17RBQ9NRM6 502 aa9.37□□□□□ -0.91
CHPT1-208ENST00000552215 MTMR4Q9NYA4 1195 aa9.37□□□□□ -0.91
CHPT1-208ENST00000552215 CCPG1Q9ULG6 757 aa9.37□□□□□ -0.91
CHPT1-208ENST00000552215 IQCA1LA6NCM1 817 aa9.37□□□□□ -0.91
CHPT1-208ENST00000552215 CCNT1O60563 726 aaKnown RBP9.37□□□□□ -0.91
CHPT1-208ENST00000552215 NDUFB10O96000 172 aa9.37□□□□□ -0.91
CHPT1-208ENST00000552215 PPP4CP60510 307 aa9.37□□□□□ -0.91
CHPT1-208ENST00000552215 HTRA3P83110 453 aa9.37□□□□□ -0.91
CHPT1-208ENST00000552215 CLIC6Q96NY7 704 aa9.37□□□□□ -0.91
CHPT1-208ENST00000552215 TMEM260Q9NX78 707 aa9.37□□□□□ -0.91
CHPT1-208ENST00000552215 CACNA1FO60840 1977 aa9.37□□□□□ -0.91
CHPT1-208ENST00000552215 DEXIO95424 95 aa9.36□□□□□ -0.91
CHPT1-208ENST00000552215 PRELPP51888 382 aa9.36□□□□□ -0.91
CHPT1-208ENST00000552215 EXOSC10Q01780 885 aaKnown RBP9.36□□□□□ -0.91
CHPT1-208ENST00000552215 GIMAP6Q6P9H5 292 aa9.36□□□□□ -0.91
CHPT1-208ENST00000552215 TMEM179Q6ZVK1 233 aa9.36□□□□□ -0.91
CHPT1-208ENST00000552215 ZNF274Q96GC6 653 aaPredicted RBP9.36□□□□□ -0.91
CHPT1-208ENST00000552215 CCDC17Q96LX7 622 aa9.36□□□□□ -0.91
CHPT1-208ENST00000552215 ADARB2Q9NS39 739 aaKnown RBP9.36□□□□□ -0.91
CHPT1-208ENST00000552215 KRT2P35908 639 aa9.36□□□□□ -0.91
CHPT1-208ENST00000552215 IREB2P48200 963 aaKnown RBP9.36□□□□□ -0.91
CHPT1-208ENST00000552215 SLC30A10Q6XR72 485 aa9.36□□□□□ -0.91
CHPT1-208ENST00000552215 C6orf50Q9HD87 102 aa9.36□□□□□ -0.91
CHPT1-208ENST00000552215 CFAP45Q9UL16 551 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms