RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 TTF1Q15361 905 aaPredicted RBP17.21■□□□□ 0.35
CHMP1A-210ENST00000551981 GJC2Q5T442 439 aaPredicted RBP17.21■□□□□ 0.35
CHMP1A-210ENST00000551981 ZNF697Q5TEC3 545 aa17.21■□□□□ 0.35
CHMP1A-210ENST00000551981 AACSQ86V21 672 aa17.21■□□□□ 0.35
CHMP1A-210ENST00000551981 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.21■□□□□ 0.35
CHMP1A-210ENST00000551981 MB21D1Q8N884 522 aa17.21■□□□□ 0.35
CHMP1A-210ENST00000551981 SHCBP1Q8NEM2 672 aa17.21■□□□□ 0.35
CHMP1A-210ENST00000551981 TRPV1Q8NER1 839 aa17.21■□□□□ 0.35
CHMP1A-210ENST00000551981 GUCD1Q96NT3 240 aa17.21■□□□□ 0.35
CHMP1A-210ENST00000551981 RIOK1Q9BRS2 568 aaKnown RBP17.21■□□□□ 0.35
CHMP1A-210ENST00000551981 MOV10L1Q9BXT6 1211 aaKnown RBP17.21■□□□□ 0.35
CHMP1A-210ENST00000551981 SPATC1LQ9H0A9 340 aa17.21■□□□□ 0.35
CHMP1A-210ENST00000551981 MCM9Q9NXL9 1143 aa17.21■□□□□ 0.35
CHMP1A-210ENST00000551981 MYH8P13535 1937 aa17.21■□□□□ 0.35
CHMP1A-210ENST00000551981 A0A0G2JMZ2 1700 aa17.21■□□□□ 0.35
CHMP1A-210ENST00000551981 IGHA2P01877 340 aa17.2■□□□□ 0.34
CHMP1A-210ENST00000551981 GUCY1A2P33402 732 aa17.2■□□□□ 0.34
CHMP1A-210ENST00000551981 SEPT4O43236 478 aa17.19■□□□□ 0.34
CHMP1A-210ENST00000551981 MYCNP04198 464 aaPredicted RBP17.19■□□□□ 0.34
CHMP1A-210ENST00000551981 ERCC3P19447 782 aa17.19■□□□□ 0.34
CHMP1A-210ENST00000551981 GABPAQ06546 454 aa17.19■□□□□ 0.34
CHMP1A-210ENST00000551981 SLC39A5Q6ZMH5 540 aa17.19■□□□□ 0.34
CHMP1A-210ENST00000551981 FAM161BQ96MY7 647 aa17.19■□□□□ 0.34
CHMP1A-210ENST00000551981 MROH8Q9H579 483 aa17.19■□□□□ 0.34
CHMP1A-210ENST00000551981 SH2D4AQ9H788 454 aa17.19■□□□□ 0.34
CHMP1A-210ENST00000551981 PRDM5Q9NQX1 630 aaPredicted RBP17.19■□□□□ 0.34
CHMP1A-210ENST00000551981 PLS1Q14651 629 aa17.18■□□□□ 0.34
CHMP1A-210ENST00000551981 SLC9C2Q5TAH2 1124 aa17.18■□□□□ 0.34
CHMP1A-210ENST00000551981 TMEM179Q6ZVK1 233 aa17.18■□□□□ 0.34
CHMP1A-210ENST00000551981 ABRAQ8N0Z2 381 aa17.18■□□□□ 0.34
CHMP1A-210ENST00000551981 COL25A1Q9BXS0 654 aaPredicted RBP17.18■□□□□ 0.34
CHMP1A-210ENST00000551981 ARHGEF10LQ9HCE6 1279 aa17.18■□□□□ 0.34
CHMP1A-210ENST00000551981 SWAP70Q9UH65 585 aa17.18■□□□□ 0.34
CHMP1A-210ENST00000551981 A0A1W2PRG0 241 aa17.17■□□□□ 0.34
CHMP1A-210ENST00000551981 FLOT1O75955 427 aa17.17■□□□□ 0.34
CHMP1A-210ENST00000551981 PDE6AP16499 860 aa17.17■□□□□ 0.34
CHMP1A-210ENST00000551981 HSP90AB4PQ58FF6 505 aa17.17■□□□□ 0.34
CHMP1A-210ENST00000551981 ANO1Q5XXA6 986 aa17.17■□□□□ 0.34
CHMP1A-210ENST00000551981 CEP85Q6P2H3 762 aa17.17■□□□□ 0.34
CHMP1A-210ENST00000551981 NCAPG2Q86XI2 1143 aa17.17■□□□□ 0.34
CHMP1A-210ENST00000551981 EXOC6BQ9Y2D4 811 aa17.17■□□□□ 0.34
CHMP1A-210ENST00000551981 DSG3P32926 999 aa17.16■□□□□ 0.34
CHMP1A-210ENST00000551981 SNX17Q15036 470 aa17.16■□□□□ 0.34
CHMP1A-210ENST00000551981 TRIM60Q495X7 471 aa17.16■□□□□ 0.34
CHMP1A-210ENST00000551981 VCANP13611 3396 aa17.16■□□□□ 0.34
CHMP1A-210ENST00000551981 ZNF532Q9HCE3 1301 aa17.16■□□□□ 0.34
CHMP1A-210ENST00000551981 EYSQ5T1H1 3165 aa17.15■□□□□ 0.34
CHMP1A-210ENST00000551981 COBLO75128 1261 aa17.15■□□□□ 0.34
CHMP1A-210ENST00000551981 FCER1AP12319 257 aa17.15■□□□□ 0.34
CHMP1A-210ENST00000551981 ADCYAP1R1P41586 468 aa17.15■□□□□ 0.34
CHMP1A-210ENST00000551981 SHHQ15465 462 aa17.15■□□□□ 0.34
CHMP1A-210ENST00000551981 C1orf53Q5VUE5 145 aa17.15■□□□□ 0.34
CHMP1A-210ENST00000551981 BADQ92934 168 aa17.15■□□□□ 0.34
CHMP1A-210ENST00000551981 DCP1AQ9NPI6 582 aaPredicted RBP17.15■□□□□ 0.34
CHMP1A-210ENST00000551981 ZNFX1Q9P2E3 1918 aaKnown RBP17.15■□□□□ 0.34
CHMP1A-210ENST00000551981 PARP14Q460N5 1801 aa17.14■□□□□ 0.34
CHMP1A-210ENST00000551981 GOLIM4O00461 696 aa17.14■□□□□ 0.33
CHMP1A-210ENST00000551981 SLC25A27O95847 323 aa17.14■□□□□ 0.33
CHMP1A-210ENST00000551981 RLBP1P12271 317 aa17.14■□□□□ 0.33
CHMP1A-210ENST00000551981 ICA1Q05084 483 aa17.14■□□□□ 0.33
CHMP1A-210ENST00000551981 LRRC41Q15345 812 aa17.14■□□□□ 0.33
CHMP1A-210ENST00000551981 AMOTL1Q8IY63 956 aa17.14■□□□□ 0.33
CHMP1A-210ENST00000551981 LCORLQ8N3X6 602 aa17.14■□□□□ 0.33
CHMP1A-210ENST00000551981 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.14■□□□□ 0.33
CHMP1A-210ENST00000551981 SDR42E1Q8WUS8 393 aa17.14■□□□□ 0.33
CHMP1A-210ENST00000551981 FERMT2Q96AC1 680 aa17.14■□□□□ 0.33
CHMP1A-210ENST00000551981 ATG4CQ96DT6 458 aa17.14■□□□□ 0.33
CHMP1A-210ENST00000551981 MAML3Q96JK9 1138 aa17.14■□□□□ 0.33
CHMP1A-210ENST00000551981 DNAJC2Q99543 621 aaKnown RBP17.14■□□□□ 0.33
CHMP1A-210ENST00000551981 CDX2Q99626 313 aaPredicted RBP17.14■□□□□ 0.33
CHMP1A-210ENST00000551981 IL1RAPL2Q9NP60 686 aa17.14■□□□□ 0.33
CHMP1A-210ENST00000551981 PDLIM7Q9NR12 457 aa17.14■□□□□ 0.33
CHMP1A-210ENST00000551981 NRBP1Q9UHY1 535 aa17.14■□□□□ 0.33
CHMP1A-210ENST00000551981 TMX2Q9Y320 296 aa17.14■□□□□ 0.33
CHMP1A-210ENST00000551981 CDH23Q9H251 3354 aa17.13■□□□□ 0.33
CHMP1A-210ENST00000551981 WDR46O15213 610 aaKnown RBP17.13■□□□□ 0.33
CHMP1A-210ENST00000551981 CYP2D6P10635 497 aa17.13■□□□□ 0.33
CHMP1A-210ENST00000551981 RARBP10826 455 aa17.13■□□□□ 0.33
CHMP1A-210ENST00000551981 SMAD3P84022 425 aaKnown RBP17.13■□□□□ 0.33
CHMP1A-210ENST00000551981 EVX2Q03828 476 aa17.13■□□□□ 0.33
CHMP1A-210ENST00000551981 PRAMEF19Q5SWL8 479 aa17.13■□□□□ 0.33
CHMP1A-210ENST00000551981 C9orf50Q5SZB4 431 aa17.13■□□□□ 0.33
CHMP1A-210ENST00000551981 SAMD1Q6SPF0 538 aaPredicted RBP17.13■□□□□ 0.33
CHMP1A-210ENST00000551981 SPICE1Q8N0Z3 855 aa17.13■□□□□ 0.33
CHMP1A-210ENST00000551981 CLASRPQ8N2M8 674 aaKnown RBP17.13■□□□□ 0.33
CHMP1A-210ENST00000551981 SLC44A5Q8NCS7 719 aa17.13■□□□□ 0.33
CHMP1A-210ENST00000551981 RHPN1Q8TCX5 695 aa17.13■□□□□ 0.33
CHMP1A-210ENST00000551981 SEMA6BQ9H3T3 888 aa17.13■□□□□ 0.33
CHMP1A-210ENST00000551981 VCPKMTQ9H867 229 aa17.13■□□□□ 0.33
CHMP1A-210ENST00000551981 XPNPEP3Q9NQH7 507 aa17.13■□□□□ 0.33
CHMP1A-210ENST00000551981 COL11A1P12107 1806 aaPredicted RBP17.12■□□□□ 0.33
CHMP1A-210ENST00000551981 PLXNA1Q9UIW2 1896 aa17.12■□□□□ 0.33
CHMP1A-210ENST00000551981 SPTBN5Q9NRC6 3674 aaKnown RBP17.12■□□□□ 0.33
CHMP1A-210ENST00000551981 TCRBV5S4A2TA0A5A2 114 aa17.12■□□□□ 0.33
CHMP1A-210ENST00000551981 IFIT2P09913 472 aaKnown RBP17.12■□□□□ 0.33
CHMP1A-210ENST00000551981 FAM47AQ5JRC9 791 aa17.12■□□□□ 0.33
CHMP1A-210ENST00000551981 KIAA1755Q5JYT7 1200 aa17.12■□□□□ 0.33
CHMP1A-210ENST00000551981 RNF180Q86T96 592 aa17.12■□□□□ 0.33
CHMP1A-210ENST00000551981 MAFAQ8NHW3 353 aaPredicted RBP17.12■□□□□ 0.33
CHMP1A-210ENST00000551981 CCDC17Q96LX7 622 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms