RNA–Protein interactions for RNA: ENST00000551352.1

SMARCD1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-210ENST00000551352 RAI14Q9P0K7 980 aa8.74□□□□□ -1.01
SMARCD1-210ENST00000551352 TAF6LQ9Y6J9 622 aa8.74□□□□□ -1.01
SMARCD1-210ENST00000551352 ZNF236Q9UL36 1845 aa8.74□□□□□ -1.01
SMARCD1-210ENST00000551352 FLT1P17948 1338 aa8.74□□□□□ -1.01
SMARCD1-210ENST00000551352 TCRBV5S4A2TA0A5A2 114 aa8.73□□□□□ -1.01
SMARCD1-210ENST00000551352 SOX1O00570 391 aaPredicted RBP8.73□□□□□ -1.01
SMARCD1-210ENST00000551352 TNPO2O14787 897 aaKnown RBP8.73□□□□□ -1.01
SMARCD1-210ENST00000551352 FOXP2O15409 715 aa8.73□□□□□ -1.01
SMARCD1-210ENST00000551352 GPAA1O43292 621 aa8.73□□□□□ -1.01
SMARCD1-210ENST00000551352 FARP2O94887 1054 aaPredicted RBP8.73□□□□□ -1.01
SMARCD1-210ENST00000551352 GDF11O95390 407 aa8.73□□□□□ -1.01
SMARCD1-210ENST00000551352 SGPL1O95470 568 aa8.73□□□□□ -1.01
SMARCD1-210ENST00000551352 CYP21A2P08686 494 aa8.73□□□□□ -1.01
SMARCD1-210ENST00000551352 RPS6KB1P23443 525 aa8.73□□□□□ -1.01
SMARCD1-210ENST00000551352 PPP4CP60510 307 aa8.73□□□□□ -1.01
SMARCD1-210ENST00000551352 MAP3K12Q12852 859 aa8.73□□□□□ -1.01
SMARCD1-210ENST00000551352 RAB3GAP1Q15042 981 aa8.73□□□□□ -1.01
SMARCD1-210ENST00000551352 FAM110CQ1W6H9 321 aa8.73□□□□□ -1.01
SMARCD1-210ENST00000551352 BLOC1S2Q6QNY1 142 aa8.73□□□□□ -1.01
SMARCD1-210ENST00000551352 MAPKAPK5Q8IW41 473 aa8.73□□□□□ -1.01
SMARCD1-210ENST00000551352 SLF2Q8IX21 1173 aa8.73□□□□□ -1.01
SMARCD1-210ENST00000551352 PROCA1Q8NCQ7 364 aaPredicted RBP8.73□□□□□ -1.01
SMARCD1-210ENST00000551352 ZNF280CQ8ND82 737 aa8.73□□□□□ -1.01
SMARCD1-210ENST00000551352 INTS4Q96HW7 963 aaKnown RBP8.73□□□□□ -1.01
SMARCD1-210ENST00000551352 CRISPLD2Q9H0B8 497 aa8.73□□□□□ -1.01
SMARCD1-210ENST00000551352 PUS7LQ9H0K6 701 aaKnown RBP8.73□□□□□ -1.01
SMARCD1-210ENST00000551352 CWC22Q9HCG8 908 aaKnown RBP8.73□□□□□ -1.01
SMARCD1-210ENST00000551352 LIMCH1Q9UPQ0 1083 aa8.73□□□□□ -1.01
SMARCD1-210ENST00000551352 ZNF532Q9HCE3 1301 aa8.73□□□□□ -1.01
SMARCD1-210ENST00000551352 SMCHD1A6NHR9 2005 aa8.72□□□□□ -1.01
SMARCD1-210ENST00000551352 HOXD10P28358 340 aa8.72□□□□□ -1.01
SMARCD1-210ENST00000551352 MTMR2Q13614 643 aa8.72□□□□□ -1.01
SMARCD1-210ENST00000551352 COL9A3Q14050 684 aaPredicted RBP8.72□□□□□ -1.01
SMARCD1-210ENST00000551352 NAA16Q6N069 864 aaPredicted RBP8.72□□□□□ -1.01
SMARCD1-210ENST00000551352 MAGEB6Q8N7X4 407 aa8.72□□□□□ -1.01
SMARCD1-210ENST00000551352 PXYLP1Q8TE99 480 aa8.72□□□□□ -1.01
SMARCD1-210ENST00000551352 TGFBRAP1Q8WUH2 860 aa8.72□□□□□ -1.01
SMARCD1-210ENST00000551352 TRIB2Q92519 343 aa8.72□□□□□ -1.01
SMARCD1-210ENST00000551352 DEFB118Q96PH6 123 aa8.72□□□□□ -1.01
SMARCD1-210ENST00000551352 NEK1Q96PY6 1258 aa8.72□□□□□ -1.01
SMARCD1-210ENST00000551352 P2RX7Q99572 595 aaKnown RBP8.72□□□□□ -1.01
SMARCD1-210ENST00000551352 WDR18Q9BV38 432 aa8.72□□□□□ -1.01
SMARCD1-210ENST00000551352 ALDH8A1Q9H2A2 487 aaPredicted RBP8.72□□□□□ -1.01
SMARCD1-210ENST00000551352 MORF4L1Q9UBU8 362 aa8.72□□□□□ -1.01
SMARCD1-210ENST00000551352 SAP30BPQ9UHR5 308 aaKnown RBP8.72□□□□□ -1.01
SMARCD1-210ENST00000551352 CTNNA3Q9UI47 895 aa8.72□□□□□ -1.01
SMARCD1-210ENST00000551352 USP17L5A8MUK1 530 aa8.71□□□□□ -1.02
SMARCD1-210ENST00000551352 CNMDO75829 334 aa8.71□□□□□ -1.02
SMARCD1-210ENST00000551352 LDHCP07864 332 aa8.71□□□□□ -1.02
SMARCD1-210ENST00000551352 UBXN2AP68543 259 aa8.71□□□□□ -1.02
SMARCD1-210ENST00000551352 GSTO1P78417 241 aa8.71□□□□□ -1.02
SMARCD1-210ENST00000551352 NUCB2P80303 420 aa8.71□□□□□ -1.02
SMARCD1-210ENST00000551352 ANKRD1Q15327 319 aa8.71□□□□□ -1.02
SMARCD1-210ENST00000551352 Q3C1V9 767 aa8.71□□□□□ -1.02
SMARCD1-210ENST00000551352 STOX1Q6ZVD7 989 aa8.71□□□□□ -1.02
SMARCD1-210ENST00000551352 SMCR8Q8TEV9 937 aaPredicted RBP8.71□□□□□ -1.02
SMARCD1-210ENST00000551352 USP6NLQ92738 828 aa8.71□□□□□ -1.02
SMARCD1-210ENST00000551352 DPF3Q92784 378 aa8.71□□□□□ -1.02
SMARCD1-210ENST00000551352 PAWRQ96IZ0 340 aaKnown RBP8.71□□□□□ -1.02
SMARCD1-210ENST00000551352 ZSCAN31Q96LW9 406 aaPredicted RBP8.71□□□□□ -1.02
SMARCD1-210ENST00000551352 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.71□□□□□ -1.02
SMARCD1-210ENST00000551352 PORCNQ9H237 461 aa8.71□□□□□ -1.02
SMARCD1-210ENST00000551352 SH2B1Q9NRF2 756 aaPredicted RBP8.71□□□□□ -1.02
SMARCD1-210ENST00000551352 EMILIN3Q9NT22 766 aa8.71□□□□□ -1.02
SMARCD1-210ENST00000551352 LRP2BPQ9P2M1 347 aa8.71□□□□□ -1.02
SMARCD1-210ENST00000551352 RBPJLQ9UBG7 517 aa8.71□□□□□ -1.02
SMARCD1-210ENST00000551352 BIN2Q9UBW5 565 aaPredicted RBP8.71□□□□□ -1.02
SMARCD1-210ENST00000551352 HERC5Q9UII4 1024 aaKnown RBP8.71□□□□□ -1.02
SMARCD1-210ENST00000551352 ZBTB21Q9ULJ3 1066 aa8.71□□□□□ -1.02
SMARCD1-210ENST00000551352 MYH4Q9Y623 1939 aa8.7□□□□□ -1.02
SMARCD1-210ENST00000551352 SMIM22K7EJ46 135 aa8.7□□□□□ -1.02
SMARCD1-210ENST00000551352 LARGE1O95461 756 aa8.7□□□□□ -1.02
SMARCD1-210ENST00000551352 FGAP02671 866 aa8.7□□□□□ -1.02
SMARCD1-210ENST00000551352 HMGB1P09429 215 aaKnown RBP8.7□□□□□ -1.02
SMARCD1-210ENST00000551352 HOXA7P31268 230 aaPredicted RBP8.7□□□□□ -1.02
SMARCD1-210ENST00000551352 GUCY1A2P33402 732 aa8.7□□□□□ -1.02
SMARCD1-210ENST00000551352 BACE1P56817 501 aa8.7□□□□□ -1.02
SMARCD1-210ENST00000551352 IMMTQ16891 758 aaKnown RBP8.7□□□□□ -1.02
SMARCD1-210ENST00000551352 MAP3K21Q5TCX8 1036 aa8.7□□□□□ -1.02
SMARCD1-210ENST00000551352 MIGA1Q8NAN2 632 aa8.7□□□□□ -1.02
SMARCD1-210ENST00000551352 NKX2-3Q8TAU0 364 aa8.7□□□□□ -1.02
SMARCD1-210ENST00000551352 TNPO1Q92973 898 aaKnown RBP8.7□□□□□ -1.02
SMARCD1-210ENST00000551352 STRBPQ96SI9 672 aaKnown RBP8.7□□□□□ -1.02
SMARCD1-210ENST00000551352 TAOK2Q9UL54 1235 aa8.7□□□□□ -1.02
SMARCD1-210ENST00000551352 PFASO15067 1338 aa8.7□□□□□ -1.02
SMARCD1-210ENST00000551352 ZMYM6O95789 1325 aa8.7□□□□□ -1.02
SMARCD1-210ENST00000551352 MCM3APO60318 1980 aa8.7□□□□□ -1.02
SMARCD1-210ENST00000551352 E7EWF7 191 aa8.69□□□□□ -1.02
SMARCD1-210ENST00000551352 MBD4O95243 580 aa8.69□□□□□ -1.02
SMARCD1-210ENST00000551352 HMGCRP04035 888 aa8.69□□□□□ -1.02
SMARCD1-210ENST00000551352 MCM4P33991 863 aa8.69□□□□□ -1.02
SMARCD1-210ENST00000551352 GCLCP48506 637 aaPredicted RBP8.69□□□□□ -1.02
SMARCD1-210ENST00000551352 HERVK_113P62684 666 aa8.69□□□□□ -1.02
SMARCD1-210ENST00000551352 TOB2Q14106 344 aaPredicted RBP8.69□□□□□ -1.02
SMARCD1-210ENST00000551352 ALX1Q15699 326 aa8.69□□□□□ -1.02
SMARCD1-210ENST00000551352 CCL14Q16627 93 aa8.69□□□□□ -1.02
SMARCD1-210ENST00000551352 TATDN1Q6P1N9 297 aa8.69□□□□□ -1.02
SMARCD1-210ENST00000551352 TCEANC2Q96MN5 208 aa8.69□□□□□ -1.02
SMARCD1-210ENST00000551352 RIOK1Q9BRS2 568 aaKnown RBP8.69□□□□□ -1.02
SMARCD1-210ENST00000551352 LARP6Q9BRS8 491 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms