RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 TMEM179Q6ZVK1 233 aa15.55■□□□□ 0.08
PTCH1-221ENST00000550914 LRCH3Q96II8 777 aa15.55■□□□□ 0.08
PTCH1-221ENST00000550914 FLRT1Q9NZU1 646 aa15.55■□□□□ 0.08
PTCH1-221ENST00000550914 DDX19BQ9UMR2 479 aa15.55■□□□□ 0.08
PTCH1-221ENST00000550914 SYN1P17600 705 aa15.54■□□□□ 0.08
PTCH1-221ENST00000550914 TDHQ8IZJ6 230 aa15.54■□□□□ 0.08
PTCH1-221ENST00000550914 MIER1Q8N108 512 aa15.54■□□□□ 0.08
PTCH1-221ENST00000550914 MB21D1Q8N884 522 aa15.54■□□□□ 0.08
PTCH1-221ENST00000550914 SHCBP1Q8NEM2 672 aa15.54■□□□□ 0.08
PTCH1-221ENST00000550914 LPAR1Q92633 364 aa15.54■□□□□ 0.08
PTCH1-221ENST00000550914 CHMP4BQ9H444 224 aaKnown RBP15.54■□□□□ 0.08
PTCH1-221ENST00000550914 ATP8A2Q9NTI2 1148 aa15.54■□□□□ 0.08
PTCH1-221ENST00000550914 ZBTB40Q9NUA8 1239 aa15.54■□□□□ 0.08
PTCH1-221ENST00000550914 DDX20Q9UHI6 824 aaKnown RBP15.54■□□□□ 0.08
PTCH1-221ENST00000550914 A0A1W2PRG0 241 aa15.53■□□□□ 0.08
PTCH1-221ENST00000550914 MPHOSPH10O00566 681 aaKnown RBP15.53■□□□□ 0.08
PTCH1-221ENST00000550914 LRRC26Q2I0M4 334 aa15.53■□□□□ 0.08
PTCH1-221ENST00000550914 OLFML2BQ68BL8 750 aa15.53■□□□□ 0.08
PTCH1-221ENST00000550914 LCORLQ8N3X6 602 aa15.53■□□□□ 0.08
PTCH1-221ENST00000550914 SDR42E1Q8WUS8 393 aa15.53■□□□□ 0.08
PTCH1-221ENST00000550914 DNAJC2Q99543 621 aaKnown RBP15.53■□□□□ 0.08
PTCH1-221ENST00000550914 SH2D4AQ9H788 454 aa15.53■□□□□ 0.08
PTCH1-221ENST00000550914 ATP5JP18859 108 aa15.52■□□□□ 0.08
PTCH1-221ENST00000550914 PPP4R3CPQ6ZMV5 832 aa15.52■□□□□ 0.08
PTCH1-221ENST00000550914 SIRT2Q8IXJ6 389 aa15.52■□□□□ 0.08
PTCH1-221ENST00000550914 NPLOC4Q8TAT6 608 aa15.52■□□□□ 0.08
PTCH1-221ENST00000550914 CCDC17Q96LX7 622 aa15.52■□□□□ 0.08
PTCH1-221ENST00000550914 MOV10L1Q9BXT6 1211 aaKnown RBP15.52■□□□□ 0.08
PTCH1-221ENST00000550914 TANGO6Q9C0B7 1094 aa15.52■□□□□ 0.08
PTCH1-221ENST00000550914 UBE2OQ9C0C9 1292 aaKnown RBP15.52■□□□□ 0.08
PTCH1-221ENST00000550914 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.52■□□□□ 0.08
PTCH1-221ENST00000550914 SPATC1LQ9H0A9 340 aa15.52■□□□□ 0.08
PTCH1-221ENST00000550914 ARHGEF10LQ9HCE6 1279 aa15.52■□□□□ 0.08
PTCH1-221ENST00000550914 PAG1Q9NWQ8 432 aa15.52■□□□□ 0.08
PTCH1-221ENST00000550914 APBB1O00213 710 aa15.51■□□□□ 0.07
PTCH1-221ENST00000550914 DNM1LO00429 736 aa15.51■□□□□ 0.07
PTCH1-221ENST00000550914 CYBAP13498 195 aa15.51■□□□□ 0.07
PTCH1-221ENST00000550914 ADORA2AP29274 412 aa15.51■□□□□ 0.07
PTCH1-221ENST00000550914 DSG3P32926 999 aa15.51■□□□□ 0.07
PTCH1-221ENST00000550914 ADD2P35612 726 aa15.51■□□□□ 0.07
PTCH1-221ENST00000550914 EVX2Q03828 476 aa15.51■□□□□ 0.07
PTCH1-221ENST00000550914 DPP9Q86TI2 863 aa15.51■□□□□ 0.07
PTCH1-221ENST00000550914 ABRAQ8N0Z2 381 aa15.51■□□□□ 0.07
PTCH1-221ENST00000550914 MROH8Q9H579 483 aa15.51■□□□□ 0.07
PTCH1-221ENST00000550914 SLC5A4Q9NY91 659 aa15.51■□□□□ 0.07
PTCH1-221ENST00000550914 TMX2Q9Y320 296 aa15.51■□□□□ 0.07
PTCH1-221ENST00000550914 COL11A1P12107 1806 aaPredicted RBP15.51■□□□□ 0.07
PTCH1-221ENST00000550914 SMCHD1A6NHR9 2005 aa15.5■□□□□ 0.07
PTCH1-221ENST00000550914 CYP2D6P10635 497 aa15.5■□□□□ 0.07
PTCH1-221ENST00000550914 CNGA1P29973 690 aa15.5■□□□□ 0.07
PTCH1-221ENST00000550914 CYP2C19P33261 490 aa15.5■□□□□ 0.07
PTCH1-221ENST00000550914 AMOTL1Q8IY63 956 aa15.5■□□□□ 0.07
PTCH1-221ENST00000550914 SLC44A5Q8NCS7 719 aa15.5■□□□□ 0.07
PTCH1-221ENST00000550914 HAUS7Q99871 368 aa15.5■□□□□ 0.07
PTCH1-221ENST00000550914 SENP6Q9GZR1 1112 aaPredicted RBP15.5■□□□□ 0.07
PTCH1-221ENST00000550914 ARMT1Q9H993 441 aa15.5■□□□□ 0.07
PTCH1-221ENST00000550914 PLXNA1Q9UIW2 1896 aa15.49■□□□□ 0.07
PTCH1-221ENST00000550914 WDR46O15213 610 aaKnown RBP15.49■□□□□ 0.07
PTCH1-221ENST00000550914 MBD4O95243 580 aa15.49■□□□□ 0.07
PTCH1-221ENST00000550914 ERCC3P19447 782 aa15.49■□□□□ 0.07
PTCH1-221ENST00000550914 ICA1Q05084 483 aa15.49■□□□□ 0.07
PTCH1-221ENST00000550914 UBE3CQ15386 1083 aa15.49■□□□□ 0.07
PTCH1-221ENST00000550914 KIAA1755Q5JYT7 1200 aa15.49■□□□□ 0.07
PTCH1-221ENST00000550914 C12orf60Q5U649 245 aa15.49■□□□□ 0.07
PTCH1-221ENST00000550914 DIEXFQ68CQ4 756 aaKnown RBP15.49■□□□□ 0.07
PTCH1-221ENST00000550914 SIAH1Q8IUQ4 282 aa15.49■□□□□ 0.07
PTCH1-221ENST00000550914 DEFB123Q8N688 67 aa15.49■□□□□ 0.07
PTCH1-221ENST00000550914 ARRDC4Q8NCT1 418 aa15.49■□□□□ 0.07
PTCH1-221ENST00000550914 SLC17A8Q8NDX2 589 aa15.49■□□□□ 0.07
PTCH1-221ENST00000550914 TRPV1Q8NER1 839 aa15.49■□□□□ 0.07
PTCH1-221ENST00000550914 DYNLL2Q96FJ2 89 aa15.49■□□□□ 0.07
PTCH1-221ENST00000550914 DDRGK1Q96HY6 314 aa15.49■□□□□ 0.07
PTCH1-221ENST00000550914 BOLA2Q9H3K6 86 aa15.49■□□□□ 0.07
PTCH1-221ENST00000550914 VCPKMTQ9H867 229 aa15.49■□□□□ 0.07
PTCH1-221ENST00000550914 COG6Q9Y2V7 657 aa15.49■□□□□ 0.07
PTCH1-221ENST00000550914 SEPT4O43236 478 aa15.48■□□□□ 0.07
PTCH1-221ENST00000550914 PRKAB2O43741 272 aa15.48■□□□□ 0.07
PTCH1-221ENST00000550914 FLOT1O75955 427 aa15.48■□□□□ 0.07
PTCH1-221ENST00000550914 AKR1B1P15121 316 aa15.48■□□□□ 0.07
PTCH1-221ENST00000550914 ZSCAN25Q6NSZ9 544 aa15.48■□□□□ 0.07
PTCH1-221ENST00000550914 C16orf86Q6ZW13 317 aa15.48■□□□□ 0.07
PTCH1-221ENST00000550914 UNC80Q8N2C7 3258 aa15.48■□□□□ 0.07
PTCH1-221ENST00000550914 LTBP2Q14767 1821 aa15.47■□□□□ 0.07
PTCH1-221ENST00000550914 GREB1LQ9C091 1923 aaPredicted RBP15.47■□□□□ 0.07
PTCH1-221ENST00000550914 COBLO75128 1261 aa15.47■□□□□ 0.07
PTCH1-221ENST00000550914 SLC25A27O95847 323 aa15.47■□□□□ 0.07
PTCH1-221ENST00000550914 CDK8P49336 464 aa15.47■□□□□ 0.07
PTCH1-221ENST00000550914 KANSL2Q9H9L4 492 aa15.47■□□□□ 0.07
PTCH1-221ENST00000550914 ADAMTS5Q9UNA0 930 aa15.47■□□□□ 0.07
PTCH1-221ENST00000550914 USP17L12C9JPN9 530 aa15.46■□□□□ 0.07
PTCH1-221ENST00000550914 USP17L21D6R901 530 aa15.46■□□□□ 0.07
PTCH1-221ENST00000550914 FCER1AP12319 257 aa15.46■□□□□ 0.07
PTCH1-221ENST00000550914 MDM2Q00987 491 aaPredicted RBP15.46■□□□□ 0.07
PTCH1-221ENST00000550914 PLS1Q14651 629 aa15.46■□□□□ 0.07
PTCH1-221ENST00000550914 NCAPG2Q86XI2 1143 aa15.46■□□□□ 0.07
PTCH1-221ENST00000550914 SPICE1Q8N0Z3 855 aa15.46■□□□□ 0.07
PTCH1-221ENST00000550914 ATG4CQ96DT6 458 aa15.46■□□□□ 0.07
PTCH1-221ENST00000550914 LBHD1Q9BQE6 289 aaPredicted RBP15.46■□□□□ 0.07
PTCH1-221ENST00000550914 MTMR10Q9NXD2 777 aa15.46■□□□□ 0.07
PTCH1-221ENST00000550914 PRKAG2Q9UGJ0 569 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms