RNA–Protein interactions for RNA: ENST00000550863.1

CPNE8-207, Transcript of copine 8, humanhuman

TSL 4

Gene CPNE8, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-207ENST00000550863 SOCS4Q8WXH5 440 aa13.82□□□□□ -0.2
CPNE8-207ENST00000550863 OSBP2Q969R2 916 aa13.82□□□□□ -0.2
CPNE8-207ENST00000550863 GCC1Q96CN9 775 aa13.82□□□□□ -0.2
CPNE8-207ENST00000550863 APBA2Q99767 749 aa13.82□□□□□ -0.2
CPNE8-207ENST00000550863 NUDT12Q9BQG2 462 aa13.82□□□□□ -0.2
CPNE8-207ENST00000550863 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.82□□□□□ -0.2
CPNE8-207ENST00000550863 ECHDC1Q9NTX5 307 aa13.82□□□□□ -0.2
CPNE8-207ENST00000550863 RBM27Q9P2N5 1060 aaKnown RBP13.82□□□□□ -0.2
CPNE8-207ENST00000550863 LTBP2Q14767 1821 aa13.82□□□□□ -0.2
CPNE8-207ENST00000550863 MAPK4P31152 587 aa13.81□□□□□ -0.2
CPNE8-207ENST00000550863 USP14P54578 494 aa13.81□□□□□ -0.2
CPNE8-207ENST00000550863 UBE3CQ15386 1083 aa13.81□□□□□ -0.2
CPNE8-207ENST00000550863 TMED8Q6PL24 325 aaPredicted RBP13.81□□□□□ -0.2
CPNE8-207ENST00000550863 TMEM179Q6ZVK1 233 aa13.81□□□□□ -0.2
CPNE8-207ENST00000550863 C16orf86Q6ZW13 317 aa13.81□□□□□ -0.2
CPNE8-207ENST00000550863 NPLOC4Q8TAT6 608 aa13.81□□□□□ -0.2
CPNE8-207ENST00000550863 ATG4CQ96DT6 458 aa13.81□□□□□ -0.2
CPNE8-207ENST00000550863 SEC62Q99442 399 aaKnown RBP13.81□□□□□ -0.2
CPNE8-207ENST00000550863 DCTPP1Q9H773 170 aa13.81□□□□□ -0.2
CPNE8-207ENST00000550863 CWC22Q9HCG8 908 aaKnown RBP13.81□□□□□ -0.2
CPNE8-207ENST00000550863 HMX1Q9NP08 348 aaPredicted RBP13.81□□□□□ -0.2
CPNE8-207ENST00000550863 RABGAP1Q9Y3P9 1069 aa13.81□□□□□ -0.2
CPNE8-207ENST00000550863 PFASO15067 1338 aa13.81□□□□□ -0.2
CPNE8-207ENST00000550863 RPTORQ8N122 1335 aa13.81□□□□□ -0.2
CPNE8-207ENST00000550863 SMCHD1A6NHR9 2005 aa13.81□□□□□ -0.2
CPNE8-207ENST00000550863 RGS2P41220 211 aa13.8□□□□□ -0.2
CPNE8-207ENST00000550863 RRP1P56182 461 aaKnown RBP13.8□□□□□ -0.2
CPNE8-207ENST00000550863 ATP2B2Q01814 1243 aa13.8□□□□□ -0.2
CPNE8-207ENST00000550863 MAP2K5Q13163 448 aa13.8□□□□□ -0.2
CPNE8-207ENST00000550863 CCAR1Q8IX12 1150 aaKnown RBP13.8□□□□□ -0.2
CPNE8-207ENST00000550863 C7orf61Q8IZ16 206 aa13.8□□□□□ -0.2
CPNE8-207ENST00000550863 YTHDC1Q96MU7 727 aaKnown RBP13.8□□□□□ -0.2
CPNE8-207ENST00000550863 CRBNQ96SW2 442 aa13.8□□□□□ -0.2
CPNE8-207ENST00000550863 HTATIP2Q9BUP3 242 aa13.8□□□□□ -0.2
CPNE8-207ENST00000550863 CHMP4BQ9H444 224 aaKnown RBP13.8□□□□□ -0.2
CPNE8-207ENST00000550863 ATP8A2Q9NTI2 1148 aa13.8□□□□□ -0.2
CPNE8-207ENST00000550863 FBXO28Q9NVF7 368 aa13.8□□□□□ -0.2
CPNE8-207ENST00000550863 SWAP70Q9UH65 585 aa13.8□□□□□ -0.2
CPNE8-207ENST00000550863 LCTP09848 1927 aa13.8□□□□□ -0.2
CPNE8-207ENST00000550863 GSG1L2A8MUP6 293 aa13.79□□□□□ -0.2
CPNE8-207ENST00000550863 CYP2C19P33261 490 aa13.79□□□□□ -0.2
CPNE8-207ENST00000550863 LBX2Q6XYB7 198 aa13.79□□□□□ -0.2
CPNE8-207ENST00000550863 KBTBD3Q8NAB2 608 aa13.79□□□□□ -0.2
CPNE8-207ENST00000550863 TRPV1Q8NER1 839 aa13.79□□□□□ -0.2
CPNE8-207ENST00000550863 PI4K2BQ8TCG2 481 aa13.79□□□□□ -0.2
CPNE8-207ENST00000550863 STRBPQ96SI9 672 aaKnown RBP13.79□□□□□ -0.2
CPNE8-207ENST00000550863 NUP88Q99567 741 aaPredicted RBP13.79□□□□□ -0.2
CPNE8-207ENST00000550863 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.79□□□□□ -0.2
CPNE8-207ENST00000550863 MOV10L1Q9BXT6 1211 aaKnown RBP13.79□□□□□ -0.2
CPNE8-207ENST00000550863 ZMYND8Q9ULU4 1186 aaPredicted RBP13.79□□□□□ -0.2
CPNE8-207ENST00000550863 ROBO3Q96MS0 1386 aa13.79□□□□□ -0.2
CPNE8-207ENST00000550863 LRRC37A2A6NM11 1700 aa13.78□□□□□ -0.2
CPNE8-207ENST00000550863 GPAA1O43292 621 aa13.78□□□□□ -0.2
CPNE8-207ENST00000550863 EVI5O60447 810 aa13.78□□□□□ -0.2
CPNE8-207ENST00000550863 FLOT1O75955 427 aa13.78□□□□□ -0.2
CPNE8-207ENST00000550863 EEF2P13639 858 aaKnown RBP13.78□□□□□ -0.2
CPNE8-207ENST00000550863 SYN1P17600 705 aa13.78□□□□□ -0.2
CPNE8-207ENST00000550863 PTPREP23469 700 aa13.78□□□□□ -0.2
CPNE8-207ENST00000550863 GRB14Q14449 540 aa13.78□□□□□ -0.2
CPNE8-207ENST00000550863 PLS1Q14651 629 aa13.78□□□□□ -0.2
CPNE8-207ENST00000550863 GTF3C2Q8WUA4 911 aaPredicted RBP13.78□□□□□ -0.2
CPNE8-207ENST00000550863 PRO3102Q9H379 93 aa13.78□□□□□ -0.2
CPNE8-207ENST00000550863 VCPKMTQ9H867 229 aa13.78□□□□□ -0.2
CPNE8-207ENST00000550863 TMX2Q9Y320 296 aa13.78□□□□□ -0.2
CPNE8-207ENST00000550863 RAD21O60216 631 aa13.77□□□□□ -0.21
CPNE8-207ENST00000550863 PRDM1O75626 825 aa13.77□□□□□ -0.21
CPNE8-207ENST00000550863 XRCC5P13010 732 aaKnown RBP13.77□□□□□ -0.21
CPNE8-207ENST00000550863 ERCC3P19447 782 aa13.77□□□□□ -0.21
CPNE8-207ENST00000550863 RASA1P20936 1047 aa13.77□□□□□ -0.21
CPNE8-207ENST00000550863 ADORA2AP29274 412 aa13.77□□□□□ -0.21
CPNE8-207ENST00000550863 LAMA4Q16363 1823 aa13.77□□□□□ -0.21
CPNE8-207ENST00000550863 ANO1Q5XXA6 986 aa13.77□□□□□ -0.21
CPNE8-207ENST00000550863 LHX8Q68G74 356 aa13.77□□□□□ -0.21
CPNE8-207ENST00000550863 CCDC129Q6ZRS4 1044 aa13.77□□□□□ -0.21
CPNE8-207ENST00000550863 APPBP2Q92624 585 aa13.77□□□□□ -0.21
CPNE8-207ENST00000550863 SALL3Q9BXA9 1300 aa13.77□□□□□ -0.21
CPNE8-207ENST00000550863 SPATC1LQ9H0A9 340 aa13.77□□□□□ -0.21
CPNE8-207ENST00000550863 ARHGEF10LQ9HCE6 1279 aa13.77□□□□□ -0.21
CPNE8-207ENST00000550863 ARPP21Q9UBL0 812 aaPredicted RBP13.77□□□□□ -0.21
CPNE8-207ENST00000550863 OGDHLQ9ULD0 1010 aa13.77□□□□□ -0.21
CPNE8-207ENST00000550863 MINDY4BA8MYZ0 360 aa13.76□□□□□ -0.21
CPNE8-207ENST00000550863 RNF113AO15541 343 aaKnown RBP13.76□□□□□ -0.21
CPNE8-207ENST00000550863 DSG3P32926 999 aa13.76□□□□□ -0.21
CPNE8-207ENST00000550863 FAM83BQ5T0W9 1011 aa13.76□□□□□ -0.21
CPNE8-207ENST00000550863 ZSCAN25Q6NSZ9 544 aa13.76□□□□□ -0.21
CPNE8-207ENST00000550863 RASGRP2Q7LDG7 609 aa13.76□□□□□ -0.21
CPNE8-207ENST00000550863 NECAB2Q7Z6G3 386 aa13.76□□□□□ -0.21
CPNE8-207ENST00000550863 C11orf49Q9H6J7 331 aa13.76□□□□□ -0.21
CPNE8-207ENST00000550863 SLC15A5A6NIM6 579 aa13.75□□□□□ -0.21
CPNE8-207ENST00000550863 SOX1O00570 391 aaPredicted RBP13.75□□□□□ -0.21
CPNE8-207ENST00000550863 FOXP2O15409 715 aa13.75□□□□□ -0.21
CPNE8-207ENST00000550863 COBLO75128 1261 aa13.75□□□□□ -0.21
CPNE8-207ENST00000550863 CCNA1P78396 465 aa13.75□□□□□ -0.21
CPNE8-207ENST00000550863 COG2Q14746 738 aa13.75□□□□□ -0.21
CPNE8-207ENST00000550863 TMEM132BQ14DG7 1078 aa13.75□□□□□ -0.21
CPNE8-207ENST00000550863 NCAPG2Q86XI2 1143 aa13.75□□□□□ -0.21
CPNE8-207ENST00000550863 CHMP4CQ96CF2 233 aa13.75□□□□□ -0.21
CPNE8-207ENST00000550863 STAP2Q9UGK3 403 aa13.75□□□□□ -0.21
CPNE8-207ENST00000550863 IVNS1ABPQ9Y6Y0 642 aa13.75□□□□□ -0.21
CPNE8-207ENST00000550863 WDR46O15213 610 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms