RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 CNTNAP5Q8WYK1 1306 aa14.53□□□□□ -0.08
CACNB3-217ENST00000550483 hCG_1984214I3L0E3 225 aa14.53□□□□□ -0.08
CACNB3-217ENST00000550483 PARP1P09874 1014 aaKnown RBP14.53□□□□□ -0.08
CACNB3-217ENST00000550483 KIF23Q02241 960 aaPredicted RBP14.53□□□□□ -0.08
CACNB3-217ENST00000550483 FUT2Q10981 343 aa14.53□□□□□ -0.08
CACNB3-217ENST00000550483 CERKLQ49MI3 558 aaPredicted RBP14.53□□□□□ -0.08
CACNB3-217ENST00000550483 USP48Q86UV5 1035 aa14.53□□□□□ -0.08
CACNB3-217ENST00000550483 ZNF713Q8N859 430 aaPredicted RBP14.53□□□□□ -0.08
CACNB3-217ENST00000550483 HOOK2Q96ED9 719 aa14.53□□□□□ -0.08
CACNB3-217ENST00000550483 CEP95Q96GE4 821 aa14.53□□□□□ -0.08
CACNB3-217ENST00000550483 SPATA32Q96LK8 384 aa14.53□□□□□ -0.08
CACNB3-217ENST00000550483 CSRNP1Q96S65 589 aa14.53□□□□□ -0.08
CACNB3-217ENST00000550483 SPZ1Q9BXG8 430 aa14.53□□□□□ -0.08
CACNB3-217ENST00000550483 FOXP1Q9H334 677 aaPredicted RBP14.53□□□□□ -0.08
CACNB3-217ENST00000550483 GINM1Q9NU53 330 aa14.53□□□□□ -0.08
CACNB3-217ENST00000550483 NYAP2Q9P242 653 aa14.53□□□□□ -0.08
CACNB3-217ENST00000550483 CNPY2Q9Y2B0 182 aa14.53□□□□□ -0.08
CACNB3-217ENST00000550483 ZBTB12Q9Y330 459 aaPredicted RBP14.53□□□□□ -0.08
CACNB3-217ENST00000550483 PALM3A6NDB9 673 aaPredicted RBP14.52□□□□□ -0.09
CACNB3-217ENST00000550483 DDTLA6NHG4 134 aaPredicted RBP14.52□□□□□ -0.09
CACNB3-217ENST00000550483 FIBPO43427 364 aa14.52□□□□□ -0.09
CACNB3-217ENST00000550483 YEATS4O95619 227 aa14.52□□□□□ -0.09
CACNB3-217ENST00000550483 MMP1P03956 469 aa14.52□□□□□ -0.09
CACNB3-217ENST00000550483 AKR1B1P15121 316 aa14.52□□□□□ -0.09
CACNB3-217ENST00000550483 U2AF2P26368 475 aaKnown RBP eCLIP14.52□□□□□ -0.09
CACNB3-217ENST00000550483 CALML3P27482 149 aa14.52□□□□□ -0.09
CACNB3-217ENST00000550483 TCP10Q12799 353 aa14.52□□□□□ -0.09
CACNB3-217ENST00000550483 GSE1Q14687 1217 aa14.52□□□□□ -0.09
CACNB3-217ENST00000550483 GPATCH4Q5T3I0 446 aaKnown RBP14.52□□□□□ -0.09
CACNB3-217ENST00000550483 GALNT17Q6IS24 598 aa14.52□□□□□ -0.09
CACNB3-217ENST00000550483 CCDC148Q8NFR7 591 aa14.52□□□□□ -0.09
CACNB3-217ENST00000550483 CCDC12Q8WUD4 166 aaPredicted RBP14.52□□□□□ -0.09
CACNB3-217ENST00000550483 CABP5Q9NP86 173 aa14.52□□□□□ -0.09
CACNB3-217ENST00000550483 POLR3EQ9NVU0 708 aa14.52□□□□□ -0.09
CACNB3-217ENST00000550483 GOLGA6L4A6NEF3 574 aa14.51□□□□□ -0.09
CACNB3-217ENST00000550483 POTEIP0CG38 1075 aa14.51□□□□□ -0.09
CACNB3-217ENST00000550483 POTEJP0CG39 1038 aa14.51□□□□□ -0.09
CACNB3-217ENST00000550483 SNHG28P0DPA3 235 aa14.51□□□□□ -0.09
CACNB3-217ENST00000550483 SCG2P13521 617 aa14.51□□□□□ -0.09
CACNB3-217ENST00000550483 PFKFB3Q16875 520 aaPredicted RBP14.51□□□□□ -0.09
CACNB3-217ENST00000550483 RBM26Q5T8P6 1007 aaKnown RBP14.51□□□□□ -0.09
CACNB3-217ENST00000550483 SH3BP5LQ7L8J4 393 aa14.51□□□□□ -0.09
CACNB3-217ENST00000550483 GPC2Q8N158 579 aa14.51□□□□□ -0.09
CACNB3-217ENST00000550483 KCNG4Q8TDN1 519 aa14.51□□□□□ -0.09
CACNB3-217ENST00000550483 MKL1Q969V6 931 aa14.51□□□□□ -0.09
CACNB3-217ENST00000550483 RTEL1Q9NZ71 1219 aa14.51□□□□□ -0.09
CACNB3-217ENST00000550483 GREB1LQ9C091 1923 aaPredicted RBP14.51□□□□□ -0.09
CACNB3-217ENST00000550483 H7C1D1 291 aa14.5□□□□□ -0.09
CACNB3-217ENST00000550483 MPHOSPH10O00566 681 aaKnown RBP14.5□□□□□ -0.09
CACNB3-217ENST00000550483 WNT10BO00744 389 aa14.5□□□□□ -0.09
CACNB3-217ENST00000550483 LETM1O95202 739 aaPredicted RBP14.5□□□□□ -0.09
CACNB3-217ENST00000550483 PLEKHA8P1O95397 391 aa14.5□□□□□ -0.09
CACNB3-217ENST00000550483 CACNB3P54284 484 aa14.5□□□□□ -0.09
CACNB3-217ENST00000550483 ABCB5Q2M3G0 1257 aa14.5□□□□□ -0.09
CACNB3-217ENST00000550483 RILPL1Q5EBL4 403 aa14.5□□□□□ -0.09
CACNB3-217ENST00000550483 MYSM1Q5VVJ2 828 aa14.5□□□□□ -0.09
CACNB3-217ENST00000550483 SRBD1Q8N5C6 995 aaKnown RBP14.5□□□□□ -0.09
CACNB3-217ENST00000550483 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.5□□□□□ -0.09
CACNB3-217ENST00000550483 DNAJC18Q9H819 358 aa14.5□□□□□ -0.09
CACNB3-217ENST00000550483 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.5□□□□□ -0.09
CACNB3-217ENST00000550483 MAD2L2Q9UI95 211 aa14.5□□□□□ -0.09
CACNB3-217ENST00000550483 RCOR1Q9UKL0 485 aa14.5□□□□□ -0.09
CACNB3-217ENST00000550483 PCDHAC2Q9Y5I4 1007 aa14.5□□□□□ -0.09
CACNB3-217ENST00000550483 V9GY48 417 aaPredicted RBP14.5□□□□□ -0.09
CACNB3-217ENST00000550483 MYH8P13535 1937 aa14.49□□□□□ -0.09
CACNB3-217ENST00000550483 TCP10L2B9ZVM9 353 aa14.49□□□□□ -0.09
CACNB3-217ENST00000550483 BMP15O95972 392 aa14.49□□□□□ -0.09
CACNB3-217ENST00000550483 KRT2P35908 639 aa14.49□□□□□ -0.09
CACNB3-217ENST00000550483 NASPP49321 788 aaPredicted RBP14.49□□□□□ -0.09
CACNB3-217ENST00000550483 GMPSP49915 693 aaPredicted RBP14.49□□□□□ -0.09
CACNB3-217ENST00000550483 GUCY1B3Q02153 619 aa14.49□□□□□ -0.09
CACNB3-217ENST00000550483 PKN1Q16512 942 aa14.49□□□□□ -0.09
CACNB3-217ENST00000550483 NOSTRINQ8IVI9 506 aa14.49□□□□□ -0.09
CACNB3-217ENST00000550483 ZFPM1Q8IX07 1006 aa14.49□□□□□ -0.09
CACNB3-217ENST00000550483 MICALL2Q8IY33 904 aa14.49□□□□□ -0.09
CACNB3-217ENST00000550483 DIS3L2Q8IYB7 885 aaKnown RBP14.49□□□□□ -0.09
CACNB3-217ENST00000550483 DCAF4Q8WV16 495 aa14.49□□□□□ -0.09
CACNB3-217ENST00000550483 LEO1Q8WVC0 666 aaPredicted RBP14.49□□□□□ -0.09
CACNB3-217ENST00000550483 PHF20Q9BVI0 1012 aa14.49□□□□□ -0.09
CACNB3-217ENST00000550483 SH2D4AQ9H788 454 aa14.49□□□□□ -0.09
CACNB3-217ENST00000550483 VEZTQ9HBM0 779 aa14.49□□□□□ -0.09
CACNB3-217ENST00000550483 SEC63Q9UGP8 760 aaKnown RBP14.49□□□□□ -0.09
CACNB3-217ENST00000550483 PPP2R3BQ9Y5P8 575 aa14.49□□□□□ -0.09
CACNB3-217ENST00000550483 MORC2Q9Y6X9 1032 aaPredicted RBP14.49□□□□□ -0.09
CACNB3-217ENST00000550483 CNTNAP1P78357 1384 aa14.48□□□□□ -0.09
CACNB3-217ENST00000550483 ZC3H4Q9UPT8 1303 aaKnown RBP14.48□□□□□ -0.09
CACNB3-217ENST00000550483 CLRN2A0PK11 232 aa14.48□□□□□ -0.09
CACNB3-217ENST00000550483 KLRF2D3W0D1 207 aa14.48□□□□□ -0.09
CACNB3-217ENST00000550483 PDHBP11177 359 aa14.48□□□□□ -0.09
CACNB3-217ENST00000550483 MAP3K10Q02779 954 aa14.48□□□□□ -0.09
CACNB3-217ENST00000550483 ICA1Q05084 483 aa14.48□□□□□ -0.09
CACNB3-217ENST00000550483 FOXD4L6Q3SYB3 417 aaPredicted RBP14.48□□□□□ -0.09
CACNB3-217ENST00000550483 FOXD4L3Q6VB84 417 aaPredicted RBP14.48□□□□□ -0.09
CACNB3-217ENST00000550483 APOBEC3FQ8IUX4 373 aaKnown RBP14.48□□□□□ -0.09
CACNB3-217ENST00000550483 GMCL1P1Q8NEA9 526 aa14.48□□□□□ -0.09
CACNB3-217ENST00000550483 RRP36Q96EU6 259 aaKnown RBP14.48□□□□□ -0.09
CACNB3-217ENST00000550483 CREBZFQ9NS37 354 aa14.48□□□□□ -0.09
CACNB3-217ENST00000550483 CLIP2Q9UDT6 1046 aa14.48□□□□□ -0.09
CACNB3-217ENST00000550483 CNOT7Q9UIV1 285 aaKnown RBP14.48□□□□□ -0.09
CACNB3-217ENST00000550483 CEP131Q9UPN4 1083 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms