RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 ZBTB43O43298 467 aa12.65□□□□□ -0.38
LINC00661-204ENST00000549354 MTF1Q14872 753 aa12.65□□□□□ -0.38
LINC00661-204ENST00000549354 NCAPHQ15003 741 aa12.65□□□□□ -0.38
LINC00661-204ENST00000549354 NOM1Q5C9Z4 860 aaKnown RBP12.65□□□□□ -0.38
LINC00661-204ENST00000549354 NEK11Q8NG66 645 aa12.65□□□□□ -0.38
LINC00661-204ENST00000549354 KCNG4Q8TDN1 519 aa12.65□□□□□ -0.38
LINC00661-204ENST00000549354 OXER1Q8TDS5 423 aa12.65□□□□□ -0.38
LINC00661-204ENST00000549354 GDAP1L1Q96MZ0 367 aa12.65□□□□□ -0.38
LINC00661-204ENST00000549354 ATP8A2Q9NTI2 1148 aa12.65□□□□□ -0.38
LINC00661-204ENST00000549354 SRGNP10124 158 aa12.65□□□□□ -0.38
LINC00661-204ENST00000549354 TOP1P11387 765 aaKnown RBP12.65□□□□□ -0.38
LINC00661-204ENST00000549354 NT5C2P49902 561 aa12.65□□□□□ -0.38
LINC00661-204ENST00000549354 PPP4CP60510 307 aa12.65□□□□□ -0.38
LINC00661-204ENST00000549354 ATL3Q6DD88 541 aa12.65□□□□□ -0.38
LINC00661-204ENST00000549354 VPS54Q9P1Q0 977 aa12.65□□□□□ -0.38
LINC00661-204ENST00000549354 MKRN1Q9UHC7 482 aaKnown RBP12.65□□□□□ -0.38
LINC00661-204ENST00000549354 DLEC1Q9Y238 1755 aa12.65□□□□□ -0.39
LINC00661-204ENST00000549354 CCT6AP40227 531 aaKnown RBP12.64□□□□□ -0.39
LINC00661-204ENST00000549354 NLRP12P59046 1061 aa12.64□□□□□ -0.39
LINC00661-204ENST00000549354 PDE4BQ07343 736 aa12.64□□□□□ -0.39
LINC00661-204ENST00000549354 CTR9Q6PD62 1173 aa12.64□□□□□ -0.39
LINC00661-204ENST00000549354 TMTC2Q8N394 836 aa12.64□□□□□ -0.39
LINC00661-204ENST00000549354 TBC1D16Q8TBP0 767 aa12.64□□□□□ -0.39
LINC00661-204ENST00000549354 BLZF1Q9H2G9 400 aa12.64□□□□□ -0.39
LINC00661-204ENST00000549354 CD209Q9NNX6 404 aa12.64□□□□□ -0.39
LINC00661-204ENST00000549354 FAM217BQ9NTX9 383 aaPredicted RBP12.64□□□□□ -0.39
LINC00661-204ENST00000549354 ATP6V0A2Q9Y487 856 aa12.64□□□□□ -0.39
LINC00661-204ENST00000549354 EP400Q96L91 3159 aa12.64□□□□□ -0.39
LINC00661-204ENST00000549354 PHACTR2O75167 634 aa12.64□□□□□ -0.39
LINC00661-204ENST00000549354 PRR29P0C7W0 189 aa12.64□□□□□ -0.39
LINC00661-204ENST00000549354 NPR1P16066 1061 aa12.64□□□□□ -0.39
LINC00661-204ENST00000549354 KIF23Q02241 960 aaPredicted RBP12.64□□□□□ -0.39
LINC00661-204ENST00000549354 POLLQ9UGP5 575 aa12.64□□□□□ -0.39
LINC00661-204ENST00000549354 COL11A2P13942 1736 aaPredicted RBP12.64□□□□□ -0.39
LINC00661-204ENST00000549354 NTRK3Q16288 839 aa12.64□□□□□ -0.39
LINC00661-204ENST00000549354 AXDND1Q5T1B0 1012 aaPredicted RBP12.64□□□□□ -0.39
LINC00661-204ENST00000549354 OLFM4Q6UX06 510 aa12.64□□□□□ -0.39
LINC00661-204ENST00000549354 CRNKL1Q9BZJ0 848 aaKnown RBP12.64□□□□□ -0.39
LINC00661-204ENST00000549354 OSBPL5Q9H0X9 879 aaPredicted RBP12.64□□□□□ -0.39
LINC00661-204ENST00000549354 SAMSN1Q9NSI8 373 aaKnown RBP12.64□□□□□ -0.39
LINC00661-204ENST00000549354 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.64□□□□□ -0.39
LINC00661-204ENST00000549354 UFL1O94874 794 aa12.63□□□□□ -0.39
LINC00661-204ENST00000549354 ETF1P62495 437 aaKnown RBP12.63□□□□□ -0.39
LINC00661-204ENST00000549354 GSTO1P78417 241 aa12.63□□□□□ -0.39
LINC00661-204ENST00000549354 GABPB1Q06547 395 aaPredicted RBP12.63□□□□□ -0.39
LINC00661-204ENST00000549354 SEC23AQ15436 765 aa12.63□□□□□ -0.39
LINC00661-204ENST00000549354 CPLX2Q6PUV4 134 aaKnown RBP12.63□□□□□ -0.39
LINC00661-204ENST00000549354 BBXQ8WY36 941 aaPredicted RBP12.63□□□□□ -0.39
LINC00661-204ENST00000549354 WDR24Q96S15 920 aa12.63□□□□□ -0.39
LINC00661-204ENST00000549354 DCP1AQ9NPI6 582 aaPredicted RBP12.63□□□□□ -0.39
LINC00661-204ENST00000549354 FAM205AQ6ZU69 1335 aa12.63□□□□□ -0.39
LINC00661-204ENST00000549354 PPEF1O14829 653 aaPredicted RBP12.63□□□□□ -0.39
LINC00661-204ENST00000549354 ORC4O43929 436 aa12.63□□□□□ -0.39
LINC00661-204ENST00000549354 RAD21O60216 631 aa12.63□□□□□ -0.39
LINC00661-204ENST00000549354 LDHBP07195 334 aaKnown RBP12.63□□□□□ -0.39
LINC00661-204ENST00000549354 PNMA6AP0CW24 399 aaPredicted RBP12.63□□□□□ -0.39
LINC00661-204ENST00000549354 SYCP1Q15431 976 aa12.63□□□□□ -0.39
LINC00661-204ENST00000549354 ZNF174Q15697 407 aa12.63□□□□□ -0.39
LINC00661-204ENST00000549354 SHC4Q6S5L8 630 aa12.63□□□□□ -0.39
LINC00661-204ENST00000549354 TMCO3Q6UWJ1 677 aa12.63□□□□□ -0.39
LINC00661-204ENST00000549354 CERS3Q8IU89 383 aa12.63□□□□□ -0.39
LINC00661-204ENST00000549354 FOXP4Q8IVH2 680 aaPredicted RBP12.63□□□□□ -0.39
LINC00661-204ENST00000549354 CCDC150Q8NCX0 1101 aa12.63□□□□□ -0.39
LINC00661-204ENST00000549354 FAM163AQ96GL9 167 aaPredicted RBP12.63□□□□□ -0.39
LINC00661-204ENST00000549354 SERTAD1Q9UHV2 236 aa12.63□□□□□ -0.39
LINC00661-204ENST00000549354 PDE6BP35913 854 aa12.62□□□□□ -0.39
LINC00661-204ENST00000549354 DIS3L2Q8IYB7 885 aaKnown RBP12.62□□□□□ -0.39
LINC00661-204ENST00000549354 TFR2Q9UP52 801 aa12.62□□□□□ -0.39
LINC00661-204ENST00000549354 PCDHB6Q9Y5E3 794 aa12.62□□□□□ -0.39
LINC00661-204ENST00000549354 STK36Q9NRP7 1315 aa12.62□□□□□ -0.39
LINC00661-204ENST00000549354 BAZ2AQ9UIF9 1905 aaKnown RBP12.62□□□□□ -0.39
LINC00661-204ENST00000549354 CDKL5O76039 1030 aa12.62□□□□□ -0.39
LINC00661-204ENST00000549354 MRPS25P82663 173 aaKnown RBP12.62□□□□□ -0.39
LINC00661-204ENST00000549354 BMS1Q14692 1282 aaKnown RBP12.62□□□□□ -0.39
LINC00661-204ENST00000549354 WWC2Q6AWC2 1192 aa12.62□□□□□ -0.39
LINC00661-204ENST00000549354 ESR2Q92731 530 aa12.62□□□□□ -0.39
LINC00661-204ENST00000549354 CAMKK2Q96RR4 588 aa12.62□□□□□ -0.39
LINC00661-204ENST00000549354 PLEKHA4Q9H4M7 779 aa12.62□□□□□ -0.39
LINC00661-204ENST00000549354 NMT2O60551 498 aa12.62□□□□□ -0.39
LINC00661-204ENST00000549354 DNA2P51530 1060 aa12.62□□□□□ -0.39
LINC00661-204ENST00000549354 EPSTI1Q96J88 318 aa12.62□□□□□ -0.39
LINC00661-204ENST00000549354 ARPP21Q9UBL0 812 aaPredicted RBP12.62□□□□□ -0.39
LINC00661-204ENST00000549354 KCNH3Q9ULD8 1083 aa12.62□□□□□ -0.39
LINC00661-204ENST00000549354 NFE2L3Q9Y4A8 694 aa12.62□□□□□ -0.39
LINC00661-204ENST00000549354 FHOD1Q9Y613 1164 aa12.62□□□□□ -0.39
LINC00661-204ENST00000549354 ALDH1B1P30837 517 aa12.61□□□□□ -0.39
LINC00661-204ENST00000549354 AKAP17AQ02040 695 aaKnown RBP12.61□□□□□ -0.39
LINC00661-204ENST00000549354 SART3Q15020 963 aaKnown RBP12.61□□□□□ -0.39
LINC00661-204ENST00000549354 FAM47AQ5JRC9 791 aa12.61□□□□□ -0.39
LINC00661-204ENST00000549354 POTEAQ6S8J7 498 aa12.61□□□□□ -0.39
LINC00661-204ENST00000549354 TOGARAM2Q6ZUX3 1019 aa12.61□□□□□ -0.39
LINC00661-204ENST00000549354 HSD3B7Q9H2F3 369 aa12.61□□□□□ -0.39
LINC00661-204ENST00000549354 RABEP2Q9H5N1 569 aa12.61□□□□□ -0.39
LINC00661-204ENST00000549354 AATFQ9NY61 560 aaKnown RBP eCLIP12.61□□□□□ -0.39
LINC00661-204ENST00000549354 ROBO3Q96MS0 1386 aa12.61□□□□□ -0.39
LINC00661-204ENST00000549354 LDHCP07864 332 aa12.61□□□□□ -0.39
LINC00661-204ENST00000549354 MMP10P09238 476 aa12.61□□□□□ -0.39
LINC00661-204ENST00000549354 MYL5Q02045 173 aa12.61□□□□□ -0.39
LINC00661-204ENST00000549354 PPP2R5BQ15173 497 aa12.61□□□□□ -0.39
LINC00661-204ENST00000549354 DZIP1Q86YF9 867 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms