RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 UQCRFS1P1P0C7P4 283 aa14.92□□□□□ -0.02
DDX54-206ENST00000549271 G3BP1Q13283 466 aaKnown RBP eCLIP14.92□□□□□ -0.02
DDX54-206ENST00000549271 GORABQ5T7V8 394 aa14.92□□□□□ -0.02
DDX54-206ENST00000549271 CATSPERGQ6ZRH7 1159 aa14.92□□□□□ -0.02
DDX54-206ENST00000549271 PHF24Q9UPV7 400 aa14.92□□□□□ -0.02
DDX54-206ENST00000549271 PIEZO1Q92508 2521 aa14.92□□□□□ -0.02
DDX54-206ENST00000549271 RAG1P15918 1043 aa14.91□□□□□ -0.02
DDX54-206ENST00000549271 MCAMP43121 646 aa14.91□□□□□ -0.02
DDX54-206ENST00000549271 PI16Q6UXB8 463 aa14.91□□□□□ -0.02
DDX54-206ENST00000549271 ZNFX1Q9P2E3 1918 aaKnown RBP14.91□□□□□ -0.02
DDX54-206ENST00000549271 TRANK1O15050 2925 aa14.9□□□□□ -0.02
DDX54-206ENST00000549271 A0A0G2JMZ2 1700 aa14.9□□□□□ -0.02
DDX54-206ENST00000549271 MYCNP04198 464 aaPredicted RBP14.9□□□□□ -0.02
DDX54-206ENST00000549271 ADORA2AP29274 412 aa14.9□□□□□ -0.02
DDX54-206ENST00000549271 POLA2Q14181 598 aa14.9□□□□□ -0.02
DDX54-206ENST00000549271 ADGRE1Q14246 886 aa14.9□□□□□ -0.02
DDX54-206ENST00000549271 FAM47AQ5JRC9 791 aa14.9□□□□□ -0.02
DDX54-206ENST00000549271 TBC1D9Q6ZT07 1266 aa14.9□□□□□ -0.02
DDX54-206ENST00000549271 DPP9Q86TI2 863 aa14.9□□□□□ -0.02
DDX54-206ENST00000549271 PBX4Q9BYU1 374 aa14.9□□□□□ -0.02
DDX54-206ENST00000549271 PRDM12Q9H4Q4 367 aa14.9□□□□□ -0.02
DDX54-206ENST00000549271 RAI14Q9P0K7 980 aa14.9□□□□□ -0.02
DDX54-206ENST00000549271 GBF1Q92538 1859 aa14.89□□□□□ -0.03
DDX54-206ENST00000549271 SPDYE16A6NNV3 312 aaPredicted RBP14.89□□□□□ -0.03
DDX54-206ENST00000549271 STRNO43815 780 aa14.89□□□□□ -0.03
DDX54-206ENST00000549271 PBX2P40425 430 aa14.89□□□□□ -0.03
DDX54-206ENST00000549271 PPP4CP60510 307 aa14.89□□□□□ -0.03
DDX54-206ENST00000549271 ZYXQ15942 572 aaKnown RBP14.89□□□□□ -0.03
DDX54-206ENST00000549271 CRACR2BQ8N4Y2 399 aaPredicted RBP14.89□□□□□ -0.03
DDX54-206ENST00000549271 SSH3Q8TE77 659 aa14.89□□□□□ -0.03
DDX54-206ENST00000549271 ZNF512BQ96KM6 892 aaPredicted RBP14.89□□□□□ -0.03
DDX54-206ENST00000549271 FLT1P17948 1338 aa14.89□□□□□ -0.03
DDX54-206ENST00000549271 MYH1P12882 1939 aa14.88□□□□□ -0.03
DDX54-206ENST00000549271 COBLO75128 1261 aa14.88□□□□□ -0.03
DDX54-206ENST00000549271 GH2P01242 217 aa14.88□□□□□ -0.03
DDX54-206ENST00000549271 BMP1P13497 986 aa14.88□□□□□ -0.03
DDX54-206ENST00000549271 VCAM1P19320 739 aa14.88□□□□□ -0.03
DDX54-206ENST00000549271 PRAMEF19Q5SWL8 479 aa14.88□□□□□ -0.03
DDX54-206ENST00000549271 RASIP1Q5U651 963 aa14.88□□□□□ -0.03
DDX54-206ENST00000549271 MAPKAPK5Q8IW41 473 aa14.88□□□□□ -0.03
DDX54-206ENST00000549271 FTSJ3Q8IY81 847 aaKnown RBP14.88□□□□□ -0.03
DDX54-206ENST00000549271 TGFBRAP1Q8WUH2 860 aa14.88□□□□□ -0.03
DDX54-206ENST00000549271 NECAB3Q96P71 396 aaPredicted RBP14.88□□□□□ -0.03
DDX54-206ENST00000549271 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.88□□□□□ -0.031e-7■□□□□ 8.5
DDX54-206ENST00000549271 KIAA1683Q9H0B3 1180 aa14.88□□□□□ -0.03
DDX54-206ENST00000549271 TMEM39AQ9NV64 488 aa14.88□□□□□ -0.03
DDX54-206ENST00000549271 LRP2BPQ9P2M1 347 aa14.88□□□□□ -0.03
DDX54-206ENST00000549271 PALD1Q9ULE6 856 aa14.88□□□□□ -0.03
DDX54-206ENST00000549271 MYO5AQ9Y4I1 1855 aaKnown RBP14.87□□□□□ -0.03
DDX54-206ENST00000549271 PQBP1O60828 265 aaKnown RBP14.87□□□□□ -0.03
DDX54-206ENST00000549271 BAG3O95817 575 aa14.87□□□□□ -0.03
DDX54-206ENST00000549271 PLCG2P16885 1265 aa14.87□□□□□ -0.03
DDX54-206ENST00000549271 USP14P54578 494 aa14.87□□□□□ -0.03
DDX54-206ENST00000549271 ATP8B2P98198 1209 aa14.87□□□□□ -0.03
DDX54-206ENST00000549271 FAAP100Q0VG06 881 aa14.87□□□□□ -0.03
DDX54-206ENST00000549271 CCDC85BQ15834 202 aaPredicted RBP14.87□□□□□ -0.03
DDX54-206ENST00000549271 TNNI3KQ59H18 835 aa14.87□□□□□ -0.03
DDX54-206ENST00000549271 ANKRD33Q7Z3H0 272 aa14.87□□□□□ -0.03
DDX54-206ENST00000549271 ITPRIPQ8IWB1 547 aa14.87□□□□□ -0.03
DDX54-206ENST00000549271 IL27Q8NEV9 243 aa14.87□□□□□ -0.03
DDX54-206ENST00000549271 PANK1Q8TE04 598 aa14.87□□□□□ -0.03
DDX54-206ENST00000549271 TOX2Q96NM4 488 aa14.87□□□□□ -0.03
DDX54-206ENST00000549271 FEZ1Q99689 392 aa14.87□□□□□ -0.03
DDX54-206ENST00000549271 MOV10L1Q9BXT6 1211 aaKnown RBP14.87□□□□□ -0.03
DDX54-206ENST00000549271 TRIM34Q9BYJ4 488 aa14.87□□□□□ -0.03
DDX54-206ENST00000549271 AATFQ9NY61 560 aaKnown RBP eCLIP14.87□□□□□ -0.03
DDX54-206ENST00000549271 CXXC1Q9P0U4 656 aaPredicted RBP14.87□□□□□ -0.03
DDX54-206ENST00000549271 NOP58Q9Y2X3 529 aaKnown RBP14.87□□□□□ -0.03
DDX54-206ENST00000549271 FPGT-TNNI3KV9GXZ4 949 aa14.87□□□□□ -0.03
DDX54-206ENST00000549271 A0A1W2PQ45 241 aaPredicted RBP14.86□□□□□ -0.03
DDX54-206ENST00000549271 A0A1W2PQY0 241 aa14.86□□□□□ -0.03
DDX54-206ENST00000549271 GRXCR1A8MXD5 290 aa14.86□□□□□ -0.03
DDX54-206ENST00000549271 CCDC158Q5M9N0 1113 aa14.86□□□□□ -0.03
DDX54-206ENST00000549271 NAA16Q6N069 864 aaPredicted RBP14.86□□□□□ -0.03
DDX54-206ENST00000549271 TATDN1Q6P1N9 297 aa14.86□□□□□ -0.03
DDX54-206ENST00000549271 C16orf59Q7L2K0 433 aa14.86□□□□□ -0.03
DDX54-206ENST00000549271 SLC44A5Q8NCS7 719 aa14.86□□□□□ -0.03
DDX54-206ENST00000549271 SHCBP1Q8NEM2 672 aa14.86□□□□□ -0.03
DDX54-206ENST00000549271 NOL10Q9BSC4 688 aaKnown RBP14.86□□□□□ -0.03
DDX54-206ENST00000549271 LRFN3Q9BTN0 628 aa14.86□□□□□ -0.03
DDX54-206ENST00000549271 C1orf115Q9H7X2 142 aa14.86□□□□□ -0.03
DDX54-206ENST00000549271 HCN4Q9Y3Q4 1203 aa14.86□□□□□ -0.03
DDX54-206ENST00000549271 TIMP1P01033 207 aa14.85□□□□□ -0.03
DDX54-206ENST00000549271 CYP2E1P05181 493 aaPredicted RBP14.85□□□□□ -0.03
DDX54-206ENST00000549271 TTC39AQ5SRH9 613 aa14.85□□□□□ -0.03
DDX54-206ENST00000549271 TMEM240Q5SV17 173 aa14.85□□□□□ -0.03
DDX54-206ENST00000549271 ADGRA1Q86SQ6 560 aa14.85□□□□□ -0.03
DDX54-206ENST00000549271 ACER1Q8TDN7 264 aa14.85□□□□□ -0.03
DDX54-206ENST00000549271 DBNDD2Q9BQY9 259 aa14.85□□□□□ -0.03
DDX54-206ENST00000549271 RPAP3Q9H6T3 665 aaPredicted RBP14.85□□□□□ -0.03
DDX54-206ENST00000549271 XPNPEP3Q9NQH7 507 aa14.85□□□□□ -0.03
DDX54-206ENST00000549271 TBX21Q9UL17 535 aa14.85□□□□□ -0.03
DDX54-206ENST00000549271 MUC6Q6W4X9 2439 aa14.85□□□□□ -0.03
DDX54-206ENST00000549271 ROBO3Q96MS0 1386 aa14.85□□□□□ -0.03
DDX54-206ENST00000549271 RARBP10826 455 aa14.84□□□□□ -0.03
DDX54-206ENST00000549271 ERCC3P19447 782 aa14.84□□□□□ -0.03
DDX54-206ENST00000549271 MFSD5Q6N075 450 aa14.84□□□□□ -0.03
DDX54-206ENST00000549271 CCDC129Q6ZRS4 1044 aa14.84□□□□□ -0.03
DDX54-206ENST00000549271 RNF180Q86T96 592 aa14.84□□□□□ -0.03
DDX54-206ENST00000549271 ABRAQ8N0Z2 381 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms