RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 COL11A1P12107 1806 aaPredicted RBP20.96■□□□□ 0.95
CHMP1A-205ENST00000548650 ICA1Q05084 483 aa20.95■□□□□ 0.94
CHMP1A-205ENST00000548650 CACNB2Q08289 660 aaPredicted RBP20.95■□□□□ 0.94
CHMP1A-205ENST00000548650 MAP2K5Q13163 448 aa20.95■□□□□ 0.94
CHMP1A-205ENST00000548650 KIAA1755Q5JYT7 1200 aa20.95■□□□□ 0.94
CHMP1A-205ENST00000548650 DCTPP1Q9H773 170 aa20.95■□□□□ 0.94
CHMP1A-205ENST00000548650 CWC22Q9HCG8 908 aaKnown RBP20.95■□□□□ 0.94
CHMP1A-205ENST00000548650 RBM27Q9P2N5 1060 aaKnown RBP20.95■□□□□ 0.94
CHMP1A-205ENST00000548650 USP17L12C9JPN9 530 aa20.94■□□□□ 0.94
CHMP1A-205ENST00000548650 USP17L21D6R901 530 aa20.94■□□□□ 0.94
CHMP1A-205ENST00000548650 EVI5O60447 810 aa20.94■□□□□ 0.94
CHMP1A-205ENST00000548650 GRB14Q14449 540 aa20.94■□□□□ 0.94
CHMP1A-205ENST00000548650 ZSCAN25Q6NSZ9 544 aa20.94■□□□□ 0.94
CHMP1A-205ENST00000548650 C16orf86Q6ZW13 317 aa20.94■□□□□ 0.94
CHMP1A-205ENST00000548650 SIAH1Q8IUQ4 282 aa20.94■□□□□ 0.94
CHMP1A-205ENST00000548650 TANGO6Q9C0B7 1094 aa20.94■□□□□ 0.94
CHMP1A-205ENST00000548650 SLC4A4Q9Y6R1 1079 aa20.94■□□□□ 0.94
CHMP1A-205ENST00000548650 SLC15A5A6NIM6 579 aa20.93■□□□□ 0.94
CHMP1A-205ENST00000548650 GLRX3O76003 335 aaKnown RBP20.93■□□□□ 0.94
CHMP1A-205ENST00000548650 PTPREP23469 700 aa20.93■□□□□ 0.94
CHMP1A-205ENST00000548650 CCND3P30281 292 aaPredicted RBP20.93■□□□□ 0.94
CHMP1A-205ENST00000548650 CDK8P49336 464 aa20.93■□□□□ 0.94
CHMP1A-205ENST00000548650 WDR78Q5VTH9 848 aa20.93■□□□□ 0.94
CHMP1A-205ENST00000548650 TSHZ3Q63HK5 1081 aa20.93■□□□□ 0.94
CHMP1A-205ENST00000548650 LPAR1Q92633 364 aa20.93■□□□□ 0.94
CHMP1A-205ENST00000548650 ARHGEF10LQ9HCE6 1279 aa20.93■□□□□ 0.94
CHMP1A-205ENST00000548650 FLRT1Q9NZU1 646 aa20.93■□□□□ 0.94
CHMP1A-205ENST00000548650 TMX2Q9Y320 296 aa20.93■□□□□ 0.94
CHMP1A-205ENST00000548650 HOXC6P09630 235 aa20.92■□□□□ 0.94
CHMP1A-205ENST00000548650 COG2Q14746 738 aa20.92■□□□□ 0.94
CHMP1A-205ENST00000548650 CTR9Q6PD62 1173 aa20.92■□□□□ 0.94
CHMP1A-205ENST00000548650 AMOTL1Q8IY63 956 aa20.92■□□□□ 0.94
CHMP1A-205ENST00000548650 KBTBD3Q8NAB2 608 aa20.92■□□□□ 0.94
CHMP1A-205ENST00000548650 DDRGK1Q96HY6 314 aa20.92■□□□□ 0.94
CHMP1A-205ENST00000548650 CCDC17Q96LX7 622 aa20.92■□□□□ 0.94
CHMP1A-205ENST00000548650 NBPF3Q9H094 633 aa20.92■□□□□ 0.94
CHMP1A-205ENST00000548650 ARPP21Q9UBL0 812 aaPredicted RBP20.92■□□□□ 0.94
CHMP1A-205ENST00000548650 ROBO3Q96MS0 1386 aa20.91■□□□□ 0.94
CHMP1A-205ENST00000548650 MOV10L1Q9BXT6 1211 aaKnown RBP20.91■□□□□ 0.94
CHMP1A-205ENST00000548650 C11orf49Q9H6J7 331 aa20.91■□□□□ 0.94
CHMP1A-205ENST00000548650 SH2D4AQ9H788 454 aa20.91■□□□□ 0.94
CHMP1A-205ENST00000548650 VCPKMTQ9H867 229 aa20.91■□□□□ 0.94
CHMP1A-205ENST00000548650 IVNS1ABPQ9Y6Y0 642 aa20.91■□□□□ 0.94
CHMP1A-205ENST00000548650 PFASO15067 1338 aa20.9■□□□□ 0.94
CHMP1A-205ENST00000548650 LHX8Q68G74 356 aa20.9■□□□□ 0.94
CHMP1A-205ENST00000548650 SPICE1Q8N0Z3 855 aa20.9■□□□□ 0.94
CHMP1A-205ENST00000548650 GPATCH3Q96I76 525 aa20.9■□□□□ 0.94
CHMP1A-205ENST00000548650 STRBPQ96SI9 672 aaKnown RBP20.9■□□□□ 0.94
CHMP1A-205ENST00000548650 MYH4Q9Y623 1939 aa20.89■□□□□ 0.93
CHMP1A-205ENST00000548650 IGHA2P01877 340 aa20.89■□□□□ 0.93
CHMP1A-205ENST00000548650 DSG3P32926 999 aa20.89■□□□□ 0.93
CHMP1A-205ENST00000548650 MB21D1Q8N884 522 aa20.89■□□□□ 0.93
CHMP1A-205ENST00000548650 SHCBP1Q8NEM2 672 aa20.89■□□□□ 0.93
CHMP1A-205ENST00000548650 NPLOC4Q8TAT6 608 aa20.89■□□□□ 0.93
CHMP1A-205ENST00000548650 APPBP2Q92624 585 aa20.89■□□□□ 0.93
CHMP1A-205ENST00000548650 OSBP2Q969R2 916 aa20.89■□□□□ 0.93
CHMP1A-205ENST00000548650 SPATC1LQ9H0A9 340 aa20.89■□□□□ 0.93
CHMP1A-205ENST00000548650 HOXC10Q9NYD6 342 aa20.89■□□□□ 0.93
CHMP1A-205ENST00000548650 SZT2Q5T011 3432 aa20.89■□□□□ 0.93
CHMP1A-205ENST00000548650 WDR46O15213 610 aaKnown RBP20.88■□□□□ 0.93
CHMP1A-205ENST00000548650 FLOT1O75955 427 aa20.88■□□□□ 0.93
CHMP1A-205ENST00000548650 COL6A1P12109 1028 aa20.88■□□□□ 0.93
CHMP1A-205ENST00000548650 C7orf61Q8IZ16 206 aa20.88■□□□□ 0.93
CHMP1A-205ENST00000548650 ATG4CQ96DT6 458 aa20.88■□□□□ 0.93
CHMP1A-205ENST00000548650 PCDHB15Q9Y5E8 787 aa20.88■□□□□ 0.93
CHMP1A-205ENST00000548650 ZNFX1Q9P2E3 1918 aaKnown RBP20.87■□□□□ 0.93
CHMP1A-205ENST00000548650 GSG1L2A8MUP6 293 aa20.87■□□□□ 0.93
CHMP1A-205ENST00000548650 EEF2P13639 858 aaKnown RBP20.87■□□□□ 0.93
CHMP1A-205ENST00000548650 ERCC3P19447 782 aa20.87■□□□□ 0.93
CHMP1A-205ENST00000548650 ADORA2AP29274 412 aa20.87■□□□□ 0.93
CHMP1A-205ENST00000548650 SBK1Q52WX2 424 aa20.87■□□□□ 0.93
CHMP1A-205ENST00000548650 MFSD14CQ5VZR4 134 aa20.87■□□□□ 0.93
CHMP1A-205ENST00000548650 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.87■□□□□ 0.93
CHMP1A-205ENST00000548650 KANSL2Q9H9L4 492 aa20.87■□□□□ 0.93
CHMP1A-205ENST00000548650 EPB41L4AQ9HCS5 686 aaPredicted RBP20.87■□□□□ 0.93
CHMP1A-205ENST00000548650 PLXNA1Q9UIW2 1896 aa20.87■□□□□ 0.93
CHMP1A-205ENST00000548650 RNF113AO15541 343 aaKnown RBP20.86■□□□□ 0.93
CHMP1A-205ENST00000548650 GIMAP6Q6P9H5 292 aa20.86■□□□□ 0.93
CHMP1A-205ENST00000548650 TTC41PQ6P2S7 1318 aa20.85■□□□□ 0.93
CHMP1A-205ENST00000548650 A0A1W2PPC1 479 aa20.85■□□□□ 0.93
CHMP1A-205ENST00000548650 M0R2C6 588 aa20.85■□□□□ 0.93
CHMP1A-205ENST00000548650 GPAA1O43292 621 aa20.85■□□□□ 0.93
CHMP1A-205ENST00000548650 CYBAP13498 195 aa20.85■□□□□ 0.93
CHMP1A-205ENST00000548650 RASA1P20936 1047 aa20.85■□□□□ 0.93
CHMP1A-205ENST00000548650 CYP2C19P33261 490 aa20.85■□□□□ 0.93
CHMP1A-205ENST00000548650 ATP2B2Q01814 1243 aa20.85■□□□□ 0.93
CHMP1A-205ENST00000548650 TRPV1Q8NER1 839 aa20.85■□□□□ 0.93
CHMP1A-205ENST00000548650 PI4K2BQ8TCG2 481 aa20.85■□□□□ 0.93
CHMP1A-205ENST00000548650 OTUD7AQ8TE49 926 aaPredicted RBP20.85■□□□□ 0.93
CHMP1A-205ENST00000548650 ZMYND8Q9ULU4 1186 aaPredicted RBP20.85■□□□□ 0.93
CHMP1A-205ENST00000548650 LAMA3Q16787 3333 aa20.85■□□□□ 0.93
CHMP1A-205ENST00000548650 STRNO43815 780 aa20.84■□□□□ 0.93
CHMP1A-205ENST00000548650 ZFYP08048 801 aaPredicted RBP20.84■□□□□ 0.93
CHMP1A-205ENST00000548650 OLFML2BQ68BL8 750 aa20.84■□□□□ 0.93
CHMP1A-205ENST00000548650 MROH8Q9H579 483 aa20.84■□□□□ 0.93
CHMP1A-205ENST00000548650 FBXO28Q9NVF7 368 aa20.84■□□□□ 0.93
CHMP1A-205ENST00000548650 DDX20Q9UHI6 824 aaKnown RBP20.84■□□□□ 0.93
CHMP1A-205ENST00000548650 COBLO75128 1261 aa20.83■□□□□ 0.93
CHMP1A-205ENST00000548650 RRP1P56182 461 aaKnown RBP20.83■□□□□ 0.93
CHMP1A-205ENST00000548650 PLS1Q14651 629 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms