RNA–Protein interactions for RNA: ENST00000548434.1

RAPGEF3-217, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 695 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-217ENST00000548434 FLRT1Q9NZU1 646 aa19.34■□□□□ 0.69
RAPGEF3-217ENST00000548434 TMX2Q9Y320 296 aa19.34■□□□□ 0.69
RAPGEF3-217ENST00000548434 COL11A1P12107 1806 aaPredicted RBP19.34■□□□□ 0.69
RAPGEF3-217ENST00000548434 ZNF236Q9UL36 1845 aa19.34■□□□□ 0.69
RAPGEF3-217ENST00000548434 GSG1L2A8MUP6 293 aa19.33■□□□□ 0.68
RAPGEF3-217ENST00000548434 TFRCP02786 760 aaKnown RBP19.33■□□□□ 0.68
RAPGEF3-217ENST00000548434 HOXC6P09630 235 aa19.33■□□□□ 0.68
RAPGEF3-217ENST00000548434 PTPREP23469 700 aa19.33■□□□□ 0.68
RAPGEF3-217ENST00000548434 SBK1Q52WX2 424 aa19.33■□□□□ 0.68
RAPGEF3-217ENST00000548434 ANKLE1Q8NAG6 615 aa19.33■□□□□ 0.68
RAPGEF3-217ENST00000548434 PAWRQ96IZ0 340 aaKnown RBP19.33■□□□□ 0.68
RAPGEF3-217ENST00000548434 HMX1Q9NP08 348 aaPredicted RBP19.33■□□□□ 0.68
RAPGEF3-217ENST00000548434 PCDH10Q9P2E7 1040 aa19.33■□□□□ 0.68
RAPGEF3-217ENST00000548434 SALL3Q9BXA9 1300 aa19.32■□□□□ 0.68
RAPGEF3-217ENST00000548434 MAP2K5Q13163 448 aa19.32■□□□□ 0.68
RAPGEF3-217ENST00000548434 GRB14Q14449 540 aa19.32■□□□□ 0.68
RAPGEF3-217ENST00000548434 COG2Q14746 738 aa19.32■□□□□ 0.68
RAPGEF3-217ENST00000548434 TSHZ3Q63HK5 1081 aa19.32■□□□□ 0.68
RAPGEF3-217ENST00000548434 PI4K2BQ8TCG2 481 aa19.32■□□□□ 0.68
RAPGEF3-217ENST00000548434 DPF3Q92784 378 aa19.32■□□□□ 0.68
RAPGEF3-217ENST00000548434 CCDC17Q96LX7 622 aa19.32■□□□□ 0.68
RAPGEF3-217ENST00000548434 BCL11AQ9H165 835 aa19.32■□□□□ 0.68
RAPGEF3-217ENST00000548434 ADAMTS5Q9UNA0 930 aa19.32■□□□□ 0.68
RAPGEF3-217ENST00000548434 SLC15A5A6NIM6 579 aa19.31■□□□□ 0.68
RAPGEF3-217ENST00000548434 PRKAR2AP13861 404 aaKnown RBP19.31■□□□□ 0.68
RAPGEF3-217ENST00000548434 TRMT44Q8IYL2 757 aaKnown RBP19.31■□□□□ 0.68
RAPGEF3-217ENST00000548434 NPLOC4Q8TAT6 608 aa19.31■□□□□ 0.68
RAPGEF3-217ENST00000548434 HTATIP2Q9BUP3 242 aa19.31■□□□□ 0.68
RAPGEF3-217ENST00000548434 SLC4A4Q9Y6R1 1079 aa19.31■□□□□ 0.68
RAPGEF3-217ENST00000548434 LAMA2P24043 3122 aaKnown RBP19.3■□□□□ 0.68
RAPGEF3-217ENST00000548434 RGS2P41220 211 aa19.3■□□□□ 0.68
RAPGEF3-217ENST00000548434 ZSCAN25Q6NSZ9 544 aa19.3■□□□□ 0.68
RAPGEF3-217ENST00000548434 GIMAP6Q6P9H5 292 aa19.3■□□□□ 0.68
RAPGEF3-217ENST00000548434 OTUD7AQ8TE49 926 aaPredicted RBP19.3■□□□□ 0.68
RAPGEF3-217ENST00000548434 APBA2Q99767 749 aa19.3■□□□□ 0.68
RAPGEF3-217ENST00000548434 MOV10L1Q9BXT6 1211 aaKnown RBP19.3■□□□□ 0.68
RAPGEF3-217ENST00000548434 VCPKMTQ9H867 229 aa19.3■□□□□ 0.68
RAPGEF3-217ENST00000548434 SMCHD1A6NHR9 2005 aa19.29■□□□□ 0.68
RAPGEF3-217ENST00000548434 MPHOSPH10O00566 681 aaKnown RBP19.29■□□□□ 0.68
RAPGEF3-217ENST00000548434 COL6A1P12109 1028 aa19.29■□□□□ 0.68
RAPGEF3-217ENST00000548434 CCND3P30281 292 aaPredicted RBP19.29■□□□□ 0.68
RAPGEF3-217ENST00000548434 DSG3P32926 999 aa19.29■□□□□ 0.68
RAPGEF3-217ENST00000548434 LPAR1Q92633 364 aa19.29■□□□□ 0.68
RAPGEF3-217ENST00000548434 EPB41L4AQ9HCS5 686 aaPredicted RBP19.29■□□□□ 0.68
RAPGEF3-217ENST00000548434 HOXC10Q9NYD6 342 aa19.29■□□□□ 0.68
RAPGEF3-217ENST00000548434 RBM27Q9P2N5 1060 aaKnown RBP19.29■□□□□ 0.68
RAPGEF3-217ENST00000548434 ROBO3Q96MS0 1386 aa19.29■□□□□ 0.68
RAPGEF3-217ENST00000548434 PFASO15067 1338 aa19.28■□□□□ 0.68
RAPGEF3-217ENST00000548434 RNF113AO15541 343 aaKnown RBP19.28■□□□□ 0.68
RAPGEF3-217ENST00000548434 CCNA1P78396 465 aa19.28■□□□□ 0.68
RAPGEF3-217ENST00000548434 NECAB2Q7Z6G3 386 aa19.28■□□□□ 0.68
RAPGEF3-217ENST00000548434 APPBP2Q92624 585 aa19.28■□□□□ 0.68
RAPGEF3-217ENST00000548434 IGKV6D-41A0A0C4DH26 115 aa19.27■□□□□ 0.68
RAPGEF3-217ENST00000548434 M0R2C6 588 aa19.27■□□□□ 0.68
RAPGEF3-217ENST00000548434 EEF2P13639 858 aaKnown RBP19.27■□□□□ 0.68
RAPGEF3-217ENST00000548434 ZKSCAN1P17029 563 aaPredicted RBP19.27■□□□□ 0.68
RAPGEF3-217ENST00000548434 RASA1P20936 1047 aa19.27■□□□□ 0.68
RAPGEF3-217ENST00000548434 ICA1Q05084 483 aa19.27■□□□□ 0.68
RAPGEF3-217ENST00000548434 CHRDL2Q6WN34 429 aa19.27■□□□□ 0.68
RAPGEF3-217ENST00000548434 SHCBP1Q8NEM2 672 aa19.27■□□□□ 0.68
RAPGEF3-217ENST00000548434 TRPV1Q8NER1 839 aa19.27■□□□□ 0.68
RAPGEF3-217ENST00000548434 SPATC1LQ9H0A9 340 aa19.27■□□□□ 0.68
RAPGEF3-217ENST00000548434 TTC41PQ6P2S7 1318 aa19.26■□□□□ 0.67
RAPGEF3-217ENST00000548434 MYH4Q9Y623 1939 aa19.26■□□□□ 0.67
RAPGEF3-217ENST00000548434 FOXP2O15409 715 aa19.26■□□□□ 0.67
RAPGEF3-217ENST00000548434 COBLO75128 1261 aa19.26■□□□□ 0.67
RAPGEF3-217ENST00000548434 RRP1P56182 461 aaKnown RBP19.26■□□□□ 0.67
RAPGEF3-217ENST00000548434 REPS2Q8NFH8 660 aa19.26■□□□□ 0.67
RAPGEF3-217ENST00000548434 ATG4CQ96DT6 458 aa19.26■□□□□ 0.67
RAPGEF3-217ENST00000548434 KANSL2Q9H9L4 492 aa19.26■□□□□ 0.67
RAPGEF3-217ENST00000548434 WDR46O15213 610 aaKnown RBP19.25■□□□□ 0.67
RAPGEF3-217ENST00000548434 SPICE1Q8N0Z3 855 aa19.25■□□□□ 0.67
RAPGEF3-217ENST00000548434 MB21D1Q8N884 522 aa19.25■□□□□ 0.67
RAPGEF3-217ENST00000548434 NBPF3Q9H094 633 aa19.25■□□□□ 0.67
RAPGEF3-217ENST00000548434 ARHGEF10LQ9HCE6 1279 aa19.25■□□□□ 0.67
RAPGEF3-217ENST00000548434 FBXO28Q9NVF7 368 aa19.25■□□□□ 0.67
RAPGEF3-217ENST00000548434 ARPP21Q9UBL0 812 aaPredicted RBP19.25■□□□□ 0.67
RAPGEF3-217ENST00000548434 NR2E3Q9Y5X4 410 aa19.25■□□□□ 0.67
RAPGEF3-217ENST00000548434 GPAA1O43292 621 aa19.24■□□□□ 0.67
RAPGEF3-217ENST00000548434 STRNO43815 780 aa19.24■□□□□ 0.67
RAPGEF3-217ENST00000548434 ZFYP08048 801 aaPredicted RBP19.24■□□□□ 0.67
RAPGEF3-217ENST00000548434 ERCC3P19447 782 aa19.24■□□□□ 0.67
RAPGEF3-217ENST00000548434 TMEM132BQ14DG7 1078 aa19.24■□□□□ 0.67
RAPGEF3-217ENST00000548434 SEC62Q99442 399 aaKnown RBP19.24■□□□□ 0.67
RAPGEF3-217ENST00000548434 PLXNA1Q9UIW2 1896 aa19.24■□□□□ 0.67
RAPGEF3-217ENST00000548434 COL6A3P12111 3177 aa19.23■□□□□ 0.67
RAPGEF3-217ENST00000548434 EVI5O60447 810 aa19.23■□□□□ 0.67
RAPGEF3-217ENST00000548434 GLRX3O76003 335 aaKnown RBP19.23■□□□□ 0.67
RAPGEF3-217ENST00000548434 ADORA2AP29274 412 aa19.23■□□□□ 0.67
RAPGEF3-217ENST00000548434 ZMYM1Q5SVZ6 1142 aa19.23■□□□□ 0.67
RAPGEF3-217ENST00000548434 OLFML2BQ68BL8 750 aa19.23■□□□□ 0.67
RAPGEF3-217ENST00000548434 ABRAQ8N0Z2 381 aa19.23■□□□□ 0.67
RAPGEF3-217ENST00000548434 GDF15Q99988 308 aa19.23■□□□□ 0.67
RAPGEF3-217ENST00000548434 TANGO6Q9C0B7 1094 aa19.23■□□□□ 0.67
RAPGEF3-217ENST00000548434 NYAP2Q9P242 653 aa19.23■□□□□ 0.67
RAPGEF3-217ENST00000548434 PATL2C9JE40 543 aaKnown RBP19.22■□□□□ 0.67
RAPGEF3-217ENST00000548434 CYBAP13498 195 aa19.22■□□□□ 0.67
RAPGEF3-217ENST00000548434 CCAR1Q8IX12 1150 aaKnown RBP19.22■□□□□ 0.67
RAPGEF3-217ENST00000548434 MKL1Q969V6 931 aa19.22■□□□□ 0.67
RAPGEF3-217ENST00000548434 C11orf49Q9H6J7 331 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms