RNA–Protein interactions for RNA: ENST00000548357.2

SNX29P1-201, Transcript of sorting nexin 29 pseudogene 1, humanhuman

BASIC

Gene SNX29P1, Length 1,007 nt, Biotype unprocessed pseudogene, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29P1-201ENST00000548357 MPHOSPH10O00566 681 aaKnown RBP18.42■□□□□ 0.54
SNX29P1-201ENST00000548357 AKR1B1P15121 316 aa18.42■□□□□ 0.54
SNX29P1-201ENST00000548357 USP14P54578 494 aa18.42■□□□□ 0.54
SNX29P1-201ENST00000548357 MAP2K5Q13163 448 aa18.42■□□□□ 0.54
SNX29P1-201ENST00000548357 WDR78Q5VTH9 848 aa18.42■□□□□ 0.54
SNX29P1-201ENST00000548357 LBX2Q6XYB7 198 aa18.42■□□□□ 0.54
SNX29P1-201ENST00000548357 GTF3C2Q8WUA4 911 aaPredicted RBP18.42■□□□□ 0.54
SNX29P1-201ENST00000548357 LRCH3Q96II8 777 aa18.42■□□□□ 0.54
SNX29P1-201ENST00000548357 CABP5Q9NP86 173 aa18.42■□□□□ 0.54
SNX29P1-201ENST00000548357 MCM3APO60318 1980 aa18.41■□□□□ 0.54
SNX29P1-201ENST00000548357 PTPREP23469 700 aa18.41■□□□□ 0.54
SNX29P1-201ENST00000548357 TMED8Q6PL24 325 aaPredicted RBP18.41■□□□□ 0.54
SNX29P1-201ENST00000548357 TRPV1Q8NER1 839 aa18.41■□□□□ 0.54
SNX29P1-201ENST00000548357 NBPF3Q9H094 633 aa18.41■□□□□ 0.54
SNX29P1-201ENST00000548357 RAB11FIP3O75154 756 aa18.4■□□□□ 0.54
SNX29P1-201ENST00000548357 HMMRO75330 724 aa18.4■□□□□ 0.54
SNX29P1-201ENST00000548357 COL6A1P12109 1028 aa18.4■□□□□ 0.54
SNX29P1-201ENST00000548357 ATP5JP18859 108 aa18.4■□□□□ 0.54
SNX29P1-201ENST00000548357 GRB14Q14449 540 aa18.4■□□□□ 0.54
SNX29P1-201ENST00000548357 CCAR1Q8IX12 1150 aaKnown RBP18.4■□□□□ 0.54
SNX29P1-201ENST00000548357 HAUS7Q99871 368 aa18.4■□□□□ 0.54
SNX29P1-201ENST00000548357 GDF15Q99988 308 aa18.4■□□□□ 0.54
SNX29P1-201ENST00000548357 RCAN3Q9UKA8 241 aa18.4■□□□□ 0.54
SNX29P1-201ENST00000548357 IGHA2P01877 340 aa18.39■□□□□ 0.53
SNX29P1-201ENST00000548357 MS4A1P11836 297 aa18.39■□□□□ 0.53
SNX29P1-201ENST00000548357 LRRC26Q2I0M4 334 aa18.39■□□□□ 0.53
SNX29P1-201ENST00000548357 MOV10L1Q9BXT6 1211 aaKnown RBP18.39■□□□□ 0.53
SNX29P1-201ENST00000548357 SLC15A5A6NIM6 579 aa18.38■□□□□ 0.53
SNX29P1-201ENST00000548357 CAPN2P17655 700 aa18.38■□□□□ 0.53
SNX29P1-201ENST00000548357 CYP2C19P33261 490 aa18.38■□□□□ 0.53
SNX29P1-201ENST00000548357 TSHZ3Q63HK5 1081 aa18.38■□□□□ 0.53
SNX29P1-201ENST00000548357 SPICE1Q8N0Z3 855 aa18.38■□□□□ 0.53
SNX29P1-201ENST00000548357 PUS7LQ9H0K6 701 aaKnown RBP18.38■□□□□ 0.53
SNX29P1-201ENST00000548357 CWC22Q9HCG8 908 aaKnown RBP18.38■□□□□ 0.53
SNX29P1-201ENST00000548357 MAGEA10P43363 369 aaPredicted RBP18.37■□□□□ 0.53
SNX29P1-201ENST00000548357 CDK8P49336 464 aa18.37■□□□□ 0.53
SNX29P1-201ENST00000548357 C12orf60Q5U649 245 aa18.37■□□□□ 0.53
SNX29P1-201ENST00000548357 TMEM179Q6ZVK1 233 aa18.37■□□□□ 0.53
SNX29P1-201ENST00000548357 TRMT44Q8IYL2 757 aaKnown RBP18.37■□□□□ 0.53
SNX29P1-201ENST00000548357 TANGO6Q9C0B7 1094 aa18.37■□□□□ 0.53
SNX29P1-201ENST00000548357 USP17L12C9JPN9 530 aa18.36■□□□□ 0.53
SNX29P1-201ENST00000548357 USP17L21D6R901 530 aa18.36■□□□□ 0.53
SNX29P1-201ENST00000548357 COBLO75128 1261 aa18.36■□□□□ 0.53
SNX29P1-201ENST00000548357 CCNA1P78396 465 aa18.36■□□□□ 0.53
SNX29P1-201ENST00000548357 ATG4CQ96DT6 458 aa18.36■□□□□ 0.53
SNX29P1-201ENST00000548357 HOXC6P09630 235 aa18.35■□□□□ 0.53
SNX29P1-201ENST00000548357 ADORA2AP29274 412 aa18.35■□□□□ 0.53
SNX29P1-201ENST00000548357 ICA1Q05084 483 aa18.35■□□□□ 0.53
SNX29P1-201ENST00000548357 COG2Q14746 738 aa18.35■□□□□ 0.53
SNX29P1-201ENST00000548357 CTR9Q6PD62 1173 aa18.35■□□□□ 0.53
SNX29P1-201ENST00000548357 C16orf86Q6ZW13 317 aa18.35■□□□□ 0.53
SNX29P1-201ENST00000548357 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.35■□□□□ 0.53
SNX29P1-201ENST00000548357 SPATC1LQ9H0A9 340 aa18.35■□□□□ 0.53
SNX29P1-201ENST00000548357 ATP8A2Q9NTI2 1148 aa18.35■□□□□ 0.53
SNX29P1-201ENST00000548357 FBXO28Q9NVF7 368 aa18.35■□□□□ 0.53
SNX29P1-201ENST00000548357 SWAP70Q9UH65 585 aa18.35■□□□□ 0.53
SNX29P1-201ENST00000548357 SLC4A4Q9Y6R1 1079 aa18.35■□□□□ 0.53
SNX29P1-201ENST00000548357 CYBAP13498 195 aa18.34■□□□□ 0.53
SNX29P1-201ENST00000548357 ERCC3P19447 782 aa18.34■□□□□ 0.53
SNX29P1-201ENST00000548357 DSG3P32926 999 aa18.34■□□□□ 0.53
SNX29P1-201ENST00000548357 UBE3CQ15386 1083 aa18.34■□□□□ 0.53
SNX29P1-201ENST00000548357 ANO1Q5XXA6 986 aa18.34■□□□□ 0.53
SNX29P1-201ENST00000548357 SAMD1Q6SPF0 538 aaPredicted RBP18.34■□□□□ 0.53
SNX29P1-201ENST00000548357 LRRCC1Q9C099 1032 aa18.34■□□□□ 0.53
SNX29P1-201ENST00000548357 VCPKMTQ9H867 229 aa18.34■□□□□ 0.53
SNX29P1-201ENST00000548357 TMX2Q9Y320 296 aa18.34■□□□□ 0.53
SNX29P1-201ENST00000548357 A0A1W2PPC1 479 aa18.33■□□□□ 0.52
SNX29P1-201ENST00000548357 EEF2P13639 858 aaKnown RBP18.33■□□□□ 0.52
SNX29P1-201ENST00000548357 BMP8BP34820 402 aa18.33■□□□□ 0.52
SNX29P1-201ENST00000548357 ATP2B2Q01814 1243 aa18.33■□□□□ 0.52
SNX29P1-201ENST00000548357 MFSD14CQ5VZR4 134 aa18.33■□□□□ 0.52
SNX29P1-201ENST00000548357 STK11IPQ8N1F8 1099 aa18.33■□□□□ 0.52
SNX29P1-201ENST00000548357 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.33■□□□□ 0.52
SNX29P1-201ENST00000548357 DDX20Q9UHI6 824 aaKnown RBP18.33■□□□□ 0.52
SNX29P1-201ENST00000548357 IVNS1ABPQ9Y6Y0 642 aa18.33■□□□□ 0.52
SNX29P1-201ENST00000548357 FLOT1O75955 427 aa18.32■□□□□ 0.52
SNX29P1-201ENST00000548357 GLRX3O76003 335 aaKnown RBP18.32■□□□□ 0.52
SNX29P1-201ENST00000548357 CNGA1P29973 690 aa18.32■□□□□ 0.52
SNX29P1-201ENST00000548357 TMEM132BQ14DG7 1078 aa18.32■□□□□ 0.52
SNX29P1-201ENST00000548357 PRAMEF19Q5SWL8 479 aa18.32■□□□□ 0.52
SNX29P1-201ENST00000548357 PLS1Q14651 629 aa18.31■□□□□ 0.52
SNX29P1-201ENST00000548357 OSBP2Q969R2 916 aa18.31■□□□□ 0.52
SNX29P1-201ENST00000548357 ARHGEF10LQ9HCE6 1279 aa18.31■□□□□ 0.52
SNX29P1-201ENST00000548357 EPB41L4AQ9HCS5 686 aaPredicted RBP18.31■□□□□ 0.52
SNX29P1-201ENST00000548357 LCTP09848 1927 aa18.3■□□□□ 0.52
SNX29P1-201ENST00000548357 GSG1L2A8MUP6 293 aa18.3■□□□□ 0.52
SNX29P1-201ENST00000548357 ATN1P54259 1190 aaPredicted RBP18.3■□□□□ 0.52
SNX29P1-201ENST00000548357 MDM2Q00987 491 aaPredicted RBP18.3■□□□□ 0.52
SNX29P1-201ENST00000548357 GJC2Q5T442 439 aaPredicted RBP18.3■□□□□ 0.52
SNX29P1-201ENST00000548357 Q7L0L9 218 aa18.3■□□□□ 0.52
SNX29P1-201ENST00000548357 NCAPG2Q86XI2 1143 aa18.3■□□□□ 0.52
SNX29P1-201ENST00000548357 SHCBP1Q8NEM2 672 aa18.3■□□□□ 0.52
SNX29P1-201ENST00000548357 LPAR1Q92633 364 aa18.3■□□□□ 0.52
SNX29P1-201ENST00000548357 STRBPQ96SI9 672 aaKnown RBP18.3■□□□□ 0.52
SNX29P1-201ENST00000548357 NUP88Q99567 741 aaPredicted RBP18.3■□□□□ 0.52
SNX29P1-201ENST00000548357 SENP6Q9GZR1 1112 aaPredicted RBP18.3■□□□□ 0.52
SNX29P1-201ENST00000548357 HOXC10Q9NYD6 342 aa18.3■□□□□ 0.52
SNX29P1-201ENST00000548357 EYSQ5T1H1 3165 aa18.3■□□□□ 0.52
SNX29P1-201ENST00000548357 A0A0C4DFX4 3053 aa18.3■□□□□ 0.52
SNX29P1-201ENST00000548357 M0R2C6 588 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms